Entry - #156200 - INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 1; MRD1 - OMIM
# 156200

INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 1; MRD1


Alternative titles; symbols

MENTAL RETARDATION, AUTOSOMAL DOMINANT 1


Other entities represented in this entry:

CHROMOSOME 2q23.1 DELETION SYNDROME, INCLUDED
CHROMOSOME 2q23.1 DUPLICATION SYNDROME, INCLUDED

Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
2q23.1 Intellectual developmental disorder, autosomal dominant 1 156200 AD 3 MBD5 611472
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
GROWTH
Height
- Short stature (deletion patients)
Other
- Postnatal growth retardation (deletion patients)
HEAD & NECK
Head
- Microcephaly (deletion patients)
- Frontal bossing
Face
- Broad forehead
- Small chin
- Micrognathia
- Retrognathia
Ears
- Outer ear abnormalities (deletion patients)
- Prominent ears
- Small ears with large lobules
- Large simple ears
- Cupped ears
- Low-set ears
- Abnormal ears
Eyes
- Esotropia
- Myopia
- Astigmatism
- Hypermetropia
- Poor vision
- Thick eyebrows
- Arched eyebrows
Nose
- Small bulbous nose (younger individuals)
- Large prominent nose (older individuals)
Mouth
- Thin upper lip
- Open mouth (deletion patients)
- Wide mouth (deletion patients)
- Thick everted lower lip (deletion patients)
- Downturned corners of the mouth (deletion patients)
Teeth
- Widely spaced teeth
ABDOMEN
Gastrointestinal
- Feeding difficulties in infancy
SKELETAL
Hands
- Small hands (deletion patients)
Feet
- Small feet (deletion patients)
- Sandal gap between first and second toes
SKIN, NAILS, & HAIR
Hair
- Thick eyebrows
MUSCLE, SOFT TISSUES
- Hypotonia, infantile
NEUROLOGIC
Central Nervous System
- Mental retardation
- Delayed motor development
- Language impairment
- Ataxia (deletion patients)
- Febrile seizures in infancy
- Non-febrile seizures later
- Sleep abnormalities
Behavioral Psychiatric Manifestations
- Hypoactivity
- Limited social interactions
- Aggressive behavior
- Self-injurious behavior
- Short attention span
- Autistic features
- Hyperphagia (deletion patients)
MISCELLANEOUS
- Those with larger deletions of chromosome 2q23.1 tend to have more dysmorphic features
MOLECULAR BASIS
- Caused by mutation in the methyl-CpG-binding domain protein 5 gene (MBD5, 611472.0001)
Intellectual developmental disorder, autosomal dominant - PS156200 - 67 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.11 Coffin-Siris syndrome 2 AD 3 614607 ARID1A 603024
1q21.3 White-Sutton syndrome AD 3 616364 POGZ 614787
1q21.3 GAND syndrome AD 3 615074 GATAD2B 614998
1q22 Intellectual developmental disorder, autosomal dominant 52 AD 3 617796 ASH1L 607999
1q25.3 Intellectual developmental disorder, autosomal dominant 75 AD 3 620988 DHX9 603115
1q44 Intellectual developmental disorder, autosomal dominant 22 AD 3 612337 ZBTB18 608433
2p25.3 Intellectual developmental disorder, autosomal dominant 39 AD 3 616521 MYT1L 613084
2q11.2 ?Intellectual developmental disorder, autosomal dominant 69 AD 3 617863 LMAN2L 609552
2q23.1 Intellectual developmental disorder, autosomal dominant 1 AD 3 156200 MBD5 611472
3p25.3 Intellectual developmental disorder, autosomal dominant 23 AD 3 615761 SETD5 615743
3p21.31 Intellectual developmental disorder, autosomal dominant 70 AD 3 620157 SETD2 612778
3q22.3 Intellectual developmental disorder, autosomal dominant 47 AD 3 617635 STAG1 604358
3q26.32 Intellectual developmental disorder, autosomal dominant 41 AD 3 616944 TBL1XR1 608628
3q27.1 Intellectual developmental disorder 60 with seizures AD 3 618587 AP2M1 601024
4q31.1 Intellectual developmental disorder, autosomal dominant 50, with behavioral abnormalities AD 3 617787 NAA15 608000
5p15.2 Intellectual developmental disorder, autosomal dominant 63, with macrocephaly AD 3 618825 TRIO 601893
5p15.2 Intellectual developmental disorder, autosomal dominant 44, with microcephaly AD 3 617061 TRIO 601893
5q13.3 Neurodevelopmental disorder with hypotonia, speech delay, and dysmorphic facies AD 3 616351 CERT1 604677
5q32 Intellectual developmental disorder, autosomal dominant 53 AD 3 617798 CAMK2A 114078
5q33.2 Intellectual developmental disorder, autosomal dominant 67 AD 3 619927 GRIA1 138248
