Entry - #616435 - FANCONI ANEMIA, COMPLEMENTATION GROUP T; FANCT - OMIM
# 616435

FANCONI ANEMIA, COMPLEMENTATION GROUP T; FANCT


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
1q32.1 Fanconi anemia, complementation group T 616435 AR 3 UBE2T 610538
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal recessive
GROWTH
Height
- Short stature
SKELETAL
Limbs
- Radial ray anomalies
Hands
- Hypoplastic thumbs
- Duplicated thumbs
HEMATOLOGY
- Anemia
- Thrombocytopenia
- Pancytopenia
- Bone marrow failure
NEOPLASIA
- Increased susceptibility to malignancy
LABORATORY ABNORMALITIES
- Increased chromosomal breakage in response to DNA damaging agents
MISCELLANEOUS
- Onset at birth or early infancy
- Two unrelated Japanese patients have been reported (last curated June 2015)
MOLECULAR BASIS
- Caused by mutation in the ubiquitin-conjugating enzyme E2T gene (UBE2T, 610538.0001)
Fanconi anemia - PS227650 - 21 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.22 ?Fanconi anemia, complementation group V AR 3 617243 MAD2L2 604094
1q32.1 Fanconi anemia, complementation group T AR 3 616435 UBE2T 610538
2p16.1 Fanconi anemia, complementation group L AR 3 614083 PHF9 608111
3p25.3 Fanconi anemia, complementation group D2 AR 3 227646 FANCD2 613984
6p21.31 Fanconi anemia, complementation group E AR 3 600901 FANCE 613976
7q36.1 ?Fanconi anemia, complementation group U AR 3 617247 XRCC2 600375
9p13.3 Fanconi anemia, complementation group G AR 3 614082 XRCC9 602956
9q22.32 Fanconi anemia, complementation group C AR 3 227645 FANCC 613899
11p14.3 Fanconi anemia, complementation group F AR 3 603467 FANCF 613897
13q13.1 Fanconi anemia, complementation group D1 AR 3 605724 BRCA2 600185
15q15.1 Fanconi anemia, complementation group R AD 3 617244 RAD51 179617
15q26.1 Fanconi anemia, complementation group I AR 3 609053 FANCI 611360
16p13.3 Fanconi anemia, complementation group P AR 3 613951 SLX4 613278
16p13.12 Fanconi anemia, complementation group Q AR 3 615272 ERCC4 133520
16p12.2 Fanconi anemia, complementation group N AR 3 610832 PALB2 610355
16q23.1 ?Fanconi anemia, complementation group W AR 3 617784 RFWD3 614151
16q24.3 Fanconi anemia, complementation group A AR 3 227650 FANCA 607139
17q21.31 Fanconi anemia, complementation group S AR 3 617883 BRCA1 113705
17q22 Fanconi anemia, complementation group O AR 3 613390 RAD51C 602774
17q23.2 Fanconi anemia, complementation group J 3 609054 BRIP1 605882
Xp22.2 Fanconi anemia, complementation group B XLR 3 300514 FANCB 300515

TEXT

A number sign (#) is used with this entry because of evidence that Fanconi anemia of complementation group T (FANCT) is caused by compound heterozygous mutation in the UBE2T gene (610538) on chromosome 1q32.


Description

Fanconi anemia is characterized by genomic instability, increased susceptibility to cancer development, and bone marrow failure associated with various developmental abnormalities, such as radial ray anomalies or short stature (summary by Hira et al., 2015).

For a discussion of genetic heterogeneity of Fanconi anemia, see FANCA (227650).


Clinical Features

Hira et al. (2015) reported 2 unrelated Japanese patients, a girl (PNGS-252) and a boy (PNGS-255), with Fanconi anemia. Both patients presented at birth with thumb abnormalities: the girl had a hypoplastic thumb and the boy had bilateral thumb polydactyly. The girl also had short stature and abnormalities of external genitalia, whereas the boy had facial palsy and dysplasia of the middle ear bone. Both were found to have thrombocytopenia and anemia as well as increased rate of chromosomal breakage. The girl developed pancytopenia, and the boy was diagnosed with refractory anemia evolving to acute myeloid leukemia associated with a somatic 3q abnormality. Both received bone marrow transplantation, which was successful in the girl; however, the boy died at age 8 years.


Inheritance

The transmission pattern of FANCT in the families reported by Hira et al. (2015) was consistent with autosomal recessive inheritance.


