Entry - #300558 - INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED 30; XLID30 - OMIM
# 300558

INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED 30; XLID30


Alternative titles; symbols

MENTAL RETARDATION, X-LINKED 30; MRX30
MENTAL RETARDATION, X-LINKED 47; MRX47


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
Xq23 Intellectual developmental disorder, X-linked 30 300558 XLR 3 PAK3 300142
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- X-linked recessive
HEAD & NECK
Head
- Microcephaly
Face
- Flat face
- Low forehead
Ears
- Relatively long ears
Nose
- High-bridged nose
- Short nose
- Upturned nasal tips
Mouth
- Open mouth appearance
- Thin upper lip
- High palate
- Drooling
NEUROLOGIC
Central Nervous System
- Mental retardation, mild to severe
- Mental retardation, borderline-mild in carrier females
- Delayed speech development
- Inarticulate speech Delayed gross motor skills
- Posterior slow-wave activity on EEG
- Epilepsy
Behavioral Psychiatric Manifestations
- Schizophrenia-like symptoms (uncommon)
- Short attention span
- Anxiety
- Restlessness
- Agitation
- Hyperactivity
- Aggression
- Psychosis
- Impaired visuospatial perception
- Impaired attentional and executive function
MISCELLANEOUS
- Variable severity
- Some patients can attend special school
- Some patients can hold menial jobs
MOLECULAR BASIS
- Caused by mutation in the p21-activated kinase 3 gene (PAK3, 300142.0001)
Intellectual developmental disorder, nonsyndromic, X-linked - PS309530 - 55 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
Xp22.3 Intellectual developmental disorder, X-linked 2 XL 2 300428 XLID2 300428
Xp22.2 Intellectual developmental disorder, X-linked 73 XLR 2 300355 XLID73 300355
Xp22.2 Intellectual developmental disorder, X-linked 104 XL 3 300983 FRMPD4 300838
Xp22.12 Intellectual developmental disorder, X-linked 19 XLD 3 300844 RPS6KA3 300075
Xp22.11 Intellectual developmental disorder, X-linked 103 XLR 3 300982 KLHL15 300980
Xp21.3 Intellectual developmental disorder, X-linked 29 XLR 3 300419 ARX 300382
Xp21.3-p21.2 Intellectual developmental disorder, X-linked 21 XLR 3 300143 IL1RAPL1 300206
Xp11-q21 Intellectual developmental disorder, X-linked 20 XL 2 300047 XLID20 300047
Xp11.4 Intellectual developmental disorder, X-linked 58 XLR 3 300210 TSPAN7 300096
Xp11.4 Intellectual developmental disorder, X-linked 99, syndromic, female-restricted XLD 3 300968 USP9X 300072
Xp11.4 Intellectual developmental disorder, X-linked 99 XLR 3 300919 USP9X 300072
Xp11.3-q13.3 Intellectual developmental disorder, X-linked 14 XL 2 300062 XLID14 300062
Xp11.3-p11.21 Intellectual developmental disorder, X-linked 45 XL 2 300498 XLID45 300498
Xp11.3-q22.3 Intellectual developmental disorder, X-linked 84 XLR 2 300505 XLID84 300505
Xp11.3 Intellectual developmental disorder, X-linked 89 XLD 2 300848 XLID89 300848
Xp11.3 Intellectual developmental disorder, X-linked 92 XLR 2 300851 XLID92 300851
Xp11.3 Intellectual developmental disorder, X-linked 108 XLR 3 301024 SLC9A7 300368
Xp11.3-p11.23 Intellectual developmental disorder, X-linked 50 XL 3 300115 SYN1 313440
Xp11.2-q12 Intellectual developmental disorder, X-linked 81 XLR 2 300433 XLID81 300433
Xp11.23 Intellectual developmental disorder, X-linked 9 XLR 3 309549 FTSJ1 300499
Xp11.23 Intellectual developmental disorder, X-linked 96 XLR 3 300802 SYP 313475
Xp11.23 Intellectual developmental disorder, X-linked 105 XLR 3 300984 USP27X 300975
Xp11.22 Xp11.22 microduplication syndrome 4 300705 DUPXp11.22 300705
Xp11.22 Intellectual developmental disorder, X-linked 1 XLD 3 309530 IQSEC2 300522
Xq12-q21.3 Intellectual developmental disorder, X-linked 77 XLR 2 300454 XLID77 300454
Xq13.1 Intellectual developmental disorder, X-linked 100 XLR 3 300923 KIF4A 300521
Xq13.1 Intellectual developmental disorder, X-linked 90 XLR 3 300850 DLG3 300189
Xq13.1 Intellectual developmental disorder, X-linked 112 XLR 3 301111 ZMYM3 300061
Xq13.1 Intellectual developmental disorder, X-linked 106 XLR 3 300997 OGT 300255
Xq13.2 Tonne-Kalscheuer syndrome XL 3 300978 RLIM 300379
Xq13.3 Intellectual developmental disorder, X-linked 91 XLD 4 300577 XLID91 300577
Xq13.3 Intellectual developmental disorder, X-linked 98 XLD 3 300912 NEXMIF 300524
Xq21.1 Intellectual developmental disorder, X-linked 93 XLR 3 300659 BRWD3 300553
Xq21.1 Intellectual developmental disorder, X-linked 97 XL 3 300803 ZNF711 314990
Xq22.1 ?Intellectual developmental disorder, X-linked 113 XLR 3 301116 CSTF2 300907
Xq22.2-q26 Intellectual developmental disorder, X-linked 53 XLR 2 300324 XLID53 300324
Xq22.3 ?Intellectual developmental disorder, X-linked 101 XLR 3 300928 MID2 300204
Xq23-q24 Intellectual developmental disorder, X-linked 23 XL 2 300046 XLID23 300046
Xq23 Intellectual developmental disorder, X-linked 63 XLD 3 300387 ACSL4 300157
Xq23 Intellectual developmental disorder, X-linked 30 XLR 3 300558 PAK3 300142
Xq24-q25 Intellectual developmental disorder, X-linked 82 XLR 2 300518 XLID82 300518
Xq24 Intellectual developmental disorder, X-linked 88 XL 2 300852 XLID88 300852
Xq24 ?Intellectual developmental disorder, X-linked 107 XL 3 301013 STEEP1 301012
Xq25-q26 Intellectual developmental disorder, X-linked 46 XLR 2 300436 XLID46 300436
Xq25 Intellectual developmental disorder, X-linked syndromic, Wu type XLR 3 300699 GRIA3 305915
Xq25 Intellectual developmental disorder, X-linked syndromic, Kumar type XL 3 300957 THOC2 300395
Xq26 Intellectual developmental disorder, X-linked 42 2 300372 XLID42 300372
Xq26.3-q27.1 Intellectual developmental disorder, X-linked 110 XLR 3 301095 FGF13 300070
Xq27.3 Intellectual developmental disorder, X-linked 111 XL 3 301107 SLITRK2 300561
Xq28 Intellectual developmental disorder, X-linked 109 XLR 3 309548 AFF2 300806
Xq28 Intellectual developmental disorder, X-linked 114 XL 3 301134 SRPK3 301002
Xq28 Methylmalonic aciduria and homocysteinemia, cblX type XLR 3 309541 HCFC1 300019
Xq28 Intellectual developmental disorder, X-linked 41 XLD 3 300849 GDI1 300104
Xq28 Intellectual developmental disorder, X-linked 72 XLR 3 300271 RAB39B 300774
Chr.X Intellectual developmental disorder, X-linked 95 XLD 2 300716 XLID95 300716