6p21.32 Intellectual developmental disorder, autosomal dominant 5 AD 3 612621 SYNGAP1 603384
6q13 Intellectual developmental disorder, autosomal dominant 46 AD 3 617601 KCNQ5 607357
6q14.3 Intellectual developmental disorder, autosomal dominant 64 AD 3 619188 ZNF292 616213
6q22.1 Intellectual developmental disorder, autosomal dominant 55, with seizures AD 3 617831 NUS1 610463
6q24.2 Intellectual developmental disorder, autosomal dominant 43 AD 3 616977 HIVEP2 143054
6q25.3 Coffin-Siris syndrome 1 AD 3 135900 ARID1B 614556
7p22.1 Intellectual developmental disorder, autosomal dominant 48 AD 3 617751 RAC1 602048
7p13 Intellectual developmental disorder, autosomal dominant 54 AD 3 617799 CAMK2B 607707
7q11.22 Intellectual developmental disorder, autosomal dominant 26 AD 3 615834 AUTS2 607270
7q36.2 Intellectual developmental disorder, autosomal dominant 33 AD 3 616311 DPP6 126141
9p24 Intellectual developmental disorder, autosomal dominant 2 AD 4 614113 MRD2 614113
9q34.11 Intellectual developmental disorder, autosomal dominant 58 AD 3 618106 SET 600960
9q34.3 Kleefstra syndrome 1 AD 3 610253 EHMT1 607001
10p15.3 Intellectual developmental disorder, autosomal dominant 30 AD 3 616083 ZMYND11 608668
10q22.2 Intellectual developmental disorder, autosomal dominant 59 AD 3 618522 CAMK2G 602123
11p15.5 Vulto-van Silfout-de Vries syndrome AD 3 615828 DEAF1 602635
11q13.1 Coffin-Siris syndrome 7 AD 3 618027 DPF2 601671
11q13.1-q13.2 Schuurs-Hoeijmakers syndrome AD 3 615009 PACS1 607492
11q13.2 Intellectual developmental disorder, autosomal dominant 51 AD 3 617788 KMT5B 610881
11q24.2 Intellectual developmental disorder, autosomal dominant 4 AD 2 612581 MRD4 612581
12p13.1 Intellectual developmental disorder, autosomal dominant 6, with or without seizures AD 3 613970 GRIN2B 138252
12q12 Coffin-Siris syndrome 6 AD 3 617808 ARID2 609539
12q13.12 Intellectual developmental disorder, autosomal dominant, FRA12A type AD 3 136630 DIP2B 611379
12q13.2 Coffin-Siris syndrome 8 AD 3 618362 SMARCC2 601734
12q21.33 Intellectual developmental disorder, autosomal dominant 66 AD 3 619910 ATP2B1 108731
14q11.2 Intellectual developmental disorder, autosomal dominant 74 AD 3 620688 HNRNPC 164020
15q21.3 Intellectual developmental disorder, autosomal dominant 71, with behavioral abnormalities AD 3 620330 RFX7 612660
16p13.3 Intellectual developmental disorder, autosomal dominant 72 AD 3 620439 SRRM2 606032
16q22.1 Intellectual developmental disorder, autosomal dominant 21 AD 3 615502 CTCF 604167
16q24.3 Intellectual developmental disorder, autosomal dominant 3 AD 3 612580 CDH15 114019
17p13.1 Intellectual developmental disorder, autosomal dominant 62 AD 3 618793 DLG4 602887
17q21.2 Coffin-Siris syndrome 5 AD 3 616938 SMARCE1 603111
17q21.31 Koolen-De Vries syndrome AD 3 610443 KANSL1 612452
17q23.1 Intellectual developmental disorder, autosomal dominant 56 AD 3 617854 CLTC 118955
17q23.2 Intellectual developmental disorder, autosomal dominant 61 AD 3 618009 MED13 603808
17q23.2 Intellectual developmental disorder, autosomal dominant 57 AD 3 618050 TLK2 608439
18q12.3 Intellectual developmental disorder, autosomal dominant 29 AD 3 616078 SETBP1 611060
19p13.3 Intellectual developmental disorder, autosomal dominant 65 AD 3 619320 KDM4B 609765
19p13.2 Coffin-Siris syndrome 4 AD 3 614609 SMARCA4 603254
19q13.12 Intellectual developmental disorder, autosomal dominant 68 AD 3 619934 KMT2B 606834
19q13.2 Intellectual developmental disorder, autosomal dominant 45 AD 3 617600 CIC 612082
20q11.23 ?Intellectual developmental disorder, autosomal dominant 11 AD 3 614257 EPB41L1 602879
20q13.33 Intellectual developmental disorder, autosomal dominant 73 AD 3 620450 TAF4 601796
20q13.33 Intellectual developmental disorder, autosomal dominant 38 AD 3 616393 EEF1A2 602959
21q22.13 Intellectual developmental disorder, autosomal dominant 7 AD 3 614104 DYRK1A 600855
22q11.23 Coffin-Siris syndrome 3 AD 3 614608 SMARCB1 601607
22q12.3 ?Intellectual developmental disorder, autosomal dominant 10 AD 3 614256 CACNG2 602911

TEXT

A number sign (#) is used with this entry because autosomal dominant intellectual developmental disorder-1 (MRD1) can be caused by heterozygous mutation in or disruption of the MBD5 gene (611472) on chromosome 2q23.1.


