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dbSNP Short Genetic Variations

Examples: rs268, BRCA1 and more Advanced search

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs115232898

Current Build 157

Released September 3, 2024

Organism
Homo sapiens
Position
chr1:97699474 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>A / T>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.0005482 (768/1401044, GnomAD_exomes)
C=0.007080 (1874/264690, TOPMED)
C=0.001101 (237/215294, ALFA) (+ 10 more)
C=0.005845 (872/149186, GnomAD_genomes)
C=0.002340 (284/121342, ExAC)
C=0.00989 (778/78694, PAGE_STUDY)
C=0.00753 (98/13006, GO-ESP)
C=0.0070 (45/6404, 1000G_30X)
C=0.0064 (32/5008, 1000G)
C=0.0003 (1/3300, PRJNA289433)
C=0.005 (1/216, Qatari)
T=0.5 (3/6, SGDP_PRJ)
C=0.5 (3/6, SGDP_PRJ)
Clinical Significance
Reported in ClinVar
Gene : Consequence
DPYD : Missense Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 215294 T=0.998899 C=0.001101 0.997826 2.8e-05 0.002146 33
European Sub 179984 T=0.999933 C=0.000067 0.999867 0.0 0.000133 0
African Sub 9366 T=0.9796 C=0.0204 0.959855 0.000641 0.039505 0
African Others Sub 360 T=0.969 C=0.031 0.938889 0.0 0.061111 0
African American Sub 9006 T=0.9800 C=0.0200 0.960693 0.000666 0.038641 1
Asian Sub 6316 T=1.0000 C=0.0000 1.0 0.0 0.0 N/A
East Asian Sub 4466 T=1.0000 C=0.0000 1.0 0.0 0.0 N/A
Other Asian Sub 1850 T=1.0000 C=0.0000 1.0 0.0 0.0 N/A
Latin American 1 Sub 804 T=0.990 C=0.010 0.9801 0.0 0.0199 0
Latin American 2 Sub 974 T=0.999 C=0.001 0.997947 0.0 0.002053 0
South Asian Sub 274 T=1.000 C=0.000 1.0 0.0 0.0 N/A
Other Sub 17576 T=0.99858 C=0.00142 0.997155 0.0 0.002845 0


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
gnomAD v4 - Exomes Global Study-wide 1401044 T=0.9994518 C=0.0005482
gnomAD v4 - Exomes European Sub 1165104 T=0.9999837 C=0.0000163
gnomAD v4 - Exomes South Asian Sub 86232 T=0.99997 C=0.00003
gnomAD v4 - Exomes American Sub 44716 T=0.99917 C=0.00083
gnomAD v4 - Exomes East Asian Sub 39688 T=1.00000 C=0.00000
gnomAD v4 - Exomes African Sub 33448 T=0.97898 C=0.02102
gnomAD v4 - Exomes Ashkenazi Jewish Sub 26090 T=1.00000 C=0.00000
gnomAD v4 - Exomes Middle Eastern sub 5766 T=0.9990 C=0.0010
TopMed Global Study-wide 264690 T=0.992920 C=0.007080
Allele Frequency Aggregator Total Global 215294 T=0.998899 C=0.001101
Allele Frequency Aggregator European Sub 179984 T=0.999933 C=0.000067
Allele Frequency Aggregator Other Sub 17576 T=0.99858 C=0.00142
Allele Frequency Aggregator African Sub 9366 T=0.9796 C=0.0204
Allele Frequency Aggregator Asian Sub 6316 T=1.0000 C=0.0000
Allele Frequency Aggregator Latin American 2 Sub 974 T=0.999 C=0.001
Allele Frequency Aggregator Latin American 1 Sub 804 T=0.990 C=0.010
Allele Frequency Aggregator South Asian Sub 274 T=1.000 C=0.000
gnomAD v4 - Genomes Global Study-wide 149186 T=0.994155 C=0.005845
gnomAD v4 - Genomes European Sub 78590 T=0.99996 C=0.00004
gnomAD v4 - Genomes African Sub 41558 T=0.97981 C=0.02019
gnomAD v4 - Genomes American Sub 15254 T=0.99803 C=0.00197
gnomAD v4 - Genomes East Asian Sub 5186 T=1.0000 C=0.0000
gnomAD v4 - Genomes South Asian Sub 4832 T=1.0000 C=0.0000
