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<strong>Warning:</strong> The NCBI web site requires JavaScript to function. <a href="//www.ncbi.nlm.nih.gov/corehtml/query/static/unsupported-browser.html#enablejs" title="Learn how to enable JavaScript" target="_blank">more...</a>
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Federal government websites often end in .gov or .mil. Before
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<span class="username desktop-only" aria-hidden="true" id="uname_short"></span>
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<span class="sr-only">Show account info</span>
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<h4>Account</h4>
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Logged in as:<br />
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<li><a id="account_pubs" href="/myncbi/collections/bibliography/" class="set-base-url" data-ga-action="click_menu_item" data-ga-label="account_pubs">Publications</a></li>
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<div role="navigation" aria-label="access keys">
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<a id="nws_header_accesskey_0" href="https://www.ncbi.nlm.nih.gov/guide/browsers/#ncbi_accesskeys" class="usa-sr-only" accesskey="0" tabindex="-1">Access keys</a>
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<a id="nws_header_accesskey_1" href="https://www.ncbi.nlm.nih.gov" class="usa-sr-only" accesskey="1" tabindex="-1">NCBI Homepage</a>
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<div class="header">
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<a href="/gap/phegeni" title="PheGenI main page"><img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3786730" alt="PheGenI Logo" /></a>
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</div>
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<div class="search"><form method="get" action="/gquery/"><div class="search_form"><label for="database" class="offscreen_noflow">Search database</label><select id="database"><option value="gquery" selected="selected">All Databases</option><option value="assembly">Assembly</option><option value="biocollections">Biocollections</option><option value="bioproject">BioProject</option><option value="biosample">BioSample</option><option value="books">Books</option><option value="clinvar">ClinVar</option><option value="cdd">Conserved Domains</option><option value="gap">dbGaP</option><option value="dbvar">dbVar</option><option value="gene">Gene</option><option value="genome">Genome</option><option value="gds">GEO DataSets</option><option value="geoprofiles">GEO Profiles</option><option value="gtr">GTR</option><option value="ipg">Identical Protein Groups</option><option value="medgen" data-ac_dict="medgen_disease_name">MedGen</option><option value="mesh" data-ac_dict="mesh_suggestions">MeSH</option><option value="nlmcatalog">NLM Catalog</option><option value="nuccore">Nucleotide</option><option value="omim">OMIM</option><option value="pmc">PMC</option><option value="protein">Protein</option><option value="proteinclusters">Protein Clusters</option><option value="protfam">Protein Family Models</option><option value="pcassay">PubChem BioAssay</option><option value="pccompound">PubChem Compound</option><option value="pcsubstance">PubChem Substance</option><option value="pubmed" data-ac_dict="pm_related_queries_2">PubMed</option><option value="snp">SNP</option><option value="sra">SRA</option><option value="structure">Structure</option><option value="taxonomy">Taxonomy</option><option value="toolkit">ToolKit</option><option value="toolkitall">ToolKitAll</option><option value="toolkitbookgh">ToolKitBookgh</option></select><div class="nowrap"><label for="term" class="offscreen_noflow" accesskey="/">Search term</label><div class="nowrap"><input type="text" name="term" id="term" title="Search All Databases" value="" class="jig-ncbiclearbutton jig-ncbiautocomplete" data-jigconfig="isEnabled:false,disableUrl:'NcbiSearchBarAutoComplCtrl'" autocomplete="off" data-sbconfig="ds:'no',pjs:'no',afs:'yes'" /></div><button id="search" type="submit" class="button_search nowrap" cmd="go">Search</button></div></div><input type="hidden" name="p$a" /><input type="hidden" name="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" value="gap" /><input name="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form></div>
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</div>
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<!-- was itemctrl -->
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<div class="content">
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<div xmlns:ncbi-portal="http://ncbi.gov/portal/XSLT/namespace" class="EpiSection div_summary" id="div_summary"><a class="bookmark" name="pgSUMMARY" id="pgSUMMARY"><img class="nada" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3456330" /></a>
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<h2 id="section_summary" class="sectionHdr secttitle"><a id="pgSUMMARYtoggler" href="#" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget SectionToggler"><span class="ui-ncbitoggler-master-text">Search Summary</span><span class="ui-icon ui-icon ui-icon-triangle-1-s"></span></a></h2>
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<div class="ui-ncbi-toggler-slave-open ui-widget"><h4>Search Criteria</h4><div class="indent bottomSpace"><h4>Genotype Selection - Genes</h4>
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||
<div class="indent">7227</div></div><div class="indent bottomSpace"><span class="EpiButton" onclick="PheGenI.ViewSection('pgForm')">Modify Search</span></div>
|
||