Clinical Features

Chromosome 2q23.1 Deletion Syndrome

Wagenstaller et al. (2007) described a boy with severe mental retardation who additionally had a sandal gap between the first and second toe, but no facial dysmorphic features. He showed retarded motor development and had febrile seizures at age 8 months and seizures without fever starting at age 16 months. The boy was hypoactive, and social interactions were limited.

Jaillard et al. (2009) reported 2 unrelated 10-year-old boys, both born to nonconsanguineous French parents, with 2q23.1 microdeletion. Both boys had severe psychomotor retardation and language impairment, microcephaly, seizures, and ataxia.

Van Bon et al. (2010) reported 11 unrelated patients with 2q23.1 deletions, including 9 patients reported for the first time. One of the patients had a similarly affected sib. All were mentally retarded with pronounced speech delay. Additional abnormalities included short stature, seizures, microcephaly, and coarse facies with broad forehead and everted lower lip. The majority of cases presented with stereotypic repetitive behavior, a disturbed sleep pattern, and a broad-based ataxic gait. Less common features included hyperphagia, short hands, and short fifth digits. These features led to the initial clinical impression of Angelman syndrome (105830), Rett syndrome (RTT; 312750), or Smith-Magenis syndrome (SMS; 182290) in several patients.

Williams et al. (2010) reported 2 additional unrelated patients with chromosome 2q23.1 deletion syndrome. The patients had severe developmental and cognitive delay, minimal speech, infantile hypotonia, seizures, microcephaly, mild craniofacial dysmorphism such as wide mouth and tented upper lip, behavioral disorders, and short stature.

From a large international multicenter collaboration, Talkowski et al. (2011) ascertained 65 patients with heterozygous deletion (63 cases) or translocation (2 cases) involving the MBD5 gene. An analysis of 48 phenotypic features showed that most (81.2%) of the features of 2q23.1 deletion syndrome were consistent between both MBD5-specific alterations and larger deletions. All patients had developmental delay, motor delay, seizures, language impairment, and various behavioral problems, including short attention span, self-injurious behavior, aggression, and autistic-like features. Common craniofacial anomalies included thick or arched eyebrows, thin upper lip, widely spaced teeth, and small chin. Eye abnormalities included esotropia, myopia, astigmatism, hypermetropia, and poor vision, and nasal abnormalities included large prominent nose in older individuals and small bulbous nose in younger individuals.

Mullegama et al. (2015) reviewed 74 cases with either MBD5-specific deletions or 2q23.1 deletions, published either as case reports or series. Developmental delay and motor delay were present in 100% of those assessed, while seizures were seen in 85% and severe language impairment in 94%. Infantile hypotonia and feeding difficulties were present in more than 85% assessed while autistic-like behavioral problems were reported in 98%. Attention span difficulties were present in 100%, and sleep disturbances in 79%. Close to 70% had short stature; craniofacial abnormalities included microcephaly in 61%, broad forehead in 70%, and arched/thick eyebrows in 79%.

Chromosome 2q23.1 Duplication Syndrome

Chung et al. (2012) reported 2 patients with developmental delay, hypotonia, and autistic features who had duplications of chromosome region 2q23.1-q23.2. Patient 1, a girl, was born at term to healthy nonconsanguineous parents. The father was of Scottish descent and the mother of African-Caribbean and British descent. Birth weight was at the third percentile, and the patient was hospitalized for 2 weeks with poor feeding and hypotonia. Outer canthal and interpupillary distances were increased, but inner canthal distance was normal. The remainder of the physical examination was unremarkable except for hypotonia. She walked independently at 18 months of age and said her first word at age 2 years. She was diagnosed with global developmental delay at age 4 years. She was diagnosed with autism at age 8 and had a total vocabulary of 20 words. At age 17, examination showed head circumference at the 25 percentile, low anterior hairline, arched eyebrows with lateral ptosis, and bulbous nasal tip. Aggressive behavior was present. Hearing and vision were normal, and she did not have seizures. Patient 2 was an 8-year-old male of nonconsanguineous Caucasian descent referred for genetic evaluation because of developmental delay and autistic features. He had shown poor neonatal feeding, hypotonia, and in the first year of life had experienced gastroesophageal reflux and recurrent vomiting. He had global developmental delay and was unable to walk or talk until the age of 2 years. At age 8 years he performed at the kindergarten level for reading and writing. All growth parameters were above the 98th percentile at 8 years of age. He had subtle facial asymmetry, right hemifacial microsomia, strabismus, high-arched palate, and dental crowding. His nose was long and tubular with a prominent tip, and he had bilateral fifth finger clinodactyly. Seizures were not present.