gnomAD v4 - Genomes Ashkenazi Jewish Sub 3472 T=1.0000 C=0.0000
gnomAD v4 - Genomes Middle Eastern sub 294 T=1.000 C=0.000
ExAC Global Study-wide 121342 T=0.997660 C=0.002340
ExAC Europe Sub 73310 T=0.99990 C=0.00010
ExAC Asian Sub 25156 T=1.00000 C=0.00000
ExAC American Sub 11570 T=0.99896 C=0.00104
ExAC African Sub 10398 T=0.97461 C=0.02539
ExAC Other Sub 908 T=0.999 C=0.001
The PAGE Study Global Study-wide 78694 T=0.99011 C=0.00989
The PAGE Study AfricanAmerican Sub 32512 T=0.98044 C=0.01956
The PAGE Study Mexican Sub 10810 T=0.99935 C=0.00065
The PAGE Study Asian Sub 8316 T=1.0000 C=0.0000
The PAGE Study PuertoRican Sub 7918 T=0.9929 C=0.0071
The PAGE Study NativeHawaiian Sub 4534 T=1.0000 C=0.0000
The PAGE Study Cuban Sub 4230 T=0.9974 C=0.0026
The PAGE Study Dominican Sub 3828 T=0.9851 C=0.0149
The PAGE Study CentralAmerican Sub 2450 T=0.9980 C=0.0020
The PAGE Study SouthAmerican Sub 1982 T=0.9990 C=0.0010
The PAGE Study NativeAmerican Sub 1258 T=0.9968 C=0.0032
The PAGE Study SouthAsian Sub 856 T=1.000 C=0.000
GO Exome Sequencing Project Global Study-wide 13006 T=0.99247 C=0.00753
GO Exome Sequencing Project European American Sub 8600 T=0.9999 C=0.0001
GO Exome Sequencing Project African American Sub 4406 T=0.9780 C=0.0220
1000Genomes_30X Global Study-wide 6404 T=0.9930 C=0.0070
1000Genomes_30X African Sub 1786 T=0.9765 C=0.0235
1000Genomes_30X Europe Sub 1266 T=1.0000 C=0.0000
1000Genomes_30X South Asian Sub 1202 T=1.0000 C=0.0000
1000Genomes_30X East Asian Sub 1170 T=1.0000 C=0.0000
1000Genomes_30X American Sub 980 T=0.997 C=0.003
1000Genomes Global Study-wide 5008 T=0.9936 C=0.0064
1000Genomes African Sub 1322 T=0.9773 C=0.0227
1000Genomes East Asian Sub 1008 T=1.0000 C=0.0000
1000Genomes Europe Sub 1006 T=1.0000 C=0.0000
1000Genomes South Asian Sub 978 T=1.000 C=0.000
1000Genomes American Sub 694 T=0.997 C=0.003
MxGDAR/Encodat-PGx Global Study-wide 3300 T=0.9997 C=0.0003
MxGDAR/Encodat-PGx MxGDAR Sub 3300 T=0.9997 C=0.0003
Qatari Global Study-wide 216 T=0.995 C=0.005
SGDP_PRJ Global Study-wide 6 T=0.5 C=0.5
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 1 NC_000001.11:g.97699474T>A
GRCh38.p14 chr 1 NC_000001.11:g.97699474T>C
GRCh37.p13 chr 1 NC_000001.10:g.98165030T>A
GRCh37.p13 chr 1 NC_000001.10:g.98165030T>C
DPYD RefSeqGene (LRG_722) NG_008807.2:g.226586A>T
DPYD RefSeqGene (LRG_722) NG_008807.2:g.226586A>G
Gene: DPYD, dihydropyrimidine dehydrogenase (minus strand)
Molecule type Change Amino acid[Codon] SO Term
DPYD transcript variant 2 NM_001160301.1:c. N/A Genic Downstream Transcript Variant
DPYD transcript variant 1 NM_000110.4:c.557A>T Y [TAT] > F [TTT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 NP_000101.2:p.Tyr186Phe Y (Tyr) > F (Phe) Missense Variant
DPYD transcript variant 1 NM_000110.4:c.557A>G Y [TAT] > C [TGT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 NP_000101.2:p.Tyr186Cys Y (Tyr) > C (Cys) Missense Variant
DPYD transcript variant X2 XM_005270562.3:c.557A>T Y [TAT] > F [TTT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X2 XP_005270619.2:p.Tyr186Phe Y (Tyr) > F (Phe) Missense Variant
