76 lines
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2.8 KiB
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76 lines
No EOL
2.8 KiB
HTML
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<title>SeqFeatData</title>
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<h3>SeqFeatData</h3><pre>Defined in file <a href="seqfeat.asn.html">seqfeat.asn</a>
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C++ class: <a href="../doxyhtml/classCSeqFeatData.html">CSeqFeatData</a>
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SeqFeatData ::= CHOICE {
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gene <a href="Gene-ref.html">Gene-ref</a> ,
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org <a href="Org-ref.html">Org-ref</a> ,
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cdregion <a href="Cdregion.html">Cdregion</a> ,
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prot <a href="Prot-ref.html">Prot-ref</a> ,
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rna <a href="RNA-ref.html">RNA-ref</a> ,
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pub <a href="Pubdesc.html">Pubdesc</a> , -- publication applies to this seq
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seq <a href="Seq-loc.html">Seq-loc</a> , -- to annotate origin from another seq
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imp <a href="Imp-feat.html">Imp-feat</a> ,
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region VisibleString, -- named region (globin locus)
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comment NULL , -- just a comment
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bond ENUMERATED {
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disulfide (1) ,
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thiolester (2) ,
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xlink (3) ,
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thioether (4) ,
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other (255) } ,
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site ENUMERATED {
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active (1) ,
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binding (2) ,
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cleavage (3) ,
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inhibit (4) ,
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modified (5),
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glycosylation (6) ,
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myristoylation (7) ,
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mutagenized (8) ,
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metal-binding (9) ,
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phosphorylation (10) ,
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acetylation (11) ,
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amidation (12) ,
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methylation (13) ,
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hydroxylation (14) ,
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sulfatation (15) ,
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oxidative-deamination (16) ,
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pyrrolidone-carboxylic-acid (17) ,
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gamma-carboxyglutamic-acid (18) ,
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blocked (19) ,
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lipid-binding (20) ,
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np-binding (21) ,
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dna-binding (22) ,
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signal-peptide (23) ,
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transit-peptide (24) ,
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transmembrane-region (25) ,
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nitrosylation (26) ,
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other (255) } ,
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rsite <a href="Rsite-ref.html">Rsite-ref</a> , -- restriction site (for maps really)
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user <a href="User-object.html">User-object</a> , -- user defined structure
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txinit <a href="Txinit.html">Txinit</a> , -- transcription initiation
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num <a href="Numbering.html">Numbering</a> , -- a numbering system
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psec-str ENUMERATED { -- protein secondary structure
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helix (1) , -- any helix
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sheet (2) , -- beta sheet
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turn (3) } , -- beta or gamma turn
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non-std-residue VisibleString , -- non-standard residue here in seq
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het <a href="Heterogen.html">Heterogen</a> , -- cofactor, prosthetic grp, etc, bound to seq
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biosrc <a href="BioSource.html">BioSource</a>,
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clone <a href="Clone-ref.html">Clone-ref</a>,
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variation <a href="Variation-ref.html">Variation-ref</a>
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}</pre>
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