<h4>Search Results</h4>
|
||
<div class="indent bottomSpace">
|
||
<table id="resultsTable" class="datatbl nostripe notfixed">
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||
<tr id="result_assoc"><td><a href="#" class="hlinkPointer bold" title="Scroll to Association Results" onclick="PheGenI.ViewSection('pgGAP'); return false;">Association Results<img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1472313" /></a></td>
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||
<td id="counts_assoc"> <span class="small">Retrieving...</span> </td>
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||
<td id="search_assoc" class="disabled">Searched by gene IDs retrieved from gene search.</td>
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||
</tr>
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||
<tr id="result_gene"><td><a href="#" class="hlinkPointer bold" title="Scroll to Genes" onclick="PheGenI.ViewSection('pgGENE'); return false;">Genes<img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1472313" /></a></td>
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||
<td id="counts_GENE"><span class="counts">1 - 1 of 1</span></td>
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||
<td id="search_GENE">Searched by gene names and/or gene IDs.</td>
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||
</tr>
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||
<tr id="result_snp"><td><a href="#" class="hlinkPointer bold" title="Scroll to SNPs" onclick="PheGenI.ViewSection('pgSNP'); return false;">SNPs<img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1472313" /></a></td>
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||
<td id="counts_SNP"> <span class="small">Retrieving...</span> </td>
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||
<td id="search_SNP" class="disabled">Searched by gene symbols retrieved from gene search.</td>
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||
</tr>
|
||
<tr id="result_eqtl"><td><a href="#" class="hlinkPointer bold" title="Scroll to eQTL Data" onclick="PheGenI.ViewSection('pgeqtl'); return false;">eQTL Data<img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1472313" /></a></td>
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||
<td id="counts_eqtl"> <span class="small">Retrieving...</span> </td>
|
||
<td>Searched by gene IDs retrieved from gene search.</td>
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||
</tr>
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||
<tr id="result_gap"><td><a href="#" class="hlinkPointer bold" title="Scroll to dbGaP Studies" onclick="PheGenI.ViewSection('pgGapStudy'); return false;">dbGaP Studies<img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1472313" /></a></td>
|
||
<td id="counts_GAP"> <span class="small">Retrieving...</span> </td><td id="search_GAP" class="disabled">Searched by traits retrieved from page 1 of association results.</td>
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||
</tr>
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||
<tr id="result_SeqView"><td><a href="#" class="hlinkPointer bold" title="Scroll to Genome View" onclick="PheGenI.ViewSection('GenomeView'); return false;">Genome View<img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1472313" /></a></td>
|
||
<td colspan="2" id="counts_SeqView"> <span class="small">Retrieving...</span> </td>
|
||
</tr>
|
||
</table></div>
|
||
<div class="indent bottomSpace">
|
||
<a href="#" class="EpiButton" onclick="PheGenI.ViewSection('pgForm');return false;">Modify Search</a>
|
||
<span onclick="PheGenI.OpenAllSections(); PheGenI.DelayScroll('#pgSUMMARY');" title="Open all sections" class="EpiButton">Show All</span>
|
||
<span onclick="PheGenI.CloseAllSections(); PheGenI.DelayScroll();" title="Close all sections" class="EpiButton">Hide All</span>
|
||
</div>
|
||
</div>
|
||
</div><div class="EpiSection div_searchform" id="div_searchform"><!--
|
||
in SectionForm_xsl top of div
|
||
-->
|
||
<!--
|
||
|
||
<HttpRequest method="GET"><URL><AppName>gap</AppName><HostName>www.ncbi.nlm.nih.gov</HostName><Port>80</Port><Path><Seg pp="1">gap</Seg><Seg pp="2">phegeni</Seg></Path><AppURL>https://www.ncbi.nlm.nih.gov/gap</AppURL><BaseURL>https://www.ncbi.nlm.nih.gov</BaseURL><SelfURL>https://www.ncbi.nlm.nih.gov/gap/phegeni</SelfURL><ScriptURL>/gap</ScriptURL><PathURL>https://www.ncbi.nlm.nih.gov/gap/phegeni</PathURL><QueryString>tab=1&gene=7227</QueryString><ResourceURL>/phegeni?tab=1&gene=7227</ResourceURL><LiveMode>true</LiveMode></URL><Params><Param name="gene">7227</Param><Param name="tab">1</Param></Params><Cookies><Cookie name="bananadb-csrftoken">OeC2bqubkIVcFyPZdOhzL3UJRSw8HjHK</Cookie><Cookie name="bionlp-csrftoken">oaQVDCjQDwiDowAa4GuVBhnrGyY3wGJ6</Cookie><Cookie name="BlastCubbyImported">passive</Cookie><Cookie name="books.article.report"></Cookie><Cookie name="cogweb-csrftoken">SAQsDcPssqBoDPr4ibiBwezor7NHaNTB</Cookie><Cookie name="django-bibliography-csrftoken">9SQjCMsg4GT80MuodltONHYRdrsM7j20</Cookie><Cookie name="gdh-data-hub-csrftoken">3AxhEN47sylr7uwFPdQK5Q0eQXaMHBm1</Cookie><Cookie name="grc_web-csrftoken">xM9l3VYfZFbB3n6oK7kEsTRzP3e5sVt1</Cookie><Cookie name="histonedb-csrftoken">JSgvCR7HlRd84rmPq6jIU9hTGZevtiEW</Cookie><Cookie name="MyBlastUser">1NsdW_BGWVSRBLL5R25C33618</Cookie><Cookie name="ncbi_mutagene">eyJjc3JmX3Rva2VuIjoiN2I4MDkzZmFkZjYyMzZlNjNkZTI4YWQxN2IwMTU5ODlkZDdhYTE2YSJ9.Z8f_6A.ehyQQVjZr1wylrx7xkym3onZ8us</Cookie><Cookie name="ncbi_sid">CE8B5AF87C7FFCB1_0191SID</Cookie><Cookie name="orffinder-csrftoken">k5nxNFU0M4tFuQNQS5XQAcpGs8sOZjRe</Cookie><Cookie name="pmc-idconv-csrftoken">SB4FgkFG8J7YYrcX695RGL0C1pJcPV5o</Cookie><Cookie name="snpdelscore-csrftoken">RdIXL4oqi1F4XpHcCj6rUv786ekoy4p6</Cookie><Cookie name="trialgpt-csrftoken">RwzuHsDdzmdPR2syoGTmIJ8JiZ0VWW8W</Cookie><Cookie name="WebEnv">1T3V9vrskxoQ9Ggls2EQuloUCVrUuzZDeilrkaL3t7SQA@CE8B5AF87C7FFCB1_0191SID</Cookie></Cookies></HttpRequest>
