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<a href="#pub-methods">Public Member Functions</a> &#124;
<a href="#pub-static-methods">Static Public Member Functions</a> &#124;
<a href="#pri-types">Private Types</a> &#124;
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<a class="el" href = "https://www.ncbi.nlm.nih.gov/toolkitbookgh/?term=CPCRPrimerSeq">Search Toolkit Book for <i>CPCRPrimerSeq</i></a>
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<p><code>#include &lt;<a class="el" href="PCRPrimerSeq_8hpp_source.html">objects/seqfeat/PCRPrimerSeq.hpp</a>&gt;</code></p>
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<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
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<tr class="memitem:a6b859237dcf106d77c9243c087018436"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classCPCRPrimerSeq.html#a6b859237dcf106d77c9243c087018436">CPCRPrimerSeq</a> (<a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">std::string</a> &amp;<a class="el" href="pcre2posix__test_8c.html#a10762cf48bbb586e6ed4c362c27169e8">data</a>)</td></tr>
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<tr class="inherit_header pub_methods_classCPCRPrimerSeq__Base"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classCPCRPrimerSeq__Base')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classCPCRPrimerSeq__Base.html">CPCRPrimerSeq_Base</a></td></tr>
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-static-methods"></a>
Static Public Member Functions</h2></td></tr>
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Private Types</h2></td></tr>
<tr class="memitem:af3ca724a0480774b9e3d48978352c4e0"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCPCRPrimerSeq__Base.html">CPCRPrimerSeq_Base</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classCPCRPrimerSeq.html#af3ca724a0480774b9e3d48978352c4e0">Tparent</a></td></tr>
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Additional Inherited Members</h2></td></tr>
<tr class="inherit_header pub_types_classCAliasBase"><td colspan="2" onclick="javascript:toggleInherit('pub_types_classCAliasBase')"><img src="closed.png" alt="-"/>&#160;Public Types inherited from <a class="el" href="classCAliasBase.html">CAliasBase&lt; string &gt;</a></td></tr>
<tr class="memitem:ga5ed09c7d517729fd1ccd02f0e57f64e8 inherit pub_types_classCAliasBase"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classCAliasBase.html">CAliasBase</a>&lt; <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#ga5ed09c7d517729fd1ccd02f0e57f64e8">TThis</a></td></tr>
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<tr class="memitem:gaf1d3f8f8c7f575c966af76e059e7814e inherit pro_attribs_classCAliasBase"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="group__GenClassSupport.html#gaf1d3f8f8c7f575c966af76e059e7814e">m_Data</a></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock">
<p class="definition">Definition at line <a class="el" href="PCRPrimerSeq_8hpp_source.html#l00053">53</a> of file <a class="el" href="PCRPrimerSeq_8hpp_source.html">PCRPrimerSeq.hpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#af3ca724a0480774b9e3d48978352c4e0">&#9670;&nbsp;</a></span>Tparent</h2>
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<td class="memname">typedef <a class="el" href="classCPCRPrimerSeq__Base.html">CPCRPrimerSeq_Base</a> <a class="el" href="classCPCRPrimerSeq.html#af3ca724a0480774b9e3d48978352c4e0">CPCRPrimerSeq::Tparent</a></td>
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<p class="definition">Definition at line <a class="el" href="PCRPrimerSeq_8hpp_source.html#l00055">55</a> of file <a class="el" href="PCRPrimerSeq_8hpp_source.html">PCRPrimerSeq.hpp</a>.</p>
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<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#a966489e4e91ecd337b625b823048715a">&#9670;&nbsp;</a></span>CPCRPrimerSeq() <span class="overload">[1/2]</span></h2>
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<td class="memname">CPCRPrimerSeq::CPCRPrimerSeq </td>
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<p class="definition">Definition at line <a class="el" href="PCRPrimerSeq_8hpp_source.html#l00057">57</a> of file <a class="el" href="PCRPrimerSeq_8hpp_source.html">PCRPrimerSeq.hpp</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a6b859237dcf106d77c9243c087018436">&#9670;&nbsp;</a></span>CPCRPrimerSeq() <span class="overload">[2/2]</span></h2>
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<td class="memname">CPCRPrimerSeq::CPCRPrimerSeq </td>
<td>(</td>
<td class="paramtype"><a class="el" href="zconf__cf_8h.html#a2c212835823e3c54a8ab6d95c652660e">const</a> <a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">std::string</a> &amp;&#160;</td>
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<p>Explicit constructor from the primitive type. </p>
<p class="definition">Definition at line <a class="el" href="PCRPrimerSeq_8hpp_source.html#l00060">60</a> of file <a class="el" href="PCRPrimerSeq_8hpp_source.html">PCRPrimerSeq.hpp</a>.</p>
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<h2 class="groupheader">Member Function Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#ad18dbcc0c2fe0b86a4ece634d8a7c6a6">&#9670;&nbsp;</a></span>Clean()</h2>
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<td class="memname">void CPCRPrimerSeq::Clean </td>
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<p class="definition">Definition at line <a class="el" href="PCRPrimerSeq_8cpp_source.html#l00087">87</a> of file <a class="el" href="PCRPrimerSeq_8cpp_source.html">PCRPrimerSeq.cpp</a>.</p>