TEXT

A number sign (#) is used with this entry because of evidence that nonsyndromic X-linked intellectual developmental disorder-30 (XLID30) is caused by mutation in the gene encoding p21-activated kinase-3 (PAK3; 300142) on chromosome Xq23.


Clinical Features

Des Portes et al. (1997) reported a French family in which 6 males in 2 generations had nonsyndromic X-linked mental retardation. All affected males had moderate to severe mental retardation without seizures, statural growth deficiencies, or other physical abnormalities.

Gedeon et al. (2003) reported an Australian family with nonsyndromic MRX affecting 19 males in 5 generations. Some of the patients had relatively long ears, but no other physical abnormalities. The mental deficit was borderline to mild, and most attended special schools, had menial jobs, and could perform activities of daily living independently. Four patients had histories of psychiatric problems, including features of schizophrenia. Carrier females had no abnormalities.

Peippo et al. (2007) further characterized PAK3-related mental retardation in a Finnish family. The 5 affected males examined had a proportionately small head or microcephaly, large ears, thin upper lip, open mouth appearance, drooling, and inarticulate speech. Behavioral features included short attention span, anxiety, restlessness, and aggression. One affected male had paranoid psychosis. EEG recordings in 4 affected males and 1 carrier female demonstrated similar posterior slow wave activity without epileptic discharge. One affected male had epilepsy. Neuropsychologic testing in affected males and carrier females suggested a common profile of impaired spatial cognitive abilities and defects in attentional and executive functions. In contrast to the report by Gedeon et al. (2003), most carrier females manifested learning problems and mild mental disability. Skewed X-inactivation was observed in female carriers.