|
||
|
||
/gap/phegeni
|
||
|
||
isOpen=0
|
||
|
||
ToggleClassDiv=ui-ncbi-toggler-slave EpiViewForm ui-widget
|
||
|
||
-->
|
||
<a class="bookmark" name="pgForm" id="pgForm"><img class="nada" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3456330" /></a>
|
||
<h2 id="section_searchform" class="sectionHdr secttitle"><span class="PheGenIHelpSpan"><a onclick="PheGenI.ViewSection('pgSUMMARY'); return false;" href="#" class="PheGenISummaryIcon" title="Go to summary section"><img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1482446" /></a></span><span class="PheGenIHelpSpan"><a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfosearch" href="#infosearch" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infosearch', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></span><a id="pgFormtoggler" href="#" class="jig-ncbitoggler ui-ncbitoggler ui-widget SectionToggler"><span class="ui-ncbitoggler-master-text">Search Criteria</span><span class="ui-icon ui-icon ui-icon-triangle-1-e"></span></a></h2>
|
||
<div class="ui-ncbi-toggler-slave EpiViewForm ui-widget"><form method="post" action="/gap/phegeni" name="EpiView" onsubmit="PheGenI.Validate(); return false;" id="EpiView"><div class="formButtons pPadTop2"><a title="Search database" class="EpiButton" href="#" onclick="PheGenI.Validate(); return false;">Search</a>
|
||
<a title="Clear search form" class="EpiButton" href="#" onclick="PheGenI.ClearForm();return false;">Clear</a>
|
||
<a class="jig-ncbipopper EpiButton exampleButton" href="#" data-jigconfig="destSelector: '#exampleSearch', openEvent: 'click', closeEvent: 'click', hasArrow: false, destPosition: 'top left', triggerPosition: 'bottom left', openAnimation: 'none', closeAnimation: 'none'">Examples...</a></div>
|
||
<input type="hidden" name="log_op" value="EpiviewForm" />
|
||
<input type="hidden" name="tab" value="1" />
|
||
<input type="hidden" name="from" value="" />
|
||
<input type="hidden" name="to" value="" />
|
||
<input type="hidden" name="sortGAP" value="P-A:Trait-A:Location-A:Source-A:" />
|
||
<input type="hidden" name="sectionOrder" value="" />
|
||
<input type="hidden" name="ideo.orien" value="" />
|
||
<input type="hidden" name="ideo.align" value="" />
|
||
<input type="hidden" name="ideo.gene" value="" />
|
||
<input type="hidden" name="ideo.snp" value="" />
|
||
<input type="hidden" name="ideo.loc" value="" />
|
||
<input type="hidden" name="ideo.data" value="" />
|
||
<input type="hidden" name="ideo.chrs" value="" />
|
||
<table class="tableFormSection"><tbody><tr>
|
||
<td><div class="formSection"><h4>Phenotype Selection<a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfopheno" href="#infopheno" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infopheno', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></h4><div class="formSectionDiv"><div class="bold">Traits:</div><div name="phenoTrait" class="jig-multitext indent" data-jigconfig="processKeys: true, dictionary: 'GapPlusAuto', 'class': 'jig-ncbiautocomplete', trim: true, cols: 60, rows: 8, maxrows: 200, unique: true, uniqueError: true, requireValidation: true" id="phenoTrait"></div><div class="DivEpiButton"><a class="jig-ncbidialog EpiButton" data-jigconfig="modal: true, closeOnEscape: true, draggable: true, resizable: true, open: PhenotypeBrowse.OnOpen, beforeClose: PhenotypeBrowse.OnClose, width: 'auto', destSelector: '#browsePhenotype'">Browse...</a></div><div style="clear:both;"><table class="nowrap">
|
||
<tbody><tr><td class="pPadTop " title="click here to enter a value" style="cursor: default;" onclick="document.forms.EpiView.elements.pv.focus(); return false;"><label for="idpv" class="bold">P-Value:</label> < 1 x 10</td>
|
||
<td class="pPadBottom">- <input id="idpv" class="expInput" type="text" maxlength="5" size="2" value="" name="pv" /></td>
|
||
<td class="bold pPadLeft pPadTop">Source:</td>
|
||
<td class="pPadLeft pPadTop"><select name="phenoSource"><option value="">[Any]</option><option value="1">dbGap</option><option value="2">NHGRI</option></select></td></tr></tbody></table>
|
||
</div></div></div></td>
|
||
<td><div class="formSection"><h4>Genotype Selection<a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfogeno" href="#infogeno" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infogeno', draggable: true, resizable: true, width: 580"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></h4><div class="jig-ncbitabs formSectionDiv" data-jigconfig="selected: 1" id="EpiViewTabs"><ul><li><a href="#EpiFormTab-0">Location</a></li><li><a href="#EpiFormTab-1">Gene</a></li><li><a href="#EpiFormTab-2">SNP</a></li></ul>
|
||
<div id="EpiFormTab-0" style="padding: 30px 12px 30px 12px;"><table><tr><td class="bold">Chromosome: </td><td><select name="chr"><option></option><option value="1">1</option>
|
||
<option value="2">2</option>
|
||
<option value="3">3</option>
|
||
<option value="4">4</option>
|
||
<option value="5">5</option>
|
||
<option value="6">6</option>
|
||
<option value="7">7</option>
|
||
<option value="8">8</option>
|
||
<option value="9">9</option>
|
||
<option value="10">10</option>
|
||
<option value="11">11</option>
|
||
<option value="12">12</option>
|
||
<option value="13">13</option>
|
||
<option value="14">14</option>
|
||
<option value="15">15</option>
|
||
<option value="16">16</option>
|
||
<option value="17">17</option>
|
||
<option value="18">18</option>
|
||
<option value="19">19</option>
