Entry - #300476 - CONE-ROD DYSTROPHY, X-LINKED, 3; CORDX3 - OMIM
# 300476

CONE-ROD DYSTROPHY, X-LINKED, 3; CORDX3


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
Xp11.23 Cone-rod dystrophy, X-linked, 3 300476 XLR 3 CACNA1F 300110
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- X-linked recessive
HEAD & NECK
Eyes
- Decreased visual acuity
- Myopia
- Nystagmus (in some patients)
- Astigmatism (in some patients)
- Photophobia (rare)
- Irregular pigmentation in macular area
- Optic disc pallor (rare)
- Loss of foveal reflex (rare)
- Retinal detachment (rare)
- Concentric constriction of visual fields (in some patients)
- Central scotoma (rare)
- Red-green color vision defect
- Dark adaptation defective in both cones and rods
- Reduced cone responses on electroretinography (ERG)
- Reduced rod responses on ERG (in some patients)
- Thinning of choroid on ocular coherence tomography (in some patients)
MISCELLANEOUS
- Onset of symptoms in early childhood in most patients
- Disease shows slow progression
MOLECULAR BASIS
- Caused by mutation in the calcium channel, voltage-dependent, alpha-1F subunit gene (CACNA1F, 300110.0007)
Cone-rod dystrophy/Cone dystrophy - PS120970 - 33 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p22.1 Cone-rod dystrophy 3 AR 3 604116 ABCA4 601691
1p13.3 Cone-rod dystrophy 21 AR 3 616502 DRAM2 613360
1q12-q24 Cone-rod dystrophy 8 AR 2 605549 CORD8 605549
1q22 Cone-rod dystrophy 10 AR 3 610283 SEMA4A 607292
2p23.2 Retinitis pigmentosa 54 AR 3 613428 PCARE 613425
4p15.33 Cone-rod dystrophy 18 AR 3 615374 RAB28 612994
4p15.32 Cone-rod dystrophy 12 AD, AR 3 612657 PROM1 604365
6p21.1 Cone dystrophy-3 AD 3 602093 GUCA1A 600364
6p21.1 Cone-rod dystrophy 14 AD 3 602093 GUCA1A 600364
6q14 Cone-rod dystrophy 7 AD 2 603649 CORD7 603649
8p11.22 Cone-rod dystrophy 9 AR 3 612775 ADAM9 602713
8q22.1 Retinitis pigmentosa 64 AR 3 614500 CFAP418 614477
8q22.1 Cone-rod dystrophy 16 AR 3 614500 CFAP418 614477
10q23.1 Macular dystrophy, retinal AR 3 613660 CDHR1 609502
10q23.1 Retinitis pigmentosa 65 AR 3 613660 CDHR1 609502
10q23.1 Cone-rod dystrophy 15 AR 3 613660 CDHR1 609502
10q23.33 Cone dystrophy 4 AR 3 613093 PDE6C 600827
10q26 Cone-rod dystrophy 17 AD 2 615163 CORD17 615163
12q21.33 Cone-rod dystrophy 20 AR 3 615973 POC1B 614784
14q11.2 Cone-rod dystrophy 13 AR 3 608194 RPGRIP1 605446
14q24.3 Cone-rod dystrophy 19 AR 3 615860 TTLL5 612268
16p11.2 Cone-rod dystrophy 22 AR 3 619531 TLCD3B 615175
17p13.2-p13.1 Cone-rod dystrophy 5 AD 3 600977 PITPNM3 608921
17p13.1 Cone-rod dystrophy 6 AD, AR 3 601777 GUCY2D 600179
17q11.2 Cone-rod dystrophy 24 AD 3 620342 UNC119 604011
18q21.1-q21.3 Cone-rod retinal dystrophy-1 AD 2 600624 CORD1 600624
19p13.3 Cone-rod dystrophy 11 AD 3 610381 RAX2 610362
19q13.33 Cone-rod retinal dystrophy-2 AD 3 120970 CRX 602225
Xp11.4 Cone-rod dystrophy, X-linked, 1 XLR 3 304020 RPGR 312610
Xp11.23 Cone-rod dystrophy, X-linked, 3 XLR 3 300476 CACNA1F 300110
Xq27 Cone dystrophy, progressive X-linked, 2 XL 2 300085 COD2 300085
Xq28 Blue cone monochromacy XLR 3 303700 OPN1LW 300822
Xq28 Blue cone monochromacy XLR 3 303700 OPN1MW 300821

TEXT

A number sign (#) is used with this entry because of evidence that X-linked cone-rod dystrophy-3 (CORDX3) is caused by mutation in the CACNA1F gene (300110) on chromosome Xp11.