<p class="reference">References <a class="el" href="ncbistr_8cpp_source.html#l03396">NStr::ReplaceInPlace()</a>, <a class="el" href="PCRPrimerSeq_8cpp_source.html#l00052">s_EraseSpacesOutsideBrackets()</a>, and <a class="el" href="ncbistr_8cpp_source.html#l00405">NStr::ToLower()</a>.</p>
<p class="reference">Referenced by <a class="el" href="newcleanupp_8cpp_source.html#l01550">CNewCleanup_imp::BiosourceBC()</a>, <a class="el" href="pcr__primers__panel_8cpp_source.html#l00540">CPCRPrimerEntry::TransferDataFromWindow()</a>, and <a class="el" href="newcleanupp_8cpp_source.html#l08395">CNewCleanup_imp::x_PCRPrimerSetBC()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#abb4fee9c0a050e58ed1ca9d2e2fbd51f">&#9670;&nbsp;</a></span>Fixi()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CPCRPrimerSeq::Fixi </td>
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<td class="paramtype"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &amp;&#160;</td>
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<p class="definition">Definition at line <a class="el" href="PCRPrimerSeq_8cpp_source.html#l00238">238</a> of file <a class="el" href="PCRPrimerSeq_8cpp_source.html">PCRPrimerSeq.cpp</a>.</p>
<p class="reference">References <a class="el" href="lex_8newick_8cpp_source.html#l01456">i</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l00133">NPOS</a>, and <a class="el" href="introspection__html_8hpp_source.html#l00126">orig</a>.</p>
<p class="reference">Referenced by <a class="el" href="unit__test__validator_8cpp_source.html#l07567">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="macro__fn__do_8cpp_source.html#l00327">CMacroFunction_ModifyPrimerSeq::TheFunction()</a>, and <a class="el" href="pcr-primers-edit_8cpp_source.html#l00068">CPCRPrimerFixI::x_ApplyToBioSource()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a90ec3f9a0a339a1c815649e5d2887e7a">&#9670;&nbsp;</a></span>IsValid()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CPCRPrimerSeq::IsValid </td>
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<p class="definition">Definition at line <a class="el" href="PCRPrimerSeq_8cpp_source.html#l00153">153</a> of file <a class="el" href="PCRPrimerSeq_8cpp_source.html">PCRPrimerSeq.cpp</a>.</p>
<p class="reference">References <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05424">NStr::EndsWith()</a>, <a class="el" href="ncbistr_8cpp_source.html#l02882">NStr::Find()</a>, <a class="el" href="ncbictype_8hpp_source.html#l00061">isalpha()</a>, <a class="el" href="ncbistr_8cpp_source.html#l00106">NStr::IsBlank()</a>, <a class="el" href="pcre2__match_8c_source.html#l00594">match()</a>, <a class="el" href="ctools_2ctransition_2ncbistd_8hpp_source.html#l00225">NULL</a>, <a class="el" href="PCRPrimerSeq_8cpp_source.html#l00101">sm_ValidModifiedPrimerBases</a>, <a class="el" href="corelib_2ncbistr_8hpp_source.html#l05406">NStr::StartsWith()</a>, <a class="el" href="ftds100_2freetds_2odbc_2unittests_2stats_8c_source.html#l00084">str()</a>, <a class="el" href="ncbictype_8hpp_source.html#l00072">tolower()</a>, and <a class="el" href="ncbictype_8hpp_source.html#l00073">toupper()</a>.</p>
<p class="reference">Referenced by <a class="el" href="unit__test__validator_8cpp_source.html#l07483">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="valid__biosource_8cpp_source.html#l01249">CValidError_imp::ValidateSubSource()</a>, and <a class="el" href="valid__biosource_8cpp_source.html#l01204">CValidError_imp::x_CheckPCRPrimer()</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a00f0c680a41e864ad1ec50266783308f">&#9670;&nbsp;</a></span>TrimJunk()</h2>
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<td class="memname"><a class="el" href="static__set_8hpp.html#af6a258d8f3ee5206d682d799316314b1">bool</a> CPCRPrimerSeq::TrimJunk </td>
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<td class="paramtype"><a class="el" href="group__CGIBase.html#ga338951b7e7607b65262fb051e7804d91">string</a> &amp;&#160;</td>
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<p class="definition">Definition at line <a class="el" href="PCRPrimerSeq_8cpp_source.html#l00215">215</a> of file <a class="el" href="PCRPrimerSeq_8cpp_source.html">PCRPrimerSeq.cpp</a>.</p>
<p class="reference">References <a class="el" href="lex_8newick_8cpp_source.html#l01456">i</a>, <a class="el" href="lex_8newick_8cpp_source.html#l01450">len</a>, <a class="el" href="ctools_2ctransition_2ncbistd_8hpp_source.html#l00225">NULL</a>, and <a class="el" href="introspection__html_8hpp_source.html#l00126">orig</a>.</p>
<p class="reference">Referenced by <a class="el" href="unit__test__validator_8cpp_source.html#l07567">BOOST_AUTO_TEST_CASE()</a>, <a class="el" href="macro__fn__do_8cpp_source.html#l00327">CMacroFunction_ModifyPrimerSeq::TheFunction()</a>, and <a class="el" href="pcr-primers-edit_8cpp_source.html#l00042">CPCRPrimerTrimJunk::x_ApplyToBioSource()</a>.</p>
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<hr/>The documentation for this class was generated from the following files:<ul>
<li>include/objects/seqfeat/<a class="el" href="PCRPrimerSeq_8hpp_source.html">PCRPrimerSeq.hpp</a></li>
<li>src/objects/seqfeat/<a class="el" href="PCRPrimerSeq_8cpp_source.html">PCRPrimerSeq.cpp</a></li>
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<address style="align: right;"><small>Modified on Fri Sep 20 14:57:48 2024 by modify_doxy.py rev. 669887</small></address>
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