|
||
<option value="20">20</option>
|
||
<option value="21">21</option>
|
||
<option value="22">22</option>
|
||
<option value="X">X</option>
|
||
<option value="Y">Y</option>
|
||
<option value="MT">MT</option>
|
||
</select></td></tr>
|
||
<tr><td class="bold"><label for="idfromto">Range (bps): </label></td><td><input id="idfromto" name="fromto" type="text" maxlength="60" size="24" value="" /></td></tr><tr><td></td><td class="small"> (from:to)</td></tr></table></div>
|
||
<div id="EpiFormTab-1"><div class="bold">Gene names or IDs:</div><textarea name="gene" wrap="hard" rows="4" cols="36" maxlength="5000">7227</textarea></div>
|
||
<div id="EpiFormTab-2"><div class="bold">SNP rs numbers:</div><textarea name="rs" wrap="hard" rows="4" cols="36" maxlength="5000"></textarea></div>
|
||
</div><div class="bold pPadTop">SNP Functional Class</div><div style="padding-left: 8pt;"><input class="checkbox" type="checkbox" name="fxn" id="idcheckexon" value="exon" /><label class="label" for="idcheckexon">exon</label><input class="checkbox" type="checkbox" name="fxn" id="idcheckintron" value="intron" /><label class="label" for="idcheckintron">intron</label><input class="checkbox" type="checkbox" name="fxn" id="idcheckneargene" value="neargene" /><label class="label" for="idcheckneargene">neargene</label><input class="checkbox" type="checkbox" name="fxn" id="idcheckUTR" value="UTR" /><label class="label" for="idcheckUTR">UTR</label>
|
||
<span title="Clear selection" onclick="ClearSelectMulti(document.forms.EpiView.elements.fxn)" class="EpiButtonSmall">Clear</span><span title="Invert selection" onclick="InvertSelectMulti(document.forms.EpiView.elements.fxn)" class="EpiButtonSmall">Invert</span></div></div></td></tr></tbody></table>
|
||
<div class="formButtons"><a title="Search database" class="EpiButton" href="#" onclick="PheGenI.Validate(); return false;">Search</a>
|
||
<a title="Clear search form" class="EpiButton" href="#" onclick="PheGenI.ClearForm();return false;">Clear</a>
|
||
<a class="jig-ncbipopper EpiButton exampleButton" href="#" data-jigconfig="destSelector: '#exampleSearch', openEvent: 'click', closeEvent: 'click', hasArrow: false, destPosition: 'top left', triggerPosition: 'bottom left', openAnimation: 'none', closeAnimation: 'none'">Examples...</a></div><span class="hideText"><a title="Hide debugging info" href="#" onclick="HideDebug(); return false;">hide</a><a title="Show debugging info" href="#" onclick="ShowDebug(); return false;">show</a></span><input type="submit" style="display: none" onclick="return PheGenI.Validate();" /><input type="hidden" name="p$a" /><input type="hidden" name="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" value="gap" /><input name="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form>
|
||
</div>
|
||
|
||
<span style="display: none;">
|
||
<form method="post" action="/gap/phegeni" name="PheGenIdownload" id="PheGenIdownload">
|
||
<input type="hidden" name="gene" value="7227" />
|
||
<input type="hidden" name="tab" value="1" />
|
||
<input type="hidden" name="type" value="text" />
|
||
<input type="hidden" name="data" value="SNP" />
|
||
<input type="hidden" name="log_op" value="download" />
|
||
<input type="hidden" name="sortGAP" value="" />
|
||
<input type="hidden" name="p$a" /><input type="hidden" name="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" value="gap" /><input name="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form>
|
||
</span>
|
||
|
||
<div class="ui-ncbidialog-dest" title="Search Criteria" id="infosearch">Enter search criteria using the controls below. Use the label or arrow on the left to hide / show any section. Small arrows at the far right side of each section heading to move the section above or below an adjacent section.</div>
|
||
<div class="ui-ncbidialog-dest" title="Phenotype Selection" id="infopheno"><span>Enter the name of any trait or disease and a window will appear with a list of suggestions. Currently, phenotypes are matched to exact MeSH terms; parent, child and synonyms are not indexed. If you wish to narrow your search by category, click on the </span><span class="EpiButton Help">Browse...</span><span> button. When more than one trait is selected, the search results will include records that match any of the selected traits. You may also limit the P-value for the Association Results and eQTL data to be less than the specified value.</span></div>
|
||
<div class="ui-ncbidialog-dest" title="Category Selection" id="infocategory">Select broad trait category to limit the items shown in the trait selection.</div>
|
||
<div class="ui-ncbidialog-dest" title="Trait Selection" id="infotrait">Select trait for search. Selection of a trait will limit the trait categories shown above.</div>
|
||
<div class="ui-ncbidialog-dest" title="Association Results" id="infoassoc">Data shown are compiled from both NHGRI GWAS Catalog (Source = NHGRI) and from most significant hits across analyses submitted to dbGaP.</div>
|
||
<div class="ui-ncbidialog-dest" title="Genes" id="infogenes">Data shown are selected columns matching search criteria, taken directly from NCBI Gene.</div>
|
||
<div class="ui-ncbidialog-dest" title="SNPs" id="infosnps">Data shown are selected columns matching search criteria, taken directly from Entrez dbSNP.</div>
|
||
