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<title>
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Comments on: NCBI Datasets: Easily Access and Download Sequence Data and Metadata </title>
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<atom:link href="https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/feed/" rel="self" type="application/rss+xml" />
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<link>https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/</link>
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<description>News about NCBI resources and events</description>
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<lastBuildDate>Tue, 20 Aug 2024 19:53:48 +0000</lastBuildDate>
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<item>
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<title>
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By: NCBI Staff </title>
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<link>https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-131470</link>
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<dc:creator><![CDATA[NCBI Staff]]></dc:creator>
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<pubDate>Tue, 20 Aug 2024 19:53:48 +0000</pubDate>
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<guid isPermaLink="false">https://ncbiinsights.ncbi.nlm.nih.gov/?p=12314#comment-131470</guid>
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<description><![CDATA[In reply to <a href="https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-131462">harika</a>.
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Hello! Thanks for your question. Please contact our help desk so we can assist you: https://support.nlm.nih.gov/support/create-case/]]></description>
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<content:encoded><![CDATA[<p>In reply to <a href="https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-131462">harika</a>.</p>
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<p>Hello! Thanks for your question. Please contact our help desk so we can assist you: <a href="https://support.nlm.nih.gov/support/create-case/" rel="nofollow ugc">https://support.nlm.nih.gov/support/create-case/</a></p>
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]]></content:encoded>
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</item>
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<item>
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<title>
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By: harika </title>
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<link>https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-131462</link>
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<dc:creator><![CDATA[harika]]></dc:creator>
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<pubDate>Tue, 20 Aug 2024 11:26:11 +0000</pubDate>
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<guid isPermaLink="false">https://ncbiinsights.ncbi.nlm.nih.gov/?p=12314#comment-131462</guid>
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<description><![CDATA[is it possible to download genomic gff file in tabular format]]></description>
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<content:encoded><![CDATA[<p>is it possible to download genomic gff file in tabular format</p>
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]]></content:encoded>
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</item>
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<item>
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<title>
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By: NCBI Staff </title>
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<link>https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-122939</link>
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<dc:creator><![CDATA[NCBI Staff]]></dc:creator>
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<pubDate>Fri, 28 Jun 2024 13:38:07 +0000</pubDate>
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<guid isPermaLink="false">https://ncbiinsights.ncbi.nlm.nih.gov/?p=12314#comment-122939</guid>
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<description><![CDATA[In reply to <a href="https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-122436">Inflexible User</a>.
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Thank you for your feedback. We will pass it along to the NCBI Datasets Team. Please reach out to our help desk at info@ncbi.nlm.nih.gov, so we can further assist you.]]></description>
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<content:encoded><![CDATA[<p>In reply to <a href="https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-122436">Inflexible User</a>.</p>
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<p>Thank you for your feedback. We will pass it along to the NCBI Datasets Team. Please reach out to our help desk at <a href="mailto:info@ncbi.nlm.nih.gov">info@ncbi.nlm.nih.gov</a>, so we can further assist you.</p>
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]]></content:encoded>
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</item>
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<item>
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<title>
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By: Inflexible User </title>
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<link>https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-122436</link>
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<dc:creator><![CDATA[Inflexible User]]></dc:creator>
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<pubDate>Thu, 27 Jun 2024 23:24:45 +0000</pubDate>
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<guid isPermaLink="false">https://ncbiinsights.ncbi.nlm.nih.gov/?p=12314#comment-122436</guid>
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<description><![CDATA[PLEASE PLEASE PLEASE make it simpler to get a URL to directly command line download one specific file (e.g. assembly .fasta or annotation .gff) that the legacy page provides, rather than the cumbersome URL arguments that generate a .zip file with additional metadata files in multiple subfolders.]]></description>
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<content:encoded><![CDATA[<p>PLEASE PLEASE PLEASE make it simpler to get a URL to directly command line download one specific file (e.g. assembly .fasta or annotation .gff) that the legacy page provides, rather than the cumbersome URL arguments that generate a .zip file with additional metadata files in multiple subfolders.</p>
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]]></content:encoded>
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</item>
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<item>
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<title>
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By: NCBI Staff </title>
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<link>https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-121227</link>
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<dc:creator><![CDATA[NCBI Staff]]></dc:creator>
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<pubDate>Fri, 14 Jun 2024 19:35:06 +0000</pubDate>
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<guid isPermaLink="false">https://ncbiinsights.ncbi.nlm.nih.gov/?p=12314#comment-121227</guid>
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<description><![CDATA[In reply to <a href="https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-121226">Ryan Ward</a>.
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Thanks for the comment. FTP and access to Assembly data through FTP and the E-Utilities API / EDirect will remain exactly the same as before, so this change should not affect bioinformatic workflows only the web pages.]]></description>
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<content:encoded><![CDATA[<p>In reply to <a href="https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-121226">Ryan Ward</a>.</p>
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<p>Thanks for the comment. FTP and access to Assembly data through FTP and the E-Utilities API / EDirect will remain exactly the same as before, so this change should not affect bioinformatic workflows only the web pages.</p>
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]]></content:encoded>
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</item>
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<item>
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<title>
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By: Ryan Ward </title>
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<link>https://ncbiinsights.ncbi.nlm.nih.gov/2023/10/18/ncbi-datasets-access-sequence-data/comment-page-1/#comment-121226</link>
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<dc:creator><![CDATA[Ryan Ward]]></dc:creator>
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<pubDate>Fri, 14 Jun 2024 17:42:30 +0000</pubDate>
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<guid isPermaLink="false">https://ncbiinsights.ncbi.nlm.nih.gov/?p=12314#comment-121226</guid>
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<description><![CDATA[You can continue to provide both the old assembly resources as well as the new format. Completely deprecating the assembly web resources (and especially command line resources) will break a lot of people's workflows.]]></description>
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<content:encoded><![CDATA[<p>You can continue to provide both the old assembly resources as well as the new format. Completely deprecating the assembly web resources (and especially command line resources) will break a lot of people’s workflows.</p>
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]]></content:encoded>
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