Molecular Genetics

In 2 unrelated Japanese patients with FANCT, Hira et al. (2015) identified mutations in the UBE2T gene. Both patients carried a missense mutation (Q2E; 610538.0001 on 1 allele; patient PNGS-255 carried a splice site mutation 610538.0002) on the other allele, and patient PNGS-252 carried a 23-kb deletion encompassing almost the entire UBE2T gene and part of the LGR6 gene (606653) on the other allele. The exact breakpoints of the deletion could not be determined. The mutations were found by whole-exome sequencing and confirmed by Sanger sequencing. Cells derived from patient PNGS-252 showed increased levels of mitomycin C-induced chromosome breakage, which was rescued by expression of wildtype UBE2T. In vitro functional expression assays and studies on cells derived from patient PNGS-252 showed that the Q2E mutation abolished FANCD2 (613984) monoubiquitination and interaction with FANCL (608111).


REFERENCES

  1. Hira, A., Yoshida, K., Sato, K., Okuno, Y., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Shimamoto, A., Tahara, H., Ito, E., Kojima, S., Kurumizaka, H., Ogawa, S., Takata, M., Yabe, H., Yabe, M. Mutations in the gene encoding the E2 conjugating enzyme UBE2T cause Fanconi anemia. Am. J. Hum. Genet. 96: 1001-1007, 2015. [PubMed: 26046368, images, related citations] [Full Text]


Creation Date:
Cassandra L. Kniffin : 6/24/2015
carol : 01/14/2016
carol : 1/13/2016
carol : 6/25/2015
mcolton : 6/25/2015
ckniffin : 6/24/2015

# 616435

FANCONI ANEMIA, COMPLEMENTATION GROUP T; FANCT


ORPHA: 84;   DO: 0111081;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
1q32.1 Fanconi anemia, complementation group T 616435 Autosomal recessive 3 UBE2T 610538

TEXT

A number sign (#) is used with this entry because of evidence that Fanconi anemia of complementation group T (FANCT) is caused by compound heterozygous mutation in the UBE2T gene (610538) on chromosome 1q32.


Description

Fanconi anemia is characterized by genomic instability, increased susceptibility to cancer development, and bone marrow failure associated with various developmental abnormalities, such as radial ray anomalies or short stature (summary by Hira et al., 2015).

For a discussion of genetic heterogeneity of Fanconi anemia, see FANCA (227650).


Clinical Features

Hira et al. (2015) reported 2 unrelated Japanese patients, a girl (PNGS-252) and a boy (PNGS-255), with Fanconi anemia. Both patients presented at birth with thumb abnormalities: the girl had a hypoplastic thumb and the boy had bilateral thumb polydactyly. The girl also had short stature and abnormalities of external genitalia, whereas the boy had facial palsy and dysplasia of the middle ear bone. Both were found to have thrombocytopenia and anemia as well as increased rate of chromosomal breakage. The girl developed pancytopenia, and the boy was diagnosed with refractory anemia evolving to acute myeloid leukemia associated with a somatic 3q abnormality. Both received bone marrow transplantation, which was successful in the girl; however, the boy died at age 8 years.


Inheritance

The transmission pattern of FANCT in the families reported by Hira et al. (2015) was consistent with autosomal recessive inheritance.


Molecular Genetics

In 2 unrelated Japanese patients with FANCT, Hira et al. (2015) identified mutations in the UBE2T gene. Both patients carried a missense mutation (Q2E; 610538.0001 on 1 allele; patient PNGS-255 carried a splice site mutation 610538.0002) on the other allele, and patient PNGS-252 carried a 23-kb deletion encompassing almost the entire UBE2T gene and part of the LGR6 gene (606653) on the other allele. The exact breakpoints of the deletion could not be determined. The mutations were found by whole-exome sequencing and confirmed by Sanger sequencing. Cells derived from patient PNGS-252 showed increased levels of mitomycin C-induced chromosome breakage, which was rescued by expression of wildtype UBE2T. In vitro functional expression assays and studies on cells derived from patient PNGS-252 showed that the Q2E mutation abolished FANCD2 (613984) monoubiquitination and interaction with FANCL (608111).


REFERENCES

  1. Hira, A., Yoshida, K., Sato, K., Okuno, Y., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Shimamoto, A., Tahara, H., Ito, E., Kojima, S., Kurumizaka, H., Ogawa, S., Takata, M., Yabe, H., Yabe, M. Mutations in the gene encoding the E2 conjugating enzyme UBE2T cause Fanconi anemia. Am. J. Hum. Genet. 96: 1001-1007, 2015. [PubMed: 26046368] [Full Text: https://doi.org/10.1016/j.ajhg.2015.04.022]


Creation Date:
Cassandra L. Kniffin : 6/24/2015

Edit History:
carol : 01/14/2016
carol : 1/13/2016
carol : 6/25/2015
mcolton : 6/25/2015
ckniffin : 6/24/2015