<div class="ui-ncbidialog-dest" title="GTEX Data" id="infogtex">Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser. This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes. This effort originated with the <a style="text-decoration: underline;" href="https://commonfund.nih.gov/GTEx/" target="_blank">NIH GTEx roadmap project;</a> however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.</div><div class="ui-ncbidialog-dest" title="eQTL Data" id="infoeqtl">Data shown are molecular QTL datasets extracted from the NCBI molQTL resource (coming soon) by matching search criteria.</div><div class="ui-ncbidialog-dest" title="dbGaP Studies" id="infogap">Data shown are selected dbGaP study information related to the trait information in the Association Results. Each study name is hyperlinked to the corresponding dbGaP study page where the user can apply for authorized access to individual-level data.</div><div class="ui-ncbidialog-dest" title="Genome View" id="infosequence">The ideogram view is shown for all genomic locations specified in the search which span regions with SNP and Gene Results.<br /><br />The orientation can be selected as vertical, horizontal, or the default can be used. The default is horizontal if one chromosome is displayed and vertical otherwise.<br /><br />
|
||
The user has the option of including SNPs and or Genes in the display. If the search criteria include a location it can also be displayed.<br /><br />
|
||
The 'Display' option is either the current subset of the SNPs and Genes displayed on the page (<i>e.g.</i>, 1 - 50 of 75) or those from all Association Results (<i>e.g.</i>, all 75) including those that do not appear in the current page of the Association Results table. Due to the potential volume of data, the latter option is available only if a phenotype trait was selected in the initial search.<br /></div>
|
||
<div class="ui-ncbidialog-dest" title="Genotype Selection" id="infogeno"><span>Genetic location may be specified in one of three ways:
|
||
<ol>
|
||
<li><b>Location</b>: chromosome and range (position on chromosome)
|
||
<div style="margin-left: 12pt;">Range is specified as two numbers in multiple formats by a space, hyphen, or comma. The following examples are equivalent:<div style="margin-left: 12pt;">1000000:10000000<br />
|
||
1M-10M<br />
|
||
1000K 10000K</div></div></li>
|
||
<li><b>Gene</b>: One or more gene symbols or NCBI Gene IDs separated by spaces, commas, or on separate lines.</li>
|
||
<li><b>SNP</b>: One or more dbSNP rs numbers separated by spaces, commas, or on separate lines. The 'rs' prefix is optional.</li></ol><br />
|
||
You may optionally select one or more SNP functional classes. If none are selected, then all functional classes are included including 'intergenic.'<br />
|
||
This entire section is optional if a category and/or trait are selected in the phenotype selection.</span></div>
|
||
<div class="ui-ncbidialog-dest ui-corner-all" title="Phenotype Selection" id="browsePhenotype"><form onsubmit="return false;" name="browsePhenotypeForm" action="/gap" enctype="application/x-www-form-urlencoded" method="post" id="browsePhenotypeForm"><div class="bold">Category:</div><div><select name="browseCategory"></select></div><div class="pPadTop"><span class="bold">Available Traits: </span><a class="EpiButtonSmall" href="#" id="browseClear" title="Clear selection">Clear</a><a class="EpiButtonSmall" href="#" id="browseInvert" title="InvertSelection">Invert</a></div><div><select name="browseTrait" id="browseTrait" multiple="multiple" size="8"></select></div><div class="DivEpiButton"><a class="EpiButton" href="#" id="browsePhenoAppend" title="Add selected items to trait list below">Add traits</a></div><div class="bold">Selected Traits:</div><div name="selectedTraits" class="jig-multitext indent" data-jigconfig="processKeys: true, readonly: 1, trim: true, cols: 60, rows: 8, maxrows: 200, unique: true, uniqueError: true" id="selectedTraits"></div><div class="DivEpiButton"><a class="EpiButton" href="#" id="browsePhenoApply">Apply</a><a class="EpiButton" href="#" id="browsePhenoCancel">Cancel</a></div><input type="hidden" name="p$a" /><input type="hidden" name="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" value="gap" /><input name="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form></div><div id="exampleSearch" style="display: none;"><div class="popMenuItem" onclick="PheGenI.CloseExampleMenu();PheGenI.AddTrait('Celiac Disease',true); PheGenI.PromptExample(); return false;">Celiac Disease</div><div class="popMenuItem" onclick="PheGenI.CloseExampleMenu();PheGenI.SetGenes('CDKAL1',true); PheGenI.PromptExample(); return false;">Gene Search: CDKAL1</div><div class="popMenuItem" onclick="PheGenI.CloseExampleMenu();PheGenI.SetLoc('6','26M 33M',true); PheGenI.PromptExample(); return false;">Location: MHC region</div></div></div><div id="div_gene" class="EpiSection div_gene"><a class="bookmark" name="pgGENE" id="pgGENE"><img class="nada" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3456330" /></a>
|
||
<h2 id="section_gene" class="sectionHdr secttitle"><span class="PheGenIHelpSpan"><a onclick="PheGenI.ViewSection('pgSUMMARY'); return false;" href="#" class="PheGenISummaryIcon" title="Go to summary section"><img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1482446" /></a></span><span class="PheGenIHelpSpan"><a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfogenes" href="#infogenes" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infogenes', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></span><a id="pgGENEtoggler" href="#" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget SectionToggler"><span class="ui-ncbitoggler-master-text">Genes</span><span class="ui-icon ui-icon ui-icon-triangle-1-s"></span></a></h2>
|
||
<div class="ui-ncbi-toggler-slave-open ui-widget"><div class="EpiViewPageForm">
|
||