DPYD transcript variant X2 XM_005270562.3:c.557A>G Y [TAT] > C [TGT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X2 XP_005270619.2:p.Tyr186Cys Y (Tyr) > C (Cys) Missense Variant
DPYD transcript variant X1 XM_017000507.2:c.446A>T Y [TAT] > F [TTT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 XP_016855996.1:p.Tyr149Phe Y (Tyr) > F (Phe) Missense Variant
DPYD transcript variant X1 XM_017000507.2:c.446A>G Y [TAT] > C [TGT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 XP_016855996.1:p.Tyr149Cys Y (Tyr) > C (Cys) Missense Variant
DPYD transcript variant X3 XM_047448076.1:c.329A>T Y [TAT] > F [TTT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X3 XP_047304032.1:p.Tyr110Phe Y (Tyr) > F (Phe) Missense Variant
DPYD transcript variant X3 XM_047448076.1:c.329A>G Y [TAT] > C [TGT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X3 XP_047304032.1:p.Tyr110Cys Y (Tyr) > C (Cys) Missense Variant
DPYD transcript variant X4 XM_047448077.1:c.446A>T Y [TAT] > F [TTT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X4 XP_047304033.1:p.Tyr149Phe Y (Tyr) > F (Phe) Missense Variant
DPYD transcript variant X4 XM_047448077.1:c.446A>G Y [TAT] > C [TGT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X4 XP_047304033.1:p.Tyr149Cys Y (Tyr) > C (Cys) Missense Variant
DPYD transcript variant X5 XM_006710397.4:c.557A>T Y [TAT] > F [TTT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X5 XP_006710460.1:p.Tyr186Phe Y (Tyr) > F (Phe) Missense Variant
DPYD transcript variant X5 XM_006710397.4:c.557A>G Y [TAT] > C [TGT] Coding Sequence Variant
dihydropyrimidine dehydrogenase [NADP(+)] isoform X5 XP_006710460.1:p.Tyr186Cys Y (Tyr) > C (Cys) Missense Variant
DPYD transcript variant X6 XR_001737014.2:n. N/A Genic Downstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: C (allele ID: 105990 )
ClinVar Accession Disease Names Clinical Significance
RCV000086496.9 not provided Not-Provided
RCV000671354.16 Dihydropyrimidine dehydrogenase deficiency Conflicting-Interpretations-Of-Pathogenicity
RCV001787913.9 fluorouracil response - Other Drug-Response
RCV001787914.10 fluorouracil response - Toxicity Drug-Response
RCV002222386.9 not specified Likely-Benign
RCV003964961.1 DPYD-related disorder Likely-Benign
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= A C
GRCh38.p14 chr 1 NC_000001.11:g.97699474= NC_000001.11:g.97699474T>A NC_000001.11:g.97699474T>C
GRCh37.p13 chr 1 NC_000001.10:g.98165030= NC_000001.10:g.98165030T>A NC_000001.10:g.98165030T>C
DPYD RefSeqGene (LRG_722) NG_008807.2:g.226586= NG_008807.2:g.226586A>T NG_008807.2:g.226586A>G
DPYD transcript variant 1 NM_000110.4:c.557= NM_000110.4:c.557A>T NM_000110.4:c.557A>G
DPYD transcript variant 1 NM_000110.3:c.557= NM_000110.3:c.557A>T NM_000110.3:c.557A>G
DPYD transcript variant X5 XM_006710397.4:c.557= XM_006710397.4:c.557A>T XM_006710397.4:c.557A>G
DPYD transcript variant X3 XM_006710397.3:c.557= XM_006710397.3:c.557A>T XM_006710397.3:c.557A>G
DPYD transcript variant X2 XM_006710397.2:c.557= XM_006710397.2:c.557A>T XM_006710397.2:c.557A>G
DPYD transcript variant X3 XM_006710397.1:c.557= XM_006710397.1:c.557A>T XM_006710397.1:c.557A>G
DPYD transcript variant X2 XM_005270562.3:c.557= XM_005270562.3:c.557A>T XM_005270562.3:c.557A>G