Description

Cone-rod dystrophy is a retinal disorder with predominantly cone involvement. Rod impairment may occur at the same time as the cone impairment or appear later. Patients with CORD usually have reduced visual acuity, photophobia, and color vision defects (summary by Huang et al., 2013).

For a discussion of genetic heterogeneity of X-linked cone-rod dystrophy, see 304020.


Clinical Features

Mantyjarvi et al. (2001) described a large 6-generation Finnish family in which 10 male members, ranging in age from 6 to 81 years, had progressive cone-rod dystrophy. Onset of symptoms was in early childhood for most patients, although some were not diagnosed until the fourth or fifth decade of life. Visual acuities ranged from 20/40 to counting fingers, and all were myopic. Concentrically constricted visual fields were observed in 5 patients, 1 of whom also had central scotomas; of the remaining 5, 3 showed general reduction of sensitivity in the central fields. Of 7 patients in whom color vision was assessed, 6 had red/green or red defects and 1 showed normal color vision. Of 5 patients in whom dark adaptation was examined, all had an elevated rod threshold and 3 also had an elevated cone threshold. Of 5 patients in whom ERG was performed, all exhibited defective cone responses, with 1 also showing reduction of the rod response. Funduscopic examination showed myopic changes and irregular pigmentation in the macular area. Two patients underwent surgery for unilateral retinal detachment. Follow-up over 12 to 14 years of 4 affected family members showed no changes in fundus appearance, visual fields, or dark adaptation; however, visual acuity had decreased in 1 patient, reduced sensitivity of the visual fields was noted in 2, and error scores in the Farnsworth-Munsell 100-hue (FM100) test had increased in 3, suggesting retinal progression of the disease. Examination of 6 obligate carriers showed normal fundi, visual fields, and color vision.

Hauke et al. (2013) examined 4 of 10 affected male members over 3 generations of a large German family with a progressive retinal disorder. Features typical of X-linked cone-rod dystrophy in these patients included slowly progressive loss of visual acuity, moderate to high myopia, color vision defects, elevated cone and rod thresholds in dark adaptation, reduced cone and rod responses on full-field ERGs, and irregular pigmentation in the macular area in the younger patients. In addition, 3 of the 4 exhibited nystagmus, and 2 had astigmatism of more than 1.5 diopters, both of which are features considered atypical in CORDX3. Examination of 2 asymptomatic female obligate carriers showed normal funduscopy, visual fields, and color vision, with responses in the low-normal range on ERGs.


Mapping

Using a panel of 39 X-chromosome markers for linkage analysis in a large Finnish family with X-linked cone-rod dystrophy, originally described by Mantyjarvi et al. (2001), Jalkanen et al. (2003) excluded linkage to 2 previously mapped X-linked forms of the disorder and identified a third, which they symbolized COD3, located between markers DXS10042 and DXS8060 on Xp11.4-q13.1. Positive pairwise lod scores greater than 3 were obtained for 4 markers, one of which was monoamine oxidase B (MAOB; 309860) on Xp11.23. In a previously reported family (Bergen et al., 1993; Meire et al., 1994), it was not possible to determine whether the causative locus was CORDX1 (304020) or CORDX3 because of overlap of mapping intervals.

In a large 4-generation German family in which 10 male members had slowly progressive cone-rod dystrophy, Hauke et al. (2013) performed genomewide SNP analysis and identified linkage to 3 regions on the X chromosome, obtaining maximum lod scores of 2.4 for all 3. The linked intervals did not contain the CORDX1-associated RPRG gene (312610), nor did they overlap with the previously identified CORDX2 (300085) region; however, the linked interval at Xp11.3-p11.23 contained the CORDX3-associated gene CACNA1F.


Molecular Genetics

In a large Finnish family with CORDX3, originally described by Mantyjarvi et al. (2001), Jalkanen et al. (2006) identified a splice site mutation in the CACNA1F gene (300110.0007). The mutation cosegregated completely with the disease phenotype in the family, which included 7 affected males, 10 carrier females, and 33 unaffected family members; it was not found in 200 control chromosomes. RNA studies revealed that the mutation caused altered splicing of the CACNA1F transcript, resulting in 5 variants with predicted premature termination and exonic deletions of the encoded protein. Noting that most mutations in CACNA1F had previously been identified in patients with congenital stationary night blindness-2 (CSNB2; 300071), Jalkanen et al. (2006) stated that CORDX3 is distinguishable from CSNB2 in that it is progressive, can begin in adulthood, has no nystagmus or hyperopic refraction, has only low grade astigmatism, and in dark adaptation lacks cone threshold and has small or no elevation of rod threshold.

