dbSNP Short Genetic Variations
Welcome to the Reference SNP (rs) Report
All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.
Reference SNP (rs) Report
This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.
rs11466445
Current Build 156
Released September 21, 2022
- Organism
- Homo sapiens
- Position
-
chr9:99105256-99105283 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
- Alleles
-
del(GCG)6 / del(GCG)5 / del(GCG)4 …
del(GCG)6 / del(GCG)5 / del(GCG)4 / del(GCG)3 / del(GCG)2 / delGCG / dupGCG / dup(GCG)2 / dup(GCG)3 / dup(GCG)4 / dup(GCG)5 / dup(GCG)6
- Variation Type
- Indel Insertion and Deletion
- Frequency
-
del(GCG)3=0.03428 (561/16364, ALFA)del(GCG)3=0.0513 (256/4988, 1000G)
- Clinical Significance
- Reported in ClinVar
- Gene : Consequence
- TGFBR1 : Inframe Deletion
- Publications
- 20 citations
- Genomic View
- See rs on genome
ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.
Population | Group | Sample Size | Ref Allele | Alt Allele | Ref HMOZ | Alt HMOZ | HTRZ | HWEP |
---|---|---|---|---|---|---|---|---|
Total | Global | 16364 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.96566 | GGCGGCGGCG=0.00000, GGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCG=0.03428, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00006, GGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000 | 0.935949 | 0.004523 | 0.059528 | 32 |
European | Sub | 12644 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.95626 | GGCGGCGGCG=0.00000, GGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCG=0.04366, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00008, GGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000 | 0.918526 | 0.005854 | 0.075621 | 30 |
African | Sub | 2442 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.9975 | GGCGGCGGCG=0.0000, GGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCG=0.0025, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000 | 0.995086 | 0.0 | 0.004914 | 0 |
African Others | Sub | 98 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.99 | GGCGGCGGCG=0.00, GGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCG=0.01, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00 | 0.979592 | 0.0 | 0.020408 | 0 |
African American | Sub | 2344 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.9979 | GGCGGCGGCG=0.0000, GGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCG=0.0021, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000 | 0.995734 | 0.0 | 0.004266 | 0 |
Asian | Sub | 112 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.000 | GGCGGCGGCG=0.000, GGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000 | 1.0 | 0.0 | 0.0 | N/A |
East Asian | Sub | 86 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.00 | GGCGGCGGCG=0.00, GGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00 | 1.0 | 0.0 | 0.0 | N/A |
Other Asian | Sub | 26 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.00 | GGCGGCGGCG=0.00, GGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00 | 1.0 | 0.0 | 0.0 | N/A |
Latin American 1 | Sub | 112 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.000 | GGCGGCGGCG=0.000, GGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000 | 1.0 | 0.0 | 0.0 | N/A |
Latin American 2 | Sub | 530 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.000 | GGCGGCGGCG=0.000, GGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000 | 1.0 | 0.0 | 0.0 | N/A |
South Asian | Sub | 92 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.00 | GGCGGCGGCG=0.00, GGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00 | 1.0 | 0.0 | 0.0 | N/A |
Other | Sub | 432 | GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.993 | GGCGGCGGCG=0.000, GGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCG=0.007, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000 | 0.986111 | 0.0 | 0.013889 | 0 |
Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").