<span class="counts">1 - 1 of <a title="Search Gene Database" href="/gene?term=(7227%5Buid%5D)%209606%5Btaxid%5D%20alive%5BProperties%5D" target="_blank">1</a></span><a title="Download up to 2000 records as tab delimited text." style="margin-left: 12pt; margin-right: 4pt;" class="EpiButton" onclick="return PheGenI.DownloadText('GeneText_L')" href="#">Download</a>
|
||
<a href="#" class="EpiButton" onclick="PheGenI.ViewSection('pgForm');return false;">Modify Search</a></div><div class="showHide"><a class="EpiButton" href="#" onclick="PheGenI.ToggleGeneAll('open'); return false;">Open All</a> <a class="EpiButton" href="#" onclick="PheGenI.ToggleGeneAll('close'); return false;">Close All</a></div><table class="geneList datatbl"><thead><tr><th class="alignRight">#</th><th>Symbol</th><th>Description</th><th colspan="2">Location</th><th>OMIM</th><th class="empty"></th></tr></thead><tbody>
|
||
<tr id="rowGene_7227" class="geneRow"><td id="toggleGene_7227" class="sectionHdr3 alignRight"><a toggles="toggle7227" href="#" class="jig-ncbitoggler ui-ncbitoggler ui-widget"><span class="ui-ncbitoggler-master-text">1</span><span><span class="ui-icon ui-icon-triangle-1-e"></span></span></a></td>
|
||
<td class="geneSymbol"><a target="_blank" title="NCBI Gene" href="//www.ncbi.nlm.nih.gov/gene/7227">TRPS1</a></td><td>transcriptional repressor GATA binding 1</td>
|
||
<td class="noRight bold"><a href="#seqView" onclick="PheGenI.RebuildSeqView('NC_000008.11', 115668975, 115408496, 'TRPS1', 'transcriptional repressor GATA binding 1'); return true;" title="Update Sequence Display">8</a></td>
|
||
<td class="noLeft"><a href="#seqView" onclick="PheGenI.RebuildSeqView('NC_000008.11', 115668975, 115408496, 'TRPS1', 'transcriptional repressor GATA binding 1'); return true;" title="Update Sequence Display">: 115,668,975 - 115,408,496</a></td><td><a href="/omim/604386" target="_blank">604386</a></td><td class="empty"></td></tr>
|
||
<tr class="geneSummaryRow"><td colspan="7"><div class="ui-ncbi-toggler-slave ui-widget geneDiv" id="toggle7227"><table class="geneTable"><tbody>
|
||
<tr><td class="bold">Aliases:</td>
|
||
<td>GC79, LGCR</td></tr><tr><td class="bold">Summary:</td>
|
||
<td>This gene encodes a transcription factor that represses GATA-regulated genes and binds to a dynein light chain protein. Binding of the encoded protein to the dynein light chain protein affects binding to GATA consensus sequences and suppresses its transcriptional activity. Defects in this gene are a cause of tricho-rhino-phalangeal syndrome (TRPS) types I-III. [provided by RefSeq, Jul 2008]</td></tr>
|
||
</tbody></table></div></td></tr>
|
||
<tr><td colspan="6" class="bottomRow"></td><td class="empty"></td></tr></tbody></table><span class="JSON">
|
||
{
|
||
"section": "GENE",
|
||
"summary": "1 - 1 of 1",
|
||
"retstart": 0,
|
||
"pageSize": 100,
|
||
"count": 1,<!--chromosomes:
|
||
8-->
|
||
"SEQ":
|
||
{
|
||
"chr":
|
||
[
|
||
["8", 115408496, 115668975]
|
||
],
|
||
"markers":
|
||
{
|
||
"8":
|
||
[
|
||
["TRPS1", "NC_000008.11", 115408496, 115668975, "transcriptional repressor GATA binding 1", "GC79, LGCR", 7227]
|
||
]
|
||
},
|
||
"unmapped":
|
||
[
|
||
]
|
||
}
|
||
}
|
||
</span></div></div><div id="div_SeqView" class="EpiSection div_SeqView"><a class="bookmark" name="GenomeView" id="GenomeView"><img class="nada" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3456330" /></a>
|
||
<h2 id="section_SeqView" class="sectionHdr secttitle"><span class="PheGenIHelpSpan"><a onclick="PheGenI.ViewSection('pgSUMMARY'); return false;" href="#" class="PheGenISummaryIcon" title="Go to summary section"><img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1482446" /></a></span><span class="PheGenIHelpSpan"><a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfosequence" href="#infosequence" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infosequence', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></span><a id="GenomeViewtoggler" href="#" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget SectionToggler"><span class="ui-ncbitoggler-master-text">Genome View</span><span class="ui-icon ui-icon ui-icon-triangle-1-s"></span></a></h2>
|
||
<div id="idGraphic" class="ui-ncbi-toggler-slave-open ui-widget SeqViewerDiv"><span id="IdeoDataShow"><div id="IdeoForm"><form name="IDEO" action="/gap/phegeni" id="IDEO"><h4 class="bottomSpace">Ideogram Setup<a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfosequence" href="#infosequence" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infosequence', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></h4><div class="indent"><div class="floatLeft padRight" id="ideoForm">
|
||
<div class="bottomSpace"><span class="bold">Orientation: </span>
|
||
<select class="labeled" name="ideo.orien">
|
||
<option value="">Select</option>
|
||
<option value="vertical">Vertical</option>
|
||
<option value="horizontal">Horizontal</option>
|
||
</select></div>
|
||
|
||
<div class="bottomSpace">
|
||
<span class="bold">Include: </span><input type="checkbox" class="checkbox" value="1" name="ideo.gene" id="ideo.gene" /><label for="ideo.gene"><img alt="Gene symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3573587" class="symbol" /> Genes</label>
|
||
<input type="checkbox" class="checkbox" value="1" name="ideo.snp" id="ideo.snp" /><label for="ideo.snp"><img alt="SNP symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3763509" class="symbol" /> SNPs</label>
|
||
<input type="checkbox" class="checkbox" value="1" name="ideo.loc" id="ideo.loc" /><label for="ideo.loc" id="ideoLocation"><img alt="Location symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/2460592" class="symbol" /> Location</label></div>
|
||
<div class="bottomSpace">
|
||
<span class="bold">Display: </span><select name="ideo.data" onchange="return PheGenIIdeo.OnDataChange()">