Autosomal Dominant Intellectual Developmental Disorder 1

Carvill et al. (2013) reported a 20-year-old woman with severe mental retardation and autism spectrum disorder associated with epileptic encephalopathy who had a de novo heterozygous mutation in the MBD5 gene (611472.0002). In infancy, she had delayed development and onset of tonic-clonic seizures at age 6 months. She later developed absence seizures, focal dyscognitive seizures, focal seizures, and tonic seizures associated with multiple EEG abnormalities. The report expanded the phenotype associated with MBD5 mutations.

Le and Ha (2021) reported a patient who had typical development until 1 year of age but speech and motor delays beginning in the second year of life. At 19 months of age, he developed seizures. Neuropsychiatric examination revealed autistic features and a short attention span. At 8 years of age, he had impaired intellectual development and a physical examination demonstrated reduced patellar and triceps deep tendon reflexes, flat feet, bilateral preauricular skin tags, a broad forehead, and prominent nasal bridge.


Inheritance

Among 11 patients with chromosome 2q23.1 deletion syndrome, van Bon et al. (2010) found that all with available parent samples had a de novo deletion. In 1 family, the presence of the same deletion in 2 affected sibs suggested parental gonadal mosaicism.


Cytogenetics

Chromosome 2q23.1 Deletion Syndrome

In 2 unrelated 10-year-old boys with 2q23.1 deletion, Jaillard et al. (2009) identified an overlapping region of 250 kb that included 2 genes: MBD5 and EPC2 (611000).

In a review of 15 patients with chromosome 2q23.1 deletion syndrome, van Bon et al. (2010) found that the deletion sizes ranged from 250 kb to 5.5 Mb comprising 15 genes. All patients except the sib pairs, had a deletion of at least the MBD5 and EPC2 genes, but the overlapping region contained only MBD5.

Two patients reported by Williams et al. (2010) had 930-kb and 3.51-Mb deletions at chromosome 2q23.1, respectively. RT-PCR of patient lymphoblasts or lymphocytes showed an approximately 50% reduced expression of the MBD5 and EPC2 genes compared to controls.

From a large international multicenter collaboration, Talkowski et al. (2011) ascertained 65 patients with heterozygous deletion (63 cases) or translocation (2 cases) involving chromosome 2q23.1. The deletions ranged in size from 38 kb to greater than 19 Mb. The smallest region of overlap in all cases was confined to 1 gene, MBD5, and 14 (21.5%) of the 65 microdeletions and translocations were exclusively localized to MBD5, including several deletions that were restricted to noncoding regions and did not alter the protein sequence. The deletions or translocations were associated with haploinsufficiency of the MBD5 gene (22.5 to 55.4% of controls), as determined by mRNA expression analysis.

Chromosome 2q23.1 Duplication Syndrome

The 2 patients described by Chung et al. (2012) with developmental delay, hypotonia, and autistic features carried overlapping microduplications of chromosome 2q23.1-q23.2 involving 8 genes, including MBD5 (611472) and EPC2 (611000). The duplication in patient 1 was estimated to be 1.64 Mb and was represented by oligonucleotide probes from positions chr2:148,691,798-chr2:150,343,042 (NCBI37/hg19). The approximately 2-Mb duplication in patient 2 had a maximum interval of chr2:148,186,210-150,188,492 and a minimum interval of chr2:148,616,673-150,420,742 (NCBI37/hg19). The duplication in patient 2 was demonstrated to be a de novo occurrence. Real-time qRT-PCR of lymphocytes from patient 1 showed overexpression of MBD5 and EPC2.


Molecular Genetics

In the patient described by Wagenstaller et al. (2007) with severe mental retardation and seizures, the authors found a 200-kb deletion in the MBD5 gene (611472.0001). The deletion region was present in parental DNA. They authors also identified 4 missense variants in MBD5 among 415 DNAs from children with mental retardation that were not present in 660 controls.

Talkowski et al. (2011) identified MBD5 deletions in approximately 0.18% of patients with autism from 2 large cohorts (1,786 and 2,275 patients, respectively), whereas deletions at this locus were not found in 7,878 controls. Moreover, there was a significant association between a gly79-to-glu (G79E) missense variant in a highly conserved methyl-CpG-binding domain in 747 patients with autism spectrum disorder compared with 2,043 controls (odds ratio of 5.47, p = 0.012). The results suggested that alterations of MBD5 predispose to the risk of autism spectrum disorders. Talkowski et al. (2011) noted that the MBD5 gene belongs to a family of genes involved in DNA methylation and/or chromatin remodeling, like MECP2 (300005), which is mutant or deleted in Rett syndrome (RTT; 312750), intellectual disabilities, and autism, providing further evidence that alterations of MBD5 may predispose to the risk of these neurodevelopmental disorders.