Rejeb et al. (2008) reported a Tunisian family with PAK3-related mental retardation. The phenotype was relatively homogeneous and characterized by microcephaly, marked hypotonia, and oromotor dysfunction with drooling and speech difficulties. Affected individuals also had characteristic behavioral features, including aggression, hyperactivity, and agitation. Dysmorphic features consisted of microcephaly, flat face, low forehead, upslanting palpebral fissures, short nose with upturned nasal tips, large ears, large open mouth, and high palate. The findings suggested a specific phenotype.


Mapping

By linkage analysis of an Australian family with mental retardation, Donnelly et al. (1996) identified a candidate locus, termed MRX30, within a 28-cM region on chromosome Xq21.3-q24 between markers DXS990 and DXS424 (maximum multipoint lod score of 2.78).

By linkage analysis of a French family with nonsyndromic X-linked mental retardation, des Portes et al. (1997) identified a candidate disease locus, termed MRX47, on chromosome Xq22.3-q24 (maximum 2-point lod score of 3.75 at marker DXS1059). Recombination events defined a 17-cM interval between DXS1105 and DXS8067. The region overlapped with that reported by Donnelly et al. (1996) for MRX30.


Molecular Genetics

Allen et al. (1998) identified a mutation in the PAK3 gene (300142.0001) in affected males of the Australian family with MRX30 reported by Donnelly et al. (1996).

In affected members of the French family with MRX47 reported by des Portes et al. (1997), Bienvenu et al. (2000) identified a mutation in the PAK3 gene (300142.0002).

Gedeon et al. (2003) identified a mutation in the PAK3 gene (300142.0003) that segregated with mental retardation in an Australian family.

In 5 males with mental retardation in a Finnish family, Peippo et al. (2007) identified a novel missense mutation in the PAK3 gene (300142.0004). The mutation was absent in 2 unaffected male relatives. Each mother of an affected male was found to be a carrier of the mutation.

Rejeb et al. (2008) identified a mutation in the PAK3 gene (300142.0005) in affected members of a Tunisian family with mental retardation.


REFERENCES

  1. Allen, K. M., Gleeson, J. G., Bagrodia, S., Partington, M. W., MacMillan, J. C., Cerione, R. A., Mulley, J. C., Walsh, C. A. PAK3 mutation in nonsyndromic X-linked mental retardation. Nature Genet. 20: 25-30, 1998. [PubMed: 9731525, related citations] [Full Text]

  2. Bienvenu, T., des Portes, V., McDonell, N., Carrie, A., Zemni, R., Couvert, P., Ropers, H. H., Moraine, C., van Bokhoven, H., Fryns, J. P., Allen, K., Walsh, C. A., Boue, J., Kahn, A., Chelly, J., Beldjord, C. Missense mutation in PAK3, R67C, causes X-linked nonspecific mental retardation. Am. J. Med. Genet. 93: 294-298, 2000. [PubMed: 10946356, related citations] [Full Text]

  3. des Portes, V., Soufir, N., Carrie, A., Billuart, P., Bienvenu, T., Vinet, M. C., Beldjord, C., Ponsot, G., Kahn, A., Boue, J., Chelly, J. Gene for nonspecific X-linked mental retardation (MRX 47) is located in Xq22.3-q24. Am. J. Med. Genet. 72: 324-328, 1997. [PubMed: 9332663, related citations] [Full Text]

  4. Donnelly, A. J., Partington, M. W., Ryan, A. K., Mulley, J. C. Regional localisation of two non-specific X-linked mental retardation genes (MRX30 and MRX31). Am. J. Med. Genet. 64: 113-120, 1996. [PubMed: 8826460, related citations] [Full Text]

  5. Gedeon, A. K., Nelson, J., Gecz, J., Mulley, J. C. X-linked mild non-syndromic mental retardation with neuropsychiatric problems and the missense mutation A365E in PAK3. Am. J. Med. Genet. 120A: 509-517, 2003. [PubMed: 12884430, related citations] [Full Text]

