nsv930464
- Organism: Homo sapiens
- Study:nstd76 (Watson et al. 2013)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:15
- Publication(s):Watson et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 798 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 74 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 1618 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 806 SVs from 63 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv930464 | Remapped | Pass | GRCh38.p12 | Primary Assembly | Second Pass | NC_000014.9 | Chr14 | - | 106,719,682 | 106,719,695 |
| nsv930464 | Remapped | Pass | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NT_187600.1 | Chr14|NT_1 87600.1 | - | 1,257,853 | 1,257,866 |
| nsv930464 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NT_187600.1 | Chr14|NT_1 87600.1 | 1,211,360 | - | 1,211,374 |
| nsv930464 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000014.8 | Chr14 | 107,174,927 | - | 107,174,941 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1607661 | insertion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nssv1607661 | Remapped | Perfect | NT_187600.1:g.(?_1 257853)_(?_1257866 )ins38000NT_187600 .1:g.(1211360_?)_( ?_1211374)ins38000 | GRCh38.p12 | Second Pass | NT_187600.1 | Chr14|NT_1 87600.1 | 1,211,360 | - | 1,211,374 |
| nssv1607661 | Remapped | Pass | NT_187600.1:g.(?_1 257853)_(?_1257866 )ins38000NT_187600 .1:g.(1211360_?)_( ?_1211374)ins38000 | GRCh38.p12 | Second Pass | NT_187600.1 | Chr14|NT_1 87600.1 | - | 1,257,853 | 1,257,866 |
| nssv1607661 | Remapped | Pass | NC_000014.9:g.(?_1 06719682)_(?_10671 9695)ins38000 | GRCh38.p12 | Second Pass | NC_000014.9 | Chr14 | - | 106,719,682 | 106,719,695 |
| nssv1607661 | Submitted genomic | NC_000014.8:g.(107 174927_?)_(?_10717 4941)ins38000 | GRCh37 (hg19) | NC_000014.8 | Chr14 | 107,174,927 | - | 107,174,941 |