|
||
<option value="page">Current Subset</option>
|
||
<option value="assoc">All Association Results</option>
|
||
</select></div>
|
||
<div class="bottomSpace">
|
||
<span class="bold">Chromosomes: </span><select name="ideo.chrs">
|
||
<option value="all">All</option>
|
||
<option value="used">Annotated</option>
|
||
</select></div>
|
||
<div class="bottomSpace"><span style="margin-right: 1em;" class="EpiButton" onclick="PheGenIIdeo.Build(1)">Update</span><span class="EpiButton" onclick="PheGenIIdeo.ShowDownload()">Download</span></div>
|
||
</div><div class="bottomSpace normalSize"><div class="bold">Summary</div><div id="GenomeViewSummary"></div><div><table class="ideoLegend"><thead><tr><th>SNP</th><th>Gene</th><th class="right">Count</th><th class="loc" colspan="2">Location bps</th></tr></thead><tbody><tr><td class="symbol"><img alt="SNP symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3762865" /></td><td class="symbol"><img alt="Gene symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3762861" /></td><td class="right">1 SNP or gene</td><td class="symbol loc"><img alt="Location symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/2460592" /></td><td class="loc">less than 2M bps</td></tr><tr><td class="symbol"><img alt="SNP symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3763509" /></td><td class="symbol"><img alt="Gene symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3573587" /></td><td class="right">2 - 10 SNPs or genes</td><td class="symbol loc"><img alt="Location symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3762864" /></td><td class="loc">at least 2M bps</td></tr><tr><td class="symbol"><img alt="SNP symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3762866" /></td><td class="symbol"><img alt="Gene symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3762862" /></td><td class="right">11 - 20 SNPs or genes</td><td class="loc" colspan="2" rowspan="2"> </td></tr><tr><td class="symbol"><img alt="SNP symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3762867" /></td><td class="symbol"><img alt="Gene symbol" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3762863" /></td><td class="right">more than 20 SNPs or genes</td></tr></tbody></table></div></div><div class="clearBoth"></div></div><input type="hidden" name="log_op" value="IdeogramAssocJSON" /><input type="hidden" name="p$a" /><input type="hidden" name="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" value="gap" /><input name="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form></div><div id="ideo-box">Creating ideogram...</div>
|
||
<div class="pPadTop"><a name="seqView" class="tiny" id="seqView"> </a></div>
|
||
<div id="SeqViewerParent"><div id="SeqViewer0" class="SeqViewerApp" style="display: none;"></div><div id="app-frontpage" style="display: none;"></div>Click on ideogram annotation to show sequence display</div></span><span id="IdeoDataNone">No data found.</span><div id="ideo-popup"></div></div></div><div id="div_assoc" class="EpiSection div_assoc"><a class="bookmark" name="pgGAP" id="pgGAP"><img class="nada" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3456330" /></a>
|
||
<h2 id="section_assoc" class="sectionHdr secttitle"><span class="PheGenIHelpSpan"><a onclick="PheGenI.ViewSection('pgSUMMARY'); return false;" href="#" class="PheGenISummaryIcon" title="Go to summary section"><img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1482446" /></a></span><span class="PheGenIHelpSpan"><a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfoassoc" href="#infoassoc" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infoassoc', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></span><a id="pgGAPtoggler" href="#" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget SectionToggler"><span class="ui-ncbitoggler-master-text">Association Results</span><span class="ui-icon ui-icon ui-icon-triangle-1-s"></span></a></h2>
|
||
<div class="ui-ncbi-toggler-slave-open ui-widget"><span class="PheGenISection"><form method="post" class="ajax" action="/gap/phegeni" name="ajaxAssoc" id="ajaxAssoc">
|
||
<input type="hidden" name="p$layout" value="AssocTable_L" />
|
||
<input type="hidden" name="phenoTrait" value="" />
|
||
<input type="hidden" name="phenoCategory" value="" />
|
||
<input type="hidden" name="phenoSource" value="" />
|
||
<input type="hidden" name="from" value="" />
|
||
<input type="hidden" name="to" value="" />
|
||
<input type="hidden" name="chr" value="" />
|
||
<input type="hidden" name="rs" value="" />
|
||
<input type="hidden" name="geneId" value="7227 " />
|
||
<input type="hidden" name="pgGAP" value="" />
|
||
<input type="hidden" name="pgz" value="50" />
|
||
<input type="hidden" name="sortGAP" value="" />
|
||
<input type="hidden" name="fxn" value="" />
|
||
<input type="hidden" name="pv" value="" />
|
||
<input type="hidden" name="p$a" /><input type="hidden" name="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" value="gap" /><input name="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form>
|
||
<img class="loading" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1883249" /></span></div></div><div id="div_snp" class="EpiSection div_snp"><a class="bookmark" name="pgSNP" id="pgSNP"><img class="nada" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3456330" /></a>
|
||