By whole-exome sequencing in 47 Chinese probands with CORD, Huang et al. (2013) identified 1 male proband with a missense mutation in the CACNA1F gene (G848S; 300110.0009). Only limited clinical information was reported; the authors stated that all probands with identified mutations had an early-onset severe form of retinal dystrophy with predominantly cone involvement, and that fundus changes were primarily in the macular regions, with mild pigmentary changes and loss of foveal reflex.

In a large German family in which 10 male members exhibited progressive cone-rod dystrophy mapping to chromosome Xp11.3-p11.23, Hauke et al. (2013) performed next-generation sequencing and identified a large in-frame deletion encompassing exons 18 to 26 of the CACNA1F gene (300110.0010). The deletion segregated with disease in the family.


REFERENCES

  1. Bergen, A. A., Meire, F., ten Brink, J., Schuurman, E. J., van Ommen, G. J., Delleman, J. W. Additional evidence for a gene locus for progressive cone dystrophy with late rod involvement in Xp21.1-p11,3. Genomics 18: 463-464, 1993. [PubMed: 8288262, related citations] [Full Text]

  2. Hauke, J., Schild, A., Neugebauer, A., Lappa, A., Fricke, J., Fauser, S., Rosler, S., Pannes, A., Zarrinnam, D., Altmuller, J., Motameny, S., Nurnberg, G., Nurnberg, P., Hahnen, E., Beck, B. B. A novel large in-frame deletion within the CACNA1F gene associates with a cone-rod dystrophy 3-like phenotype. PLoS One 8: e76414, 2013. Note: Electronic Article. [PubMed: 24124559, images, related citations] [Full Text]

  3. Huang, L., Zhang, Q., Li, S., Guan, L., Xiao, X., Zhang, J., Jia, X., Sun, W., Zhu, Z., Gao, Y., Yin, Y., Wang, P., Guo, X., Wang, J., Zhang, Q. Exome sequencing of 47 Chinese families with cone-rod dystrophy: mutations in 25 known causative genes. PLoS One 8: e65546, 2013. Note: Electronic Article. [PubMed: 23776498, images, related citations] [Full Text]

  4. Jalkanen, R., Demirci, F. Y., Tyynismaa, H., Bech-Hansen, T., Meindl, A., Peippo, M., Mantyjarvi, M., Gorin, M. B., Alitalo, T. A new genetic locus for X linked progressive cone-rod dystrophy. J. Med. Genet. 40: 418-423, 2003. [PubMed: 12807962, related citations] [Full Text]

  5. Jalkanen, R., Mantyjarvi, M., Tobias, R., Isosomppi, J., Sankila, E.-M., Alitalo, T., Bech-Hansen, N. T. X linked cone-rod dystrophy, CORDX3, is caused by a mutation in the CACNA1F gene. (Letter) J. Med. Genet. 43: 699-704, 2006. [PubMed: 16505158, images, related citations] [Full Text]

  6. Mantyjarvi, M., Nurmenniemi, P., Partanen, J., Myohanen, T., Peippo, M., Alitalo, T. Clinical features and a follow-up study in a family with X-linked progressive cone-rod dystrophy. Acta Ophthal. Scand. 79: 359-365, 2001. [PubMed: 11453854, related citations] [Full Text]

  7. Meire, F. M., Bergen, A. A., De Rouck, A., Leys, M., Delleman, J. W. X linked progressive cone dystrophy: localisation of the gene locus to Xp21-p11.1 by linkage analysis. Brit. J. Ophthal. 78: 103-108, 1994. [PubMed: 8123616, related citations] [Full Text]


Marla J. F. O'Neill - updated : 10/28/2015
Marla J. F. O'Neill - updated : 8/31/2006
Creation Date:
Victor A. McKusick : 2/3/2004
carol : 10/28/2015
carol : 3/29/2012
terry : 12/22/2009
terry : 9/10/2008
carol : 11/22/2006
wwang : 9/1/2006
terry : 8/31/2006
tkritzer : 7/28/2004
carol : 3/18/2004
carol : 2/5/2004
carol : 2/5/2004
carol : 2/5/2004
tkritzer : 2/5/2004

# 300476

CONE-ROD DYSTROPHY, X-LINKED, 3; CORDX3


ORPHA: 1872;   DO: 0111007;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
Xp11.23 Cone-rod dystrophy, X-linked, 3 300476 X-linked recessive 3 CACNA1F 300110

TEXT

A number sign (#) is used with this entry because of evidence that X-linked cone-rod dystrophy-3 (CORDX3) is caused by mutation in the CACNA1F gene (300110) on chromosome Xp11.