Carvill et al. (2013) identified a de novo heterozygous truncating mutation in the MBD5 gene (611472.0002) in a 20-year-old woman with severe mental retardation and epileptic encephalopathy.

In a patient with some features of Kleefstra syndrome (610253), Kleefstra et al. (2012) detected a frameshift mutation in the MBD5 gene (611472.0003). The patient was 1 of 9 patients with syndromic mental retardation who shared core features of Kleefstra syndrome but were phenotypically heterogeneous otherwise, with a phenotype referred to by the authors as Kleefstra syndrome spectrum (KSS) .

In an 8-year-old Vietnamese boy with MRD1, Le and Ha (2021) identified a heterozygous splice site mutation in the MBD5 gene (611472.0004). The mutations was identified by next-generation sequencing and confirmed by Sanger sequencing.


Genotype/Phenotype Correlations

In a phenotypic comparison of 14 patients with deletions of chromosome 2q23.1 limited to the MBD5 gene and 51 patients with larger deletions of this region and involving other genes, Talkowski et al. (2011) found that those with larger deletions tended to have more severe craniofacial dysmorphisms, including microcephaly, external ear abnormalities, wide mouth, open mouth, and downturned corners of the mouth. Those with larger deletions also had a higher frequency of ataxia, hyperphagia, postnatal growth retardation, and small hands and feet. These additional features were attributed to the involvement of other deleted genes.


History

In 2 families with undifferentiated mental retardation occurring in members of multiple generations, Dekaban and Klein (1968) concluded that dominant transmission (i.e., a single major gene) could be responsible.


REFERENCES

  1. Carvill, G. L., Heavin, S. B., Yendle, S. C., McMahon, J. M., O'Roak, B. J., Cook, J., Khan, A., Dorschner, M. O., Weaver, M., Calvert, S., Malone, S., Wallace, G., and 22 others. Targeted resequencing in epileptic encephalopathies identifies de novo mutations in CHD2 and SYNGAP1. Nature Genet. 45: 825-830, 2013. [PubMed: 23708187, images, related citations] [Full Text]

  2. Chung, B. H. Y., Mullegama, S., Marshall, C. R., Lionel, A. C., Weksberg, R., Dupuis, L., Brick, L., Li, C., Scherer, S. W., Aradhya, S., Stavropoulos, D. J., Elsea, S. H., Mendoza-Londono, R. Severe intellectual disability and autistic features associated with microduplication 2q23.1. Europ. J. Hum. Genet. 20: 398-403, 2012. [PubMed: 22085900, images, related citations] [Full Text]

  3. Dekaban, A. S., Klein, D. Familial mental retardation. Acta Genet. Statist. Med. 18: 206-228, 1968. [PubMed: 5301685, related citations] [Full Text]

  4. Jaillard, S., Dubourg, C., Gerard-Blanluet, M., Delahaye, A., Pasquier, L., Dupont, C., Henry, C., Tabet, A. C., Lucas, J., Aboura, A., David, V., Benzacken, B., Odent, S., Pipiras, E. 2q23.1 microdeletion identified by array comparative genomic hybridisation: an emerging phenotype with Angelman-like features J. Med. Genet. 46: 847-855, 2009. [PubMed: 18812405, images, related citations] [Full Text]

  5. Kleefstra, T., Kramer, J. M., Neveling, K., Willemsen, M. H., Koemans, T. S., Vissers, L. E. L. M., Wissink-Lindhout, W., Fenckova, M., van den Akker, W. M. R., Nadif Kasri, N., Nillesen, W. M., Prescott, T., and 10 others. Disruption of an EHMT1-associated chromatin-modification module causes intellectual disability. Am. J. Hum. Genet. 91: 73-82, 2012. [PubMed: 22726846, images, related citations] [Full Text]

  6. Le, T. N. U., Ha, T. M. T. MBD5-related intellectual disability in a Vietnamese child. Am. J. Med. Genet. 185A: 1321-1323, 2021. [PubMed: 33427406, related citations] [Full Text]

  7. Mullegama, S. V., Alaimo, J. T., Chen, L., Elsea, S. H. Phenotypic and molecular convergence of 2q23.1 deletion syndrome with other neurodevelopmental syndromes associated with autism spectrum disorder. Int. J. Molec. Sci. 16: 7627-7643, 2015. [PubMed: 25853262, images, related citations] [Full Text]

  8. Talkowski, M. E., Mullegama, S. V., Rosenfeld, J. A., van Bon, B. W. M., Shen, Y., Repnikova, E. A., Gastier-Foster, J., Thrush, D. L., Kathiresan, S., Ruderfer, D. M., Chiang, C., Hanscom, C., and 23 others. Assessment of 2q23.1 microdeletion syndrome implicates MBD5 as a single causal locus of intellectual disability, epilepsy, and autism spectrum disorder. Am. J. Hum. Genet. 89: 551-563, 2011. [PubMed: 21981781, images, related citations] [Full Text]

