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<h3>Seq-inst</h3><pre>Defined in file <a href="seq.asn.html">seq.asn</a>
C++ class: <a href="../doxyhtml/classCSeq__inst.html">CSeq_inst</a>
Seq-inst ::= SEQUENCE { -- the sequence data itself
repr ENUMERATED { -- representation class
not-set (0) , -- empty
virtual (1) , -- no seq data
raw (2) , -- continuous sequence
seg (3) , -- segmented sequence
const (4) , -- constructed sequence
ref (5) , -- reference to another sequence
consen (6) , -- consensus sequence or pattern
map (7) , -- ordered map of any kind
delta (8) , -- sequence made by changes (delta) to others
other (255) } ,
mol ENUMERATED { -- molecule class in living organism
not-set (0) , -- > cdna = rna
dna (1) ,
rna (2) ,
aa (3) ,
na (4) , -- just a nucleic acid
other (255) } ,
length INTEGER OPTIONAL , -- length of sequence in residues
fuzz <a href="Int-fuzz.html">Int-fuzz</a> OPTIONAL , -- length uncertainty
topology ENUMERATED { -- topology of molecule
not-set (0) ,
linear (1) ,
circular (2) ,
tandem (3) , -- some part of tandem repeat
other (255) } DEFAULT linear ,
strand ENUMERATED { -- strandedness in living organism
not-set (0) ,
ss (1) , -- single strand
ds (2) , -- double strand
mixed (3) ,
other (255) } OPTIONAL , -- default ds for DNA, ss for RNA, pept
seq-data <a href="Seq-data.html">Seq-data</a> OPTIONAL , -- the sequence
ext <a href="Seq-ext.html">Seq-ext</a> OPTIONAL , -- extensions for special types
hist <a href="Seq-hist.html">Seq-hist</a> OPTIONAL } -- sequence history</pre>
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