27 lines
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1.1 KiB
HTML
27 lines
No EOL
1.1 KiB
HTML
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<h3>Packed-seg</h3><pre>Defined in file <a href="seqalign.asn.html">seqalign.asn</a>
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C++ class: <a href="../doxyhtml/classCPacked__seg.html">CPacked_seg</a>
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Packed-seg ::= SEQUENCE { -- for (multiway) global or partial alignments
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dim INTEGER DEFAULT 2 , -- dimensionality
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numseg INTEGER , -- number of segments here
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ids SEQUENCE OF <a href="Seq-id.html">Seq-id</a> , -- sequences in order
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starts SEQUENCE OF INTEGER , -- start OFFSETS in ids order for whole alignment
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present OCTET STRING , -- Boolean if each sequence present or absent in
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-- each segment
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lens SEQUENCE OF INTEGER , -- length of each segment
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strands SEQUENCE OF <a href="Na-strand.html">Na-strand</a> OPTIONAL ,
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scores SEQUENCE OF <a href="Score.html">Score</a> OPTIONAL } -- score for each segment</pre>
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