<h2 id="section_snp" class="sectionHdr secttitle"><span class="PheGenIHelpSpan"><a onclick="PheGenI.ViewSection('pgSUMMARY'); return false;" href="#" class="PheGenISummaryIcon" title="Go to summary section"><img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1482446" /></a></span><span class="PheGenIHelpSpan"><a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfosnps" href="#infosnps" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infosnps', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></span><a id="pgSNPtoggler" href="#" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget SectionToggler"><span class="ui-ncbitoggler-master-text">SNPs</span><span class="ui-icon ui-icon ui-icon-triangle-1-s"></span></a></h2>
|
||
<div class="ui-ncbi-toggler-slave-open ui-widget"><span class="PheGenISection"><form method="post" class="ajax" action="/gap/phegeni" name="ajaxSNP" id="ajaxSNP">
|
||
<input type="hidden" name="p$layout" value="SNPTable_L" />
|
||
<input type="hidden" name="term" value="(TRPS1[gene]) Homo sapiens[organism] " />
|
||
<input type="hidden" name="p$a" /><input type="hidden" name="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" value="gap" /><input name="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form>
|
||
<img class="loading" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1883249" /></span></div></div><div id="div_eqtl" class="EpiSection div_eqtl"><a class="bookmark" name="pgeqtl" id="pgeqtl"><img class="nada" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3456330" /></a>
|
||
<h2 id="section_eqtl" class="sectionHdr secttitle"><span class="PheGenIHelpSpan"><a onclick="PheGenI.ViewSection('pgSUMMARY'); return false;" href="#" class="PheGenISummaryIcon" title="Go to summary section"><img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1482446" /></a></span><span class="PheGenIHelpSpan"><a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfoeqtl" href="#infoeqtl" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infoeqtl', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></span><a id="pgeqtltoggler" href="#" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget SectionToggler"><span class="ui-ncbitoggler-master-text">eQTL Data</span><span class="ui-icon ui-icon ui-icon-triangle-1-s"></span></a></h2>
|
||
<div class="ui-ncbi-toggler-slave-open ui-widget"><span class="PheGenISection"><form method="post" class="ajax" action="/gap/phegeni" name="ajaxeqtl" id="ajaxeqtl">
|
||
<input type="hidden" name="p$layout" value="eQTLTable_L" />
|
||
<input type="hidden" name="assoc_P" value="" />
|
||
<input type="hidden" name="SNP_id" value="" />
|
||
<input type="hidden" name="symbol" value="7227 " />
|
||
<input type="hidden" name="probe_chr" value="" />
|
||
<input type="hidden" name="probe_bp" value="" />
|
||
<input type="hidden" name="probe_bp2" value="" />
|
||
<input type="hidden" name="page" value="1" />
|
||
<input type="hidden" name="pgz" value="50" />
|
||
<input type="hidden" name="p$debugoutput" value="off" />
|
||
<input type="hidden" name="p$a" /><input type="hidden" name="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" value="gap" /><input name="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form>
|
||
<img class="loading" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1883249" /></span></div></div><div id="div_gap" class="EpiSection div_snp"><a class="bookmark" name="pgGapStudy" id="pgGapStudy"><img class="nada" src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/3456330" /></a>
|
||
<h2 id="section_gap" class="sectionHdr secttitle"><span class="PheGenIHelpSpan"><a onclick="PheGenI.ViewSection('pgSUMMARY'); return false;" href="#" class="PheGenISummaryIcon" title="Go to summary section"><img src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1482446" /></a></span><span class="PheGenIHelpSpan"><a onclick="return PheGenI.CloseAllInfo(this);" id="linkinfogap" href="#infogap" title="" class="PheGenIHelpIcon jig-ncbidialog" data-jigconfig="destSelector: '#infogap', draggable: true, resizable: true"><img title="Get information." alt="Get information." src="//static.pubmed.gov/portal/portal3rc.fcgi/4194647/img/1399235" /></a></span><a id="pgGapStudytoggler" href="#" class="jig-ncbitoggler-open ui-ncbitoggler-open ui-widget SectionToggler"><span class="ui-ncbitoggler-master-text">dbGaP Studies</span><span class="ui-icon ui-icon ui-icon-triangle-1-s"></span></a></h2>
|
||
<div class="ui-ncbi-toggler-slave-open ui-widget"><div style="padding-bottom: 40px;">
|
||
<form name="pgGapStudy" method="post" action="/gap/phegeni" id="pgGapStudy">
|
||
<input type="hidden" name="p$layout" value="GapTable_L" />
|
||
<input type="hidden" name="term" value="" />
|
||
<input type="hidden" name="pgGapStudy" value="" />
|
||
<input type="hidden" name="p$a" id="p$a" /><input type="hidden" name="p$l" id="p$l" value="HtmlPage_L" /><input type="hidden" name="p$st" id="p$st" value="gap" /><input name="SessionId" id="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" id="Snapshot" value="/projects/dbGap/Epiview/EpiView@4.17" disabled="disabled" type="hidden" /></form>
|
||
</div></div></div>
|
||
</div>
|
||
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<span id="breadcrumb_text"><a href="/guide/">NCBI</a><span> > <a href="/guide/genetics-medicine/">Genetics & Medicine</a> > <a href="https://www.ncbi.nlm.nih.gov/gap/phegeni?tab=1&gene=7227">Phenotype & Genotype Integrator (PheGenI)</a></span></span></div>
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<a id="help-desk-link" class="help_desk jig-ncbihelpwindow" target="_blank" href="https://support.ncbi.nlm.nih.gov/ics/support/default.asp?style=classic&deptID=28049&Snapshot=%2Fprojects%2FdbGap%2FEpiview%2FEpiView@4.17&Time=2025-03-15T10:06:41-04:00&Host=portal104&ncbi_phid=CE8BA2ED7D5840210000000000540047&ncbi_session=CE8B5AF87C7FFCB1_0191SID&from=https%3A%2F%2Fwww.ncbi.nlm.nih.gov%2Fgap%2Fphegeni">Support Center</a>
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