  9. van Bon, B. W. M., Koolen, D. A., Brueton, L., McMullan, D., Lichtenbelt, K. D., Ades, L. C., Peters, G., Gibson, K., Moloney, S., Novara, F., Pramparo, T., Dalla Bernardina, B., and 20 others. The 2q23.1 microdeletion syndrome: clinical and behavioural phenotype. Europ. J. Hum. Genet. 18: 163-170, 2010. Note: Erratum: Europ. J. Hum. Genet. 18: 170 only, 2010. Erratum: Europ. J. Hum. Genet 18: 1171 only, 2010. [PubMed: 19809484, related citations] [Full Text]

  10. Wagenstaller, J., Spranger, S., Lorenz-Depiereux, B., Kazmierczak, B., Nathrath, M., Wahl, D., Heye, B., Glaser, D., Liebscher, V., Meitinger, T., Strom, T. M. Copy-number variations measured by single-nucleotide-polymorphism oligonucleotide arrays in patients with mental retardation. Am. J. Hum. Genet. 81: 768-779, 2007. [PubMed: 17847001, images, related citations] [Full Text]

  11. Williams, S. R., Mullegama, S. V., Rosenfeld, J. A., Dagli, A. I., Hatchwell, E., Allen, W. P., Williams, C. A., Elsea, S. H. Haploinsufficiency of MBD5 associated with a syndrome involving microcephaly, intellectual disabilities, severe speech impairment, and seizures. Europ. J. Hum. Genet. 18: 436-441, 2010. [PubMed: 19904302, images, related citations] [Full Text]


Hilary J. Vernon - updated : 10/28/2022
Carol A. Bocchini - updated : 10/08/2018
Ada Hamosh - updated : 01/11/2016
Ada Hamosh - updated : 11/26/2013
Cassandra L. Kniffin - updated : 8/15/2013
Victor A. McKusick - updated : 10/12/2007
Creation Date:
Victor A. McKusick : 6/2/1986
carol : 10/28/2022
carol : 10/28/2022
carol : 03/10/2022
carol : 10/08/2018
alopez : 01/11/2016
alopez : 11/26/2013
carol : 8/19/2013
ckniffin : 8/15/2013
carol : 10/24/2011
ckniffin : 10/24/2011
ckniffin : 10/24/2011
alopez : 10/12/2007
mimadm : 11/6/1994
supermim : 3/16/1992
supermim : 3/20/1990
ddp : 10/27/1989
marie : 3/25/1988
reenie : 6/2/1986

# 156200

INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL DOMINANT 1; MRD1


Alternative titles; symbols

MENTAL RETARDATION, AUTOSOMAL DOMINANT 1


Other entities represented in this entry:

CHROMOSOME 2q23.1 DELETION SYNDROME, INCLUDED
CHROMOSOME 2q23.1 DUPLICATION SYNDROME, INCLUDED

ORPHA: 178469, 228402, 313947;   DO: 0070031;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
2q23.1 Intellectual developmental disorder, autosomal dominant 1 156200 Autosomal dominant 3 MBD5 611472

TEXT

A number sign (#) is used with this entry because autosomal dominant intellectual developmental disorder-1 (MRD1) can be caused by heterozygous mutation in or disruption of the MBD5 gene (611472) on chromosome 2q23.1.


Clinical Features

Chromosome 2q23.1 Deletion Syndrome

Wagenstaller et al. (2007) described a boy with severe mental retardation who additionally had a sandal gap between the first and second toe, but no facial dysmorphic features. He showed retarded motor development and had febrile seizures at age 8 months and seizures without fever starting at age 16 months. The boy was hypoactive, and social interactions were limited.

Jaillard et al. (2009) reported 2 unrelated 10-year-old boys, both born to nonconsanguineous French parents, with 2q23.1 microdeletion. Both boys had severe psychomotor retardation and language impairment, microcephaly, seizures, and ataxia.

Van Bon et al. (2010) reported 11 unrelated patients with 2q23.1 deletions, including 9 patients reported for the first time. One of the patients had a similarly affected sib. All were mentally retarded with pronounced speech delay. Additional abnormalities included short stature, seizures, microcephaly, and coarse facies with broad forehead and everted lower lip. The majority of cases presented with stereotypic repetitive behavior, a disturbed sleep pattern, and a broad-based ataxic gait. Less common features included hyperphagia, short hands, and short fifth digits. These features led to the initial clinical impression of Angelman syndrome (105830), Rett syndrome (RTT; 312750), or Smith-Magenis syndrome (SMS; 182290) in several patients.

Williams et al. (2010) reported 2 additional unrelated patients with chromosome 2q23.1 deletion syndrome. The patients had severe developmental and cognitive delay, minimal speech, infantile hypotonia, seizures, microcephaly, mild craniofacial dysmorphism such as wide mouth and tented upper lip, behavioral disorders, and short stature.