  6. Peippo, M., Koivisto, A. M., Sarkamo, T., Sipponen, M., von Koskull, H., Ylisaukko-oja, T., Rehnstrom, K., Froyen, G., Ignatius, J., Jarvela, I. PAK3 related mental disability: further characterization of the phenotype. Am. J. Med. Genet. 143A: 2406-2416, 2007. [PubMed: 17853471, related citations] [Full Text]

  7. Rejeb, I., Saillour, Y., Castelnau, L., Julien, C., Bienvenu, T., Taga, P., Chaabouni, H., Chelly, J., Jemaa, L. B., Bahi-Buisson, N. A novel splice mutation in PAK3 gene underlying mental retardation with neuropsychiatric features. Europ. J. Hum. Genet. 16: 1358-1363, 2008. [PubMed: 18523455, related citations] [Full Text]


Cassandra L. Kniffin - updated : 8/31/2009
Kelly A. Przylepa - updated : 4/1/2008
Creation Date:
Cassandra L. Kniffin : 10/6/2005
carol : 12/01/2022
carol : 08/20/2021
wwang : 09/16/2009
ckniffin : 8/31/2009
carol : 4/4/2008
terry : 4/1/2008
carol : 10/7/2005
ckniffin : 10/7/2005

# 300558

INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED 30; XLID30


Alternative titles; symbols

MENTAL RETARDATION, X-LINKED 30; MRX30
MENTAL RETARDATION, X-LINKED 47; MRX47


ORPHA: 777;   DO: 0112051;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
Xq23 Intellectual developmental disorder, X-linked 30 300558 X-linked recessive 3 PAK3 300142

TEXT

A number sign (#) is used with this entry because of evidence that nonsyndromic X-linked intellectual developmental disorder-30 (XLID30) is caused by mutation in the gene encoding p21-activated kinase-3 (PAK3; 300142) on chromosome Xq23.


Clinical Features

Des Portes et al. (1997) reported a French family in which 6 males in 2 generations had nonsyndromic X-linked mental retardation. All affected males had moderate to severe mental retardation without seizures, statural growth deficiencies, or other physical abnormalities.

Gedeon et al. (2003) reported an Australian family with nonsyndromic MRX affecting 19 males in 5 generations. Some of the patients had relatively long ears, but no other physical abnormalities. The mental deficit was borderline to mild, and most attended special schools, had menial jobs, and could perform activities of daily living independently. Four patients had histories of psychiatric problems, including features of schizophrenia. Carrier females had no abnormalities.

Peippo et al. (2007) further characterized PAK3-related mental retardation in a Finnish family. The 5 affected males examined had a proportionately small head or microcephaly, large ears, thin upper lip, open mouth appearance, drooling, and inarticulate speech. Behavioral features included short attention span, anxiety, restlessness, and aggression. One affected male had paranoid psychosis. EEG recordings in 4 affected males and 1 carrier female demonstrated similar posterior slow wave activity without epileptic discharge. One affected male had epilepsy. Neuropsychologic testing in affected males and carrier females suggested a common profile of impaired spatial cognitive abilities and defects in attentional and executive functions. In contrast to the report by Gedeon et al. (2003), most carrier females manifested learning problems and mild mental disability. Skewed X-inactivation was observed in female carriers.

Rejeb et al. (2008) reported a Tunisian family with PAK3-related mental retardation. The phenotype was relatively homogeneous and characterized by microcephaly, marked hypotonia, and oromotor dysfunction with drooling and speech difficulties. Affected individuals also had characteristic behavioral features, including aggression, hyperactivity, and agitation. Dysmorphic features consisted of microcephaly, flat face, low forehead, upslanting palpebral fissures, short nose with upturned nasal tips, large ears, large open mouth, and high palate. The findings suggested a specific phenotype.


Mapping

By linkage analysis of an Australian family with mental retardation, Donnelly et al. (1996) identified a candidate locus, termed MRX30, within a 28-cM region on chromosome Xq21.3-q24 between markers DXS990 and DXS424 (maximum multipoint lod score of 2.78).

By linkage analysis of a French family with nonsyndromic X-linked mental retardation, des Portes et al. (1997) identified a candidate disease locus, termed MRX47, on chromosome Xq22.3-q24 (maximum 2-point lod score of 3.75 at marker DXS1059). Recombination events defined a 17-cM interval between DXS1105 and DXS8067. The region overlapped with that reported by Donnelly et al. (1996) for MRX30.


Molecular Genetics

Allen et al. (1998) identified a mutation in the PAK3 gene (300142.0001) in affected males of the Australian family with MRX30 reported by Donnelly et al. (1996).