DownloadStudy | Population | Group | Sample Size | Ref Allele | Alt Allele |
---|---|---|---|---|---|
Allele Frequency Aggregator | Total | Global | 16364 | (GGC)9G=0.96566 | del(GCG)6=0.00000, del(GCG)5=0.00000, del(GCG)4=0.00000, del(GCG)3=0.03428, del(GCG)2=0.00000, delGCG=0.00000, dupGCG=0.00006, dup(GCG)2=0.00000, dup(GCG)3=0.00000, dup(GCG)4=0.00000, dup(GCG)5=0.00000 |
Allele Frequency Aggregator | European | Sub | 12644 | (GGC)9G=0.95626 | del(GCG)6=0.00000, del(GCG)5=0.00000, del(GCG)4=0.00000, del(GCG)3=0.04366, del(GCG)2=0.00000, delGCG=0.00000, dupGCG=0.00008, dup(GCG)2=0.00000, dup(GCG)3=0.00000, dup(GCG)4=0.00000, dup(GCG)5=0.00000 |
Allele Frequency Aggregator | African | Sub | 2442 | (GGC)9G=0.9975 | del(GCG)6=0.0000, del(GCG)5=0.0000, del(GCG)4=0.0000, del(GCG)3=0.0025, del(GCG)2=0.0000, delGCG=0.0000, dupGCG=0.0000, dup(GCG)2=0.0000, dup(GCG)3=0.0000, dup(GCG)4=0.0000, dup(GCG)5=0.0000 |
Allele Frequency Aggregator | Latin American 2 | Sub | 530 | (GGC)9G=1.000 | del(GCG)6=0.000, del(GCG)5=0.000, del(GCG)4=0.000, del(GCG)3=0.000, del(GCG)2=0.000, delGCG=0.000, dupGCG=0.000, dup(GCG)2=0.000, dup(GCG)3=0.000, dup(GCG)4=0.000, dup(GCG)5=0.000 |
Allele Frequency Aggregator | Other | Sub | 432 | (GGC)9G=0.993 | del(GCG)6=0.000, del(GCG)5=0.000, del(GCG)4=0.000, del(GCG)3=0.007, del(GCG)2=0.000, delGCG=0.000, dupGCG=0.000, dup(GCG)2=0.000, dup(GCG)3=0.000, dup(GCG)4=0.000, dup(GCG)5=0.000 |
Allele Frequency Aggregator | Latin American 1 | Sub | 112 | (GGC)9G=1.000 | del(GCG)6=0.000, del(GCG)5=0.000, del(GCG)4=0.000, del(GCG)3=0.000, del(GCG)2=0.000, delGCG=0.000, dupGCG=0.000, dup(GCG)2=0.000, dup(GCG)3=0.000, dup(GCG)4=0.000, dup(GCG)5=0.000 |
Allele Frequency Aggregator | Asian | Sub | 112 | (GGC)9G=1.000 | del(GCG)6=0.000, del(GCG)5=0.000, del(GCG)4=0.000, del(GCG)3=0.000, del(GCG)2=0.000, delGCG=0.000, dupGCG=0.000, dup(GCG)2=0.000, dup(GCG)3=0.000, dup(GCG)4=0.000, dup(GCG)5=0.000 |
Allele Frequency Aggregator | South Asian | Sub | 92 | (GGC)9G=1.00 | del(GCG)6=0.00, del(GCG)5=0.00, del(GCG)4=0.00, del(GCG)3=0.00, del(GCG)2=0.00, delGCG=0.00, dupGCG=0.00, dup(GCG)2=0.00, dup(GCG)3=0.00, dup(GCG)4=0.00, dup(GCG)5=0.00 |
1000Genomes | Global | Study-wide | 4988 | (GGC)9G=0.9487 | del(GCG)3=0.0513 |
1000Genomes | African | Sub | 1307 | (GGC)9G=0.9449 | del(GCG)3=0.0551 |
1000Genomes | East Asian | Sub | 1008 | (GGC)9G=0.9921 | del(GCG)3=0.0079 |
1000Genomes | Europe | Sub | 1005 | (GGC)9G=0.9025 | del(GCG)3=0.0975 |
1000Genomes | South Asian | Sub | 975 | (GGC)9G=0.962 | del(GCG)3=0.038 |
1000Genomes | American | Sub | 693 | (GGC)9G=0.941 | del(GCG)3=0.059 |
Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.
Sequence name | Change |
---|---|
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[3] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[4] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[5] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[6] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[7] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[8] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[10] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[11] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[12] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[13] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[14] |
GRCh38.p14 chr 9 | NC_000009.12:g.99105257GCG[15] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[3] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[4] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[5] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[6] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[7] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[8] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[10] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[11] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[12] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[13] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[14] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867539GCG[15] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[3] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[4] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[5] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[6] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[7] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[8] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[10] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[11] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[12] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[13] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[14] |
TGFBR1 RefSeqGene | NG_007461.1:g.5128GCG[15] |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[3] |
AAAAAAAAA [GCGGCGGCGGCGGC… AAAAAAAAA [GCGGCGGCGGCGGCGGCG] > AAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala21_Ala26… NP_004603.1:p.Ala21_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAA (AlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[4] |
AAAAAAAAA [GCGGCGGCGGCGGC… AAAAAAAAA [GCGGCGGCGGCGGCG] > AAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala22_Ala26… NP_004603.1:p.Ala22_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAA (AlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[5] |
AAAAAAAAA [GCGGCGGCGGCG] … AAAAAAAAA [GCGGCGGCGGCG] > AAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala23_Ala26… NP_004603.1:p.Ala23_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAA (AlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[6] |
AAAAAAAAA [GCGGCGGCG] > A… AAAAAAAAA [GCGGCGGCG] > AAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala24_Ala26… NP_004603.1:p.Ala24_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAA (AlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[7] |
AAAAAAAAA [GCGGCG] > AAAA… AAAAAAAAA [GCGGCG] > AAAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala25_Ala26… NP_004603.1:p.Ala25_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAA (AlaAlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[8] |