DPYD transcript variant X2 XM_005270562.2:c.557= XM_005270562.2:c.557A>T XM_005270562.2:c.557A>G
DPYD transcript variant X2 XM_005270562.1:c.557= XM_005270562.1:c.557A>T XM_005270562.1:c.557A>G
DPYD transcript variant X1 XM_017000507.2:c.446= XM_017000507.2:c.446A>T XM_017000507.2:c.446A>G
DPYD transcript variant X1 XM_017000507.1:c.446= XM_017000507.1:c.446A>T XM_017000507.1:c.446A>G
DPYD transcript variant X3 XM_047448076.1:c.329= XM_047448076.1:c.329A>T XM_047448076.1:c.329A>G
DPYD transcript variant X4 XM_047448077.1:c.446= XM_047448077.1:c.446A>T XM_047448077.1:c.446A>G
dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 NP_000101.2:p.Tyr186= NP_000101.2:p.Tyr186Phe NP_000101.2:p.Tyr186Cys
dihydropyrimidine dehydrogenase [NADP(+)] isoform X5 XP_006710460.1:p.Tyr186= XP_006710460.1:p.Tyr186Phe XP_006710460.1:p.Tyr186Cys
dihydropyrimidine dehydrogenase [NADP(+)] isoform X2 XP_005270619.2:p.Tyr186= XP_005270619.2:p.Tyr186Phe XP_005270619.2:p.Tyr186Cys
dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 XP_016855996.1:p.Tyr149= XP_016855996.1:p.Tyr149Phe XP_016855996.1:p.Tyr149Cys
dihydropyrimidine dehydrogenase [NADP(+)] isoform X3 XP_047304032.1:p.Tyr110= XP_047304032.1:p.Tyr110Phe XP_047304032.1:p.Tyr110Cys
dihydropyrimidine dehydrogenase [NADP(+)] isoform X4 XP_047304033.1:p.Tyr149= XP_047304033.1:p.Tyr149Phe XP_047304033.1:p.Tyr149Cys
dihydropyrimidine dehydrogenase [NADP(+)] isoform X2 XP_005270619.1:p.Tyr186= XP_005270619.1:p.Tyr186Phe XP_005270619.1:p.Tyr186Cys
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

53 SubSNP, 12 Frequency, 6 ClinVar submissions
No Submitter Submission ID Date (Build)
1 1000GENOMES ss218541941 Jul 14, 2010 (132)
2 NHLBI-ESP ss341976724 May 09, 2011 (134)
3 1000GENOMES ss489753623 May 04, 2012 (137)
4 EXOME_CHIP ss491297129 May 04, 2012 (137)
5 ILLUMINA ss534017383 Sep 08, 2015 (146)
6 ILLUMINA ss780879366 Aug 21, 2014 (142)
7 ILLUMINA ss783564961 Aug 21, 2014 (142)
8 1000GENOMES ss1292055559 Aug 21, 2014 (142)
9 CLINVAR ss1536213425 Dec 17, 2014 (142)
10 EVA_EXAC ss1685650341 Apr 01, 2015 (144)
11 ILLUMINA ss1751941301 Sep 08, 2015 (146)
12 ILLUMINA ss1917731626 Feb 12, 2016 (147)
13 WEILL_CORNELL_DGM ss1918669279 Feb 12, 2016 (147)
14 ILLUMINA ss1946002634 Feb 12, 2016 (147)
15 ILLUMINA ss1958296099 Feb 12, 2016 (147)
16 HUMAN_LONGEVITY ss2164918394 Dec 20, 2016 (150)
17 ILLUMINA ss2632552098 Nov 08, 2017 (151)
18 GNOMAD ss2731657546 Nov 08, 2017 (151)
19 GNOMAD ss2746378620 Nov 08, 2017 (151)
20 GNOMAD ss2758487471 Nov 08, 2017 (151)
21 AFFY ss2984868287 Nov 08, 2017 (151)
22 CSIRBIOHTS ss3029637210 Nov 08, 2017 (151)
23 ILLUMINA ss3626162580 Oct 11, 2018 (152)
24 ILLUMINA ss3626162581 Oct 11, 2018 (152)
25 ILLUMINA ss3634338692 Oct 11, 2018 (152)
26 ILLUMINA ss3640046052 Oct 11, 2018 (152)
27 ILLUMINA ss3644498593 Oct 11, 2018 (152)
28 ILLUMINA ss3653640172 Oct 11, 2018 (152)
29 ILLUMINA ss3744348653 Jul 12, 2019 (153)
30 ILLUMINA ss3744639664 Jul 12, 2019 (153)
31 PAGE_CC ss3770827435 Jul 12, 2019 (153)
32 ILLUMINA ss3772140902 Jul 12, 2019 (153)
33 EVA ss3823633598 Apr 25, 2020 (154)
34 SGDP_PRJ ss3849451916 Apr 25, 2020 (154)
35 EVA ss3984447105 Apr 25, 2021 (155)