From a large international multicenter collaboration, Talkowski et al. (2011) ascertained 65 patients with heterozygous deletion (63 cases) or translocation (2 cases) involving the MBD5 gene. An analysis of 48 phenotypic features showed that most (81.2%) of the features of 2q23.1 deletion syndrome were consistent between both MBD5-specific alterations and larger deletions. All patients had developmental delay, motor delay, seizures, language impairment, and various behavioral problems, including short attention span, self-injurious behavior, aggression, and autistic-like features. Common craniofacial anomalies included thick or arched eyebrows, thin upper lip, widely spaced teeth, and small chin. Eye abnormalities included esotropia, myopia, astigmatism, hypermetropia, and poor vision, and nasal abnormalities included large prominent nose in older individuals and small bulbous nose in younger individuals.

Mullegama et al. (2015) reviewed 74 cases with either MBD5-specific deletions or 2q23.1 deletions, published either as case reports or series. Developmental delay and motor delay were present in 100% of those assessed, while seizures were seen in 85% and severe language impairment in 94%. Infantile hypotonia and feeding difficulties were present in more than 85% assessed while autistic-like behavioral problems were reported in 98%. Attention span difficulties were present in 100%, and sleep disturbances in 79%. Close to 70% had short stature; craniofacial abnormalities included microcephaly in 61%, broad forehead in 70%, and arched/thick eyebrows in 79%.

Chromosome 2q23.1 Duplication Syndrome

Chung et al. (2012) reported 2 patients with developmental delay, hypotonia, and autistic features who had duplications of chromosome region 2q23.1-q23.2. Patient 1, a girl, was born at term to healthy nonconsanguineous parents. The father was of Scottish descent and the mother of African-Caribbean and British descent. Birth weight was at the third percentile, and the patient was hospitalized for 2 weeks with poor feeding and hypotonia. Outer canthal and interpupillary distances were increased, but inner canthal distance was normal. The remainder of the physical examination was unremarkable except for hypotonia. She walked independently at 18 months of age and said her first word at age 2 years. She was diagnosed with global developmental delay at age 4 years. She was diagnosed with autism at age 8 and had a total vocabulary of 20 words. At age 17, examination showed head circumference at the 25 percentile, low anterior hairline, arched eyebrows with lateral ptosis, and bulbous nasal tip. Aggressive behavior was present. Hearing and vision were normal, and she did not have seizures. Patient 2 was an 8-year-old male of nonconsanguineous Caucasian descent referred for genetic evaluation because of developmental delay and autistic features. He had shown poor neonatal feeding, hypotonia, and in the first year of life had experienced gastroesophageal reflux and recurrent vomiting. He had global developmental delay and was unable to walk or talk until the age of 2 years. At age 8 years he performed at the kindergarten level for reading and writing. All growth parameters were above the 98th percentile at 8 years of age. He had subtle facial asymmetry, right hemifacial microsomia, strabismus, high-arched palate, and dental crowding. His nose was long and tubular with a prominent tip, and he had bilateral fifth finger clinodactyly. Seizures were not present.

Autosomal Dominant Intellectual Developmental Disorder 1

Carvill et al. (2013) reported a 20-year-old woman with severe mental retardation and autism spectrum disorder associated with epileptic encephalopathy who had a de novo heterozygous mutation in the MBD5 gene (611472.0002). In infancy, she had delayed development and onset of tonic-clonic seizures at age 6 months. She later developed absence seizures, focal dyscognitive seizures, focal seizures, and tonic seizures associated with multiple EEG abnormalities. The report expanded the phenotype associated with MBD5 mutations.

Le and Ha (2021) reported a patient who had typical development until 1 year of age but speech and motor delays beginning in the second year of life. At 19 months of age, he developed seizures. Neuropsychiatric examination revealed autistic features and a short attention span. At 8 years of age, he had impaired intellectual development and a physical examination demonstrated reduced patellar and triceps deep tendon reflexes, flat feet, bilateral preauricular skin tags, a broad forehead, and prominent nasal bridge.


Inheritance

Among 11 patients with chromosome 2q23.1 deletion syndrome, van Bon et al. (2010) found that all with available parent samples had a de novo deletion. In 1 family, the presence of the same deletion in 2 affected sibs suggested parental gonadal mosaicism.


Cytogenetics

Chromosome 2q23.1 Deletion Syndrome

In 2 unrelated 10-year-old boys with 2q23.1 deletion, Jaillard et al. (2009) identified an overlapping region of 250 kb that included 2 genes: MBD5 and EPC2 (611000).

In a review of 15 patients with chromosome 2q23.1 deletion syndrome, van Bon et al. (2010) found that the deletion sizes ranged from 250 kb to 5.5 Mb comprising 15 genes. All patients except the sib pairs, had a deletion of at least the MBD5 and EPC2 genes, but the overlapping region contained only MBD5.