Description

Cone-rod dystrophy is a retinal disorder with predominantly cone involvement. Rod impairment may occur at the same time as the cone impairment or appear later. Patients with CORD usually have reduced visual acuity, photophobia, and color vision defects (summary by Huang et al., 2013).

For a discussion of genetic heterogeneity of X-linked cone-rod dystrophy, see 304020.


Clinical Features

Mantyjarvi et al. (2001) described a large 6-generation Finnish family in which 10 male members, ranging in age from 6 to 81 years, had progressive cone-rod dystrophy. Onset of symptoms was in early childhood for most patients, although some were not diagnosed until the fourth or fifth decade of life. Visual acuities ranged from 20/40 to counting fingers, and all were myopic. Concentrically constricted visual fields were observed in 5 patients, 1 of whom also had central scotomas; of the remaining 5, 3 showed general reduction of sensitivity in the central fields. Of 7 patients in whom color vision was assessed, 6 had red/green or red defects and 1 showed normal color vision. Of 5 patients in whom dark adaptation was examined, all had an elevated rod threshold and 3 also had an elevated cone threshold. Of 5 patients in whom ERG was performed, all exhibited defective cone responses, with 1 also showing reduction of the rod response. Funduscopic examination showed myopic changes and irregular pigmentation in the macular area. Two patients underwent surgery for unilateral retinal detachment. Follow-up over 12 to 14 years of 4 affected family members showed no changes in fundus appearance, visual fields, or dark adaptation; however, visual acuity had decreased in 1 patient, reduced sensitivity of the visual fields was noted in 2, and error scores in the Farnsworth-Munsell 100-hue (FM100) test had increased in 3, suggesting retinal progression of the disease. Examination of 6 obligate carriers showed normal fundi, visual fields, and color vision.

Hauke et al. (2013) examined 4 of 10 affected male members over 3 generations of a large German family with a progressive retinal disorder. Features typical of X-linked cone-rod dystrophy in these patients included slowly progressive loss of visual acuity, moderate to high myopia, color vision defects, elevated cone and rod thresholds in dark adaptation, reduced cone and rod responses on full-field ERGs, and irregular pigmentation in the macular area in the younger patients. In addition, 3 of the 4 exhibited nystagmus, and 2 had astigmatism of more than 1.5 diopters, both of which are features considered atypical in CORDX3. Examination of 2 asymptomatic female obligate carriers showed normal funduscopy, visual fields, and color vision, with responses in the low-normal range on ERGs.


Mapping

Using a panel of 39 X-chromosome markers for linkage analysis in a large Finnish family with X-linked cone-rod dystrophy, originally described by Mantyjarvi et al. (2001), Jalkanen et al. (2003) excluded linkage to 2 previously mapped X-linked forms of the disorder and identified a third, which they symbolized COD3, located between markers DXS10042 and DXS8060 on Xp11.4-q13.1. Positive pairwise lod scores greater than 3 were obtained for 4 markers, one of which was monoamine oxidase B (MAOB; 309860) on Xp11.23. In a previously reported family (Bergen et al., 1993; Meire et al., 1994), it was not possible to determine whether the causative locus was CORDX1 (304020) or CORDX3 because of overlap of mapping intervals.

In a large 4-generation German family in which 10 male members had slowly progressive cone-rod dystrophy, Hauke et al. (2013) performed genomewide SNP analysis and identified linkage to 3 regions on the X chromosome, obtaining maximum lod scores of 2.4 for all 3. The linked intervals did not contain the CORDX1-associated RPRG gene (312610), nor did they overlap with the previously identified CORDX2 (300085) region; however, the linked interval at Xp11.3-p11.23 contained the CORDX3-associated gene CACNA1F.


Molecular Genetics

In a large Finnish family with CORDX3, originally described by Mantyjarvi et al. (2001), Jalkanen et al. (2006) identified a splice site mutation in the CACNA1F gene (300110.0007). The mutation cosegregated completely with the disease phenotype in the family, which included 7 affected males, 10 carrier females, and 33 unaffected family members; it was not found in 200 control chromosomes. RNA studies revealed that the mutation caused altered splicing of the CACNA1F transcript, resulting in 5 variants with predicted premature termination and exonic deletions of the encoded protein. Noting that most mutations in CACNA1F had previously been identified in patients with congenital stationary night blindness-2 (CSNB2; 300071), Jalkanen et al. (2006) stated that CORDX3 is distinguishable from CSNB2 in that it is progressive, can begin in adulthood, has no nystagmus or hyperopic refraction, has only low grade astigmatism, and in dark adaptation lacks cone threshold and has small or no elevation of rod threshold.

