2009/01[PDDAT] AND (complex_dna[filt]) - Structure - NCBI

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Items: 16

Select item 806131.

Molecular Structure Image for 3G2D

Complex of Mth0212 and a 4 bp dsDNA with 3'-overhang[HYDROLASE/DNA]

Taxonomy:: Methanothermobacter thermautotrophicus str. Delta H, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 10
modified:: 2023-11-05

MMDB ID:: 80613
PDB ID:: 3G2D

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 806122.

Molecular Structure Image for 3G2C

Mth0212 in complex with a short ssDNA (CGTA)[HYDROLASE/DNA]

Taxonomy:: Methanothermobacter thermautotrophicus str. Delta H, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 12
modified:: 2023-11-05

MMDB ID:: 80612
PDB ID:: 3G2C

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 806103.

Molecular Structure Image for 3G0R

Complex of Mth0212 and an 8bp dsDNA with distorted ends[HYDROLASE/DNA]

Taxonomy:: Methanothermobacter thermautotrophicus str. Delta H, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 17
modified:: 2023-11-05

MMDB ID:: 80610
PDB ID:: 3G0R

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 806084.

Molecular Structure Image for 3G00

Mth0212 in complex with a 9bp blunt end dsDNA at 1.7 Angstrom[HYDROLASE/DNA]

Taxonomy:: Methanothermobacter thermautotrophicus str. Delta H, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 9
modified:: 2023-11-05

MMDB ID:: 80608
PDB ID:: 3G00

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 781575.

Molecular Structure Image for 3G0Q

Crystal Structure of MutY bound to its inhibitor DNA[HYDROLASE/DNA]

Taxonomy:: Geobacillus stearothermophilus, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2023-09-12

MMDB ID:: 78157
PDB ID:: 3G0Q

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 727746.

Molecular Structure Image for 3FSI

Crystal structure of a trypanocidal 4,4'-Bis(imidazolinylamino)diphenylamine bound to DNA[TRANSFERASE/DNA]

Taxonomy:: Moloney murine leukemia virus, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 12
modified:: 2023-09-12

MMDB ID:: 72774
PDB ID:: 3FSI

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 726867.

Molecular Structure Image for 2KEK

Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3[Transcription/DNA]

Taxonomy:: Escherichia coli K-12, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
modified:: 2024-11-25

MMDB ID:: 72686
PDB ID:: 2KEK

View in iCn3D PubMed Proteins Conserved Domains

Select item 726858.

Molecular Structure Image for 2KEJ

Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O2[Transcription/DNA]

Taxonomy:: Escherichia coli K-12, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
modified:: 2024-11-25

MMDB ID:: 72685
PDB ID:: 2KEJ

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Select item 726849.

Molecular Structure Image for 2KEI

Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1[Transcription/DNA]

Taxonomy:: Escherichia coli K-12, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
modified:: 2024-11-25

MMDB ID:: 72684
PDB ID:: 2KEI

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 7255910.

Molecular Structure Image for 2W9C

Ternary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA with incoming dTTP[TRANSFERASE/DNA]

Taxonomy:: Saccharolobus solfataricus P2, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2023-12-18

MMDB ID:: 72559
PDB ID:: 2W9C

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Select item 7255811.

Molecular Structure Image for 2W9B

Binary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA[TRANSFERASE/DNA]

Taxonomy:: Saccharolobus solfataricus P2, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 2
modified:: 2023-12-18

MMDB ID:: 72558
PDB ID:: 2W9B

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 7255712.

Molecular Structure Image for 2W9A

Ternary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA with incoming dGTP[TRANSFERASE/DNA]

Taxonomy:: Saccharolobus solfataricus P2, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 5
modified:: 2023-12-18

MMDB ID:: 72557
PDB ID:: 2W9A

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 7099913.

Molecular Structure Image for 3FYL

GR DNA binding domain:CGT complex[TRANSCRIPTION/DNA]

Taxonomy:: Rattus norvegicus, synthetic construct

Proteins:: 2
Nucleic acids:: (DNA)
Chemicals:: 5
modified:: 2024-02-27

MMDB ID:: 70999
PDB ID:: 3FYL

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 7030014.

Molecular Structure Image for 2KDZ

Structure of the R2R3 DNA binding domain of MYB1 protein from protozoan parasite trichomonas vaginalis in complex with MRE-1/MRE-2R DNA[TRANSCRIPTION/DNA]

Taxonomy:: Trichomonas vaginalis, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
modified:: 2024-05-29

MMDB ID:: 70300
PDB ID:: 2KDZ

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Select item 6925815.

Molecular Structure Image for 2W8L

Y-family DNA polymerase Dpo4 bypassing N2-naphthyl-guanine adduct in anti orientation[TRANSFERASE/DNA]

Taxonomy:: Saccharolobus solfataricus P2, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2023-12-18

MMDB ID:: 69258
PDB ID:: 2W8L

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 6925716.

Molecular Structure Image for 2W8K

Y-family DNA polymerase Dpo4 bypassing N2-naphthyl-guanine adduct in syn orientation[TRANSFERASE/DNA]

Taxonomy:: Saccharolobus solfataricus P2, synthetic construct

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 4
modified:: 2023-12-18

MMDB ID:: 69257
PDB ID:: 2W8K

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

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Protein Domain Families

Families (13)
Structures with functionally specific protein families
Superfamilies (16)
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Complexes

Protein-Protein (8)
Structures containing multiple proteins
Protein-DNA (16)
Structures containing proteins and DNA
Protein-Chemical (12)
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