Two patients reported by Williams et al. (2010) had 930-kb and 3.51-Mb deletions at chromosome 2q23.1, respectively. RT-PCR of patient lymphoblasts or lymphocytes showed an approximately 50% reduced expression of the MBD5 and EPC2 genes compared to controls.

From a large international multicenter collaboration, Talkowski et al. (2011) ascertained 65 patients with heterozygous deletion (63 cases) or translocation (2 cases) involving chromosome 2q23.1. The deletions ranged in size from 38 kb to greater than 19 Mb. The smallest region of overlap in all cases was confined to 1 gene, MBD5, and 14 (21.5%) of the 65 microdeletions and translocations were exclusively localized to MBD5, including several deletions that were restricted to noncoding regions and did not alter the protein sequence. The deletions or translocations were associated with haploinsufficiency of the MBD5 gene (22.5 to 55.4% of controls), as determined by mRNA expression analysis.

Chromosome 2q23.1 Duplication Syndrome

The 2 patients described by Chung et al. (2012) with developmental delay, hypotonia, and autistic features carried overlapping microduplications of chromosome 2q23.1-q23.2 involving 8 genes, including MBD5 (611472) and EPC2 (611000). The duplication in patient 1 was estimated to be 1.64 Mb and was represented by oligonucleotide probes from positions chr2:148,691,798-chr2:150,343,042 (NCBI37/hg19). The approximately 2-Mb duplication in patient 2 had a maximum interval of chr2:148,186,210-150,188,492 and a minimum interval of chr2:148,616,673-150,420,742 (NCBI37/hg19). The duplication in patient 2 was demonstrated to be a de novo occurrence. Real-time qRT-PCR of lymphocytes from patient 1 showed overexpression of MBD5 and EPC2.


Molecular Genetics

In the patient described by Wagenstaller et al. (2007) with severe mental retardation and seizures, the authors found a 200-kb deletion in the MBD5 gene (611472.0001). The deletion region was present in parental DNA. They authors also identified 4 missense variants in MBD5 among 415 DNAs from children with mental retardation that were not present in 660 controls.

Talkowski et al. (2011) identified MBD5 deletions in approximately 0.18% of patients with autism from 2 large cohorts (1,786 and 2,275 patients, respectively), whereas deletions at this locus were not found in 7,878 controls. Moreover, there was a significant association between a gly79-to-glu (G79E) missense variant in a highly conserved methyl-CpG-binding domain in 747 patients with autism spectrum disorder compared with 2,043 controls (odds ratio of 5.47, p = 0.012). The results suggested that alterations of MBD5 predispose to the risk of autism spectrum disorders. Talkowski et al. (2011) noted that the MBD5 gene belongs to a family of genes involved in DNA methylation and/or chromatin remodeling, like MECP2 (300005), which is mutant or deleted in Rett syndrome (RTT; 312750), intellectual disabilities, and autism, providing further evidence that alterations of MBD5 may predispose to the risk of these neurodevelopmental disorders.

Carvill et al. (2013) identified a de novo heterozygous truncating mutation in the MBD5 gene (611472.0002) in a 20-year-old woman with severe mental retardation and epileptic encephalopathy.

In a patient with some features of Kleefstra syndrome (610253), Kleefstra et al. (2012) detected a frameshift mutation in the MBD5 gene (611472.0003). The patient was 1 of 9 patients with syndromic mental retardation who shared core features of Kleefstra syndrome but were phenotypically heterogeneous otherwise, with a phenotype referred to by the authors as Kleefstra syndrome spectrum (KSS) .

In an 8-year-old Vietnamese boy with MRD1, Le and Ha (2021) identified a heterozygous splice site mutation in the MBD5 gene (611472.0004). The mutations was identified by next-generation sequencing and confirmed by Sanger sequencing.


Genotype/Phenotype Correlations

In a phenotypic comparison of 14 patients with deletions of chromosome 2q23.1 limited to the MBD5 gene and 51 patients with larger deletions of this region and involving other genes, Talkowski et al. (2011) found that those with larger deletions tended to have more severe craniofacial dysmorphisms, including microcephaly, external ear abnormalities, wide mouth, open mouth, and downturned corners of the mouth. Those with larger deletions also had a higher frequency of ataxia, hyperphagia, postnatal growth retardation, and small hands and feet. These additional features were attributed to the involvement of other deleted genes.


History

In 2 families with undifferentiated mental retardation occurring in members of multiple generations, Dekaban and Klein (1968) concluded that dominant transmission (i.e., a single major gene) could be responsible.


REFERENCES

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Contributors:
Hilary J. Vernon - updated : 10/28/2022
Carol A. Bocchini - updated : 10/08/2018
Ada Hamosh - updated : 01/11/2016
Ada Hamosh - updated : 11/26/2013
Cassandra L. Kniffin - updated : 8/15/2013
Victor A. McKusick - updated : 10/12/2007

Creation Date:
Victor A. McKusick : 6/2/1986

Edit History:
carol : 10/28/2022
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