In affected members of the French family with MRX47 reported by des Portes et al. (1997), Bienvenu et al. (2000) identified a mutation in the PAK3 gene (300142.0002).

Gedeon et al. (2003) identified a mutation in the PAK3 gene (300142.0003) that segregated with mental retardation in an Australian family.

In 5 males with mental retardation in a Finnish family, Peippo et al. (2007) identified a novel missense mutation in the PAK3 gene (300142.0004). The mutation was absent in 2 unaffected male relatives. Each mother of an affected male was found to be a carrier of the mutation.

Rejeb et al. (2008) identified a mutation in the PAK3 gene (300142.0005) in affected members of a Tunisian family with mental retardation.


REFERENCES

  1. Allen, K. M., Gleeson, J. G., Bagrodia, S., Partington, M. W., MacMillan, J. C., Cerione, R. A., Mulley, J. C., Walsh, C. A. PAK3 mutation in nonsyndromic X-linked mental retardation. Nature Genet. 20: 25-30, 1998. [PubMed: 9731525] [Full Text: https://doi.org/10.1038/1675]

  2. Bienvenu, T., des Portes, V., McDonell, N., Carrie, A., Zemni, R., Couvert, P., Ropers, H. H., Moraine, C., van Bokhoven, H., Fryns, J. P., Allen, K., Walsh, C. A., Boue, J., Kahn, A., Chelly, J., Beldjord, C. Missense mutation in PAK3, R67C, causes X-linked nonspecific mental retardation. Am. J. Med. Genet. 93: 294-298, 2000. [PubMed: 10946356] [Full Text: https://doi.org/10.1002/1096-8628(20000814)93:4<294::aid-ajmg8>3.0.co;2-f]

  3. des Portes, V., Soufir, N., Carrie, A., Billuart, P., Bienvenu, T., Vinet, M. C., Beldjord, C., Ponsot, G., Kahn, A., Boue, J., Chelly, J. Gene for nonspecific X-linked mental retardation (MRX 47) is located in Xq22.3-q24. Am. J. Med. Genet. 72: 324-328, 1997. [PubMed: 9332663] [Full Text: https://doi.org/10.1002/(sici)1096-8628(19971031)72:3<324::aid-ajmg14>3.0.co;2-v]

  4. Donnelly, A. J., Partington, M. W., Ryan, A. K., Mulley, J. C. Regional localisation of two non-specific X-linked mental retardation genes (MRX30 and MRX31). Am. J. Med. Genet. 64: 113-120, 1996. [PubMed: 8826460] [Full Text: https://doi.org/10.1002/(SICI)1096-8628(19960712)64:1<113::AID-AJMG19>3.0.CO;2-Q]

  5. Gedeon, A. K., Nelson, J., Gecz, J., Mulley, J. C. X-linked mild non-syndromic mental retardation with neuropsychiatric problems and the missense mutation A365E in PAK3. Am. J. Med. Genet. 120A: 509-517, 2003. [PubMed: 12884430] [Full Text: https://doi.org/10.1002/ajmg.a.20131]

  6. Peippo, M., Koivisto, A. M., Sarkamo, T., Sipponen, M., von Koskull, H., Ylisaukko-oja, T., Rehnstrom, K., Froyen, G., Ignatius, J., Jarvela, I. PAK3 related mental disability: further characterization of the phenotype. Am. J. Med. Genet. 143A: 2406-2416, 2007. [PubMed: 17853471] [Full Text: https://doi.org/10.1002/ajmg.a.31956]

  7. Rejeb, I., Saillour, Y., Castelnau, L., Julien, C., Bienvenu, T., Taga, P., Chaabouni, H., Chelly, J., Jemaa, L. B., Bahi-Buisson, N. A novel splice mutation in PAK3 gene underlying mental retardation with neuropsychiatric features. Europ. J. Hum. Genet. 16: 1358-1363, 2008. [PubMed: 18523455] [Full Text: https://doi.org/10.1038/ejhg.2008.103]


Contributors:
Cassandra L. Kniffin - updated : 8/31/2009
Kelly A. Przylepa - updated : 4/1/2008

Creation Date:
Cassandra L. Kniffin : 10/6/2005

Edit History:
carol : 12/01/2022
carol : 08/20/2021
wwang : 09/16/2009
ckniffin : 8/31/2009
carol : 4/4/2008
terry : 4/1/2008
carol : 10/7/2005
ckniffin : 10/7/2005