By whole-exome sequencing in 47 Chinese probands with CORD, Huang et al. (2013) identified 1 male proband with a missense mutation in the CACNA1F gene (G848S; 300110.0009). Only limited clinical information was reported; the authors stated that all probands with identified mutations had an early-onset severe form of retinal dystrophy with predominantly cone involvement, and that fundus changes were primarily in the macular regions, with mild pigmentary changes and loss of foveal reflex.

In a large German family in which 10 male members exhibited progressive cone-rod dystrophy mapping to chromosome Xp11.3-p11.23, Hauke et al. (2013) performed next-generation sequencing and identified a large in-frame deletion encompassing exons 18 to 26 of the CACNA1F gene (300110.0010). The deletion segregated with disease in the family.


REFERENCES

  1. Bergen, A. A., Meire, F., ten Brink, J., Schuurman, E. J., van Ommen, G. J., Delleman, J. W. Additional evidence for a gene locus for progressive cone dystrophy with late rod involvement in Xp21.1-p11,3. Genomics 18: 463-464, 1993. [PubMed: 8288262] [Full Text: https://doi.org/10.1006/geno.1993.1504]

  2. Hauke, J., Schild, A., Neugebauer, A., Lappa, A., Fricke, J., Fauser, S., Rosler, S., Pannes, A., Zarrinnam, D., Altmuller, J., Motameny, S., Nurnberg, G., Nurnberg, P., Hahnen, E., Beck, B. B. A novel large in-frame deletion within the CACNA1F gene associates with a cone-rod dystrophy 3-like phenotype. PLoS One 8: e76414, 2013. Note: Electronic Article. [PubMed: 24124559] [Full Text: https://doi.org/10.1371/journal.pone.0076414]

  3. Huang, L., Zhang, Q., Li, S., Guan, L., Xiao, X., Zhang, J., Jia, X., Sun, W., Zhu, Z., Gao, Y., Yin, Y., Wang, P., Guo, X., Wang, J., Zhang, Q. Exome sequencing of 47 Chinese families with cone-rod dystrophy: mutations in 25 known causative genes. PLoS One 8: e65546, 2013. Note: Electronic Article. [PubMed: 23776498] [Full Text: https://doi.org/10.1371/journal.pone.0065546]

  4. Jalkanen, R., Demirci, F. Y., Tyynismaa, H., Bech-Hansen, T., Meindl, A., Peippo, M., Mantyjarvi, M., Gorin, M. B., Alitalo, T. A new genetic locus for X linked progressive cone-rod dystrophy. J. Med. Genet. 40: 418-423, 2003. [PubMed: 12807962] [Full Text: https://doi.org/10.1136/jmg.40.6.418]

  5. Jalkanen, R., Mantyjarvi, M., Tobias, R., Isosomppi, J., Sankila, E.-M., Alitalo, T., Bech-Hansen, N. T. X linked cone-rod dystrophy, CORDX3, is caused by a mutation in the CACNA1F gene. (Letter) J. Med. Genet. 43: 699-704, 2006. [PubMed: 16505158] [Full Text: https://doi.org/10.1136/jmg.2006.040741]

  6. Mantyjarvi, M., Nurmenniemi, P., Partanen, J., Myohanen, T., Peippo, M., Alitalo, T. Clinical features and a follow-up study in a family with X-linked progressive cone-rod dystrophy. Acta Ophthal. Scand. 79: 359-365, 2001. [PubMed: 11453854] [Full Text: https://doi.org/10.1034/j.1600-0420.2001.079004359.x]

  7. Meire, F. M., Bergen, A. A., De Rouck, A., Leys, M., Delleman, J. W. X linked progressive cone dystrophy: localisation of the gene locus to Xp21-p11.1 by linkage analysis. Brit. J. Ophthal. 78: 103-108, 1994. [PubMed: 8123616] [Full Text: https://doi.org/10.1136/bjo.78.2.103]


Contributors:
Marla J. F. O'Neill - updated : 10/28/2015
Marla J. F. O'Neill - updated : 8/31/2006

Creation Date:
Victor A. McKusick : 2/3/2004

Edit History:
carol : 10/28/2015
carol : 3/29/2012
terry : 12/22/2009
terry : 9/10/2008
carol : 11/22/2006
wwang : 9/1/2006
terry : 8/31/2006
tkritzer : 7/28/2004
carol : 3/18/2004
carol : 2/5/2004
carol : 2/5/2004
carol : 2/5/2004
tkritzer : 2/5/2004