36 EVA ss3986128460 Apr 25, 2021 (155)
37 TOPMED ss4460215209 Apr 25, 2021 (155)
38 EVA ss6208443978 Nov 02, 2024 (157)
39 EVA ss6284043808 Nov 02, 2024 (157)
40 GNOMAD ss6407782961 Nov 02, 2024 (157)
41 GNOMAD ss6494987525 Nov 02, 2024 (157)
42 1000G_HIGH_COVERAGE ss8243277740 Nov 02, 2024 (157)
43 EVA ss8320589273 Nov 02, 2024 (157)
44 HUGCELL_USP ss8444234076 Nov 02, 2024 (157)
45 EVA ss8512473827 Nov 02, 2024 (157)
46 1000G_HIGH_COVERAGE ss8516094097 Nov 02, 2024 (157)
47 SANFORD_IMAGENETICS ss8624212922 Nov 02, 2024 (157)
48 SANFORD_IMAGENETICS ss8626107007 Nov 02, 2024 (157)
49 EVA ss8847548223 Nov 02, 2024 (157)
50 EVA ss8909421452 Nov 02, 2024 (157)
51 EVA ss8937966046 Nov 02, 2024 (157)
52 EVA ss8979283169 Nov 02, 2024 (157)
53 EVA ss8982330905 Nov 02, 2024 (157)
54 1000Genomes NC_000001.10 - 98165030 Oct 11, 2018 (152)
55 1000Genomes_30X NC_000001.11 - 97699474 Nov 02, 2024 (157)
56 ExAC NC_000001.10 - 98165030 Oct 11, 2018 (152)
57 gnomAD v4 - Exomes NC_000001.11 - 97699474 Nov 02, 2024 (157)
58 gnomAD v4 - Genomes NC_000001.11 - 97699474 Nov 02, 2024 (157)
59 GO Exome Sequencing Project NC_000001.10 - 98165030 Oct 11, 2018 (152)
60 The PAGE Study NC_000001.11 - 97699474 Jul 12, 2019 (153)
61 MxGDAR/Encodat-PGx NC_000001.10 - 98165030 Apr 25, 2021 (155)
62 Qatari NC_000001.10 - 98165030 Apr 25, 2020 (154)
63 SGDP_PRJ NC_000001.10 - 98165030 Apr 25, 2020 (154)
64 TopMed NC_000001.11 - 97699474 Apr 25, 2021 (155)
65 ALFA NC_000001.11 - 97699474 Nov 02, 2024 (157)
66 ClinVar RCV000086496.9 Nov 02, 2024 (157)
67 ClinVar RCV000671354.16 Nov 02, 2024 (157)
68 ClinVar RCV001787913.9 Nov 02, 2024 (157)
69 ClinVar RCV001787914.10 Nov 02, 2024 (157)
70 ClinVar RCV002222386.9 Nov 02, 2024 (157)
71 ClinVar RCV003964961.1 Nov 02, 2024 (157)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs199469520 Dec 28, 2011 (136)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss8512473827 NC_000001.10:98165029:T:A NC_000001.11:97699473:T:A (self)
2817394, 4856273, 92232, 106, 711209, 1468896, ss218541941, ss341976724, ss489753623, ss491297129, ss534017383, ss780879366, ss783564961, ss1292055559, ss1685650341, ss1751941301, ss1917731626, ss1918669279, ss1946002634, ss1958296099, ss2632552098, ss2731657546, ss2746378620, ss2758487471, ss2984868287, ss3029637210, ss3626162580, ss3626162581, ss3634338692, ss3640046052, ss3644498593, ss3653640172, ss3744348653, ss3744639664, ss3772140902, ss3823633598, ss3849451916, ss3984447105, ss3986128460, ss6208443978, ss6284043808, ss8320589273, ss8512473827, ss8624212922, ss8626107007, ss8847548223, ss8937966046, ss8979283169, ss8982330905 NC_000001.10:98165029:T:C NC_000001.11:97699473:T:C (self)
RCV000086496.9, RCV000671354.16, RCV001787913.9, RCV001787914.10, RCV002222386.9, RCV003964961.1, 3620032, 3081295, 21302310, 48904, 23821544, 12412161729, ss1536213425, ss2164918394, ss3770827435, ss4460215209, ss6407782961, ss6494987525, ss8243277740, ss8444234076, ss8516094097, ss8909421452 NC_000001.11:97699473:T:C NC_000001.11:97699473:T:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs115232898

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post825+45319f0