AAAAAAAAA [GCG] > AAAAAAA… AAAAAAAAA [GCG] > AAAAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor | NP_004603.1:p.Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[10] |
AAAAAAAAA [CTG] > AAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAA [GCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor | NP_004603.1:p.Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[11] |
AAAAAAAAA [CTG] > AAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAA [GCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala25_Ala26… NP_004603.1:p.Ala25_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[12] |
AAAAAAAAA [CTG] > AAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAA [GCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala24_Ala26… NP_004603.1:p.Ala24_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[13] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAA [GCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala23_Ala26… NP_004603.1:p.Ala23_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[14] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [GCGGCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala22_Ala26… NP_004603.1:p.Ala22_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 1 | NM_004612.4:c.52GCG[15] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [GCGGCGGCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 1 precursor |
NP_004603.1:p.Ala21_Ala26… NP_004603.1:p.Ala21_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[3] |
AAAAAAAAA [GCGGCGGCGGCGGC… AAAAAAAAA [GCGGCGGCGGCGGCGGCG] > AAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala21_Al… NP_001124388.1:p.Ala21_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAA (AlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[4] |
AAAAAAAAA [GCGGCGGCGGCGGC… AAAAAAAAA [GCGGCGGCGGCGGCG] > AAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala22_Al… NP_001124388.1:p.Ala22_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAA (AlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[5] |
AAAAAAAAA [GCGGCGGCGGCG] … AAAAAAAAA [GCGGCGGCGGCG] > AAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala23_Al… NP_001124388.1:p.Ala23_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAA (AlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[6] |
AAAAAAAAA [GCGGCGGCG] > A… AAAAAAAAA [GCGGCGGCG] > AAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala24_Al… NP_001124388.1:p.Ala24_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAA (AlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[7] |
AAAAAAAAA [GCGGCG] > AAAA… AAAAAAAAA [GCGGCG] > AAAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala25_Al… NP_001124388.1:p.Ala25_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAA (AlaAlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[8] |
AAAAAAAAA [GCG] > AAAAAAA… AAAAAAAAA [GCG] > AAAAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor | NP_001124388.1:p.Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[10] |
AAAAAAAAA [CTG] > AAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAA [GCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor | NP_001124388.1:p.Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[11] |
AAAAAAAAA [CTG] > AAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAA [GCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala25_Al… NP_001124388.1:p.Ala25_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[12] |
AAAAAAAAA [CTG] > AAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAA [GCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala24_Al… NP_001124388.1:p.Ala24_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[13] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAA [GCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala23_Al… NP_001124388.1:p.Ala23_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[14] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [GCGGCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala22_Al… NP_001124388.1:p.Ala22_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 2 | NM_001130916.3:c.52GCG[15] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [GCGGCGGCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 2 precursor |
NP_001124388.1:p.Ala21_Al… NP_001124388.1:p.Ala21_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[3] |
AAAAAAAAA [GCGGCGGCGGCGGC… AAAAAAAAA [GCGGCGGCGGCGGCGGCG] > AAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala21_Al… NP_001293139.1:p.Ala21_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAA (AlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[4] |
AAAAAAAAA [GCGGCGGCGGCGGC… AAAAAAAAA [GCGGCGGCGGCGGCG] > AAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala22_Al… NP_001293139.1:p.Ala22_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAA (AlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[5] |
AAAAAAAAA [GCGGCGGCGGCG] … AAAAAAAAA [GCGGCGGCGGCG] > AAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala23_Al… NP_001293139.1:p.Ala23_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAA (AlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[6] |
AAAAAAAAA [GCGGCGGCG] > A… AAAAAAAAA [GCGGCGGCG] > AAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala24_Al… NP_001293139.1:p.Ala24_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAA (AlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[7] |
AAAAAAAAA [GCGGCG] > AAAA… AAAAAAAAA [GCGGCG] > AAAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala25_Al… NP_001293139.1:p.Ala25_Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAA (AlaAlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[8] |
AAAAAAAAA [GCG] > AAAAAAA… AAAAAAAAA [GCG] > AAAAAAAA [] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor | NP_001293139.1:p.Ala26del |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Deletion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[10] |
AAAAAAAAA [CTG] > AAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAA [GCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor | NP_001293139.1:p.Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[11] |
AAAAAAAAA [CTG] > AAