74 lines
No EOL
3.3 KiB
HTML
74 lines
No EOL
3.3 KiB
HTML
<!DOCTYPE HTML>
|
|
<html>
|
|
<head>
|
|
<title>Gene-commentary</title>
|
|
<script type="text/javascript" src="/core/jquery/jquery-3.6.0.min.js">
|
|
</script>
|
|
<script type="text/javascript">
|
|
jQuery.getScript("/core/alerts/alerts.js", function () { galert(['pre']) });
|
|
</script>
|
|
</head>
|
|
<body>
|
|
<h3>Gene-commentary</h3><pre>Defined in file <a href="entrezgene.asn.html">entrezgene.asn</a>
|
|
C++ class: <a href="../doxyhtml/classCGene__commentary.html">CGene_commentary</a>
|
|
|
|
|
|
Gene-commentary ::= SEQUENCE {
|
|
type INTEGER { -- type of Gene Commentary
|
|
genomic (1) ,
|
|
pre-RNA (2) ,
|
|
mRNA (3) ,
|
|
rRNA (4) ,
|
|
tRNA (5) ,
|
|
snRNA (6) ,
|
|
scRNA (7) ,
|
|
peptide (8) ,
|
|
other-genetic (9) ,
|
|
genomic-mRNA (10) ,
|
|
cRNA (11) ,
|
|
mature-peptide (12) ,
|
|
pre-protein (13) ,
|
|
miscRNA (14) ,
|
|
snoRNA (15) ,
|
|
property (16) , -- used to display tag/value pair
|
|
-- for this type label is used as property tag, text is used as property value,
|
|
-- other fields are not used.
|
|
reference (17), -- currently not used
|
|
generif (18), -- to include generif in the main blob
|
|
phenotype(19), -- to display phenotype information
|
|
complex (20), -- used (but not limited) to identify resulting
|
|
-- interaction complexes
|
|
compound (21), -- pubchem entities
|
|
|
|
ncRNA (22),
|
|
gene-group (23), -- for relationship sets (such as pseudogene / parent gene)
|
|
assembly (24), -- for full assembly accession
|
|
assembly-unit (25), -- for the assembly unit corresponding to the refseq
|
|
c-region (26),
|
|
d-segment (27),
|
|
j-segment (28),
|
|
v-segment (29),
|
|
|
|
comment (254) ,
|
|
other (255) } ,
|
|
heading VisibleString OPTIONAL , -- appears above text
|
|
label VisibleString OPTIONAL , -- occurs to left of text
|
|
-- for protein and RNA types it is a name
|
|
-- for property type it is a property tag
|
|
text VisibleString OPTIONAL , -- block of text
|
|
-- for property type it is a property value
|
|
accession VisibleString OPTIONAL , -- accession for the gi in the seqloc, see note 3
|
|
version INTEGER OPTIONAL , -- version for the accession above
|
|
xtra-properties SEQUENCE OF <a href="Xtra-Terms.html">Xtra-Terms</a> OPTIONAL , -- see note 2
|
|
refs SEQUENCE OF <a href="Pub.html">Pub</a> OPTIONAL , -- refs for this
|
|
source SEQUENCE OF <a href="Other-source.html">Other-source</a> OPTIONAL , -- links and refs
|
|
genomic-coords SEQUENCE OF <a href="Seq-loc.html">Seq-loc</a> OPTIONAL , -- referenced sequences in genomic coords
|
|
seqs SEQUENCE OF <a href="Seq-loc.html">Seq-loc</a> OPTIONAL , -- referenced sequences in non-genomic coords
|
|
products SEQUENCE OF <a href="Gene-commentary.html">Gene-commentary</a> OPTIONAL ,
|
|
properties SEQUENCE OF <a href="Gene-commentary.html">Gene-commentary</a> OPTIONAL ,
|
|
comment SEQUENCE OF <a href="Gene-commentary.html">Gene-commentary</a> OPTIONAL ,
|
|
create-date <a href="Date.html">Date</a> OPTIONAL ,
|
|
update-date <a href="Date.html">Date</a> OPTIONAL ,
|
|
rna <a href="RNA-ref.html">RNA-ref</a> OPTIONAL } </pre>
|
|
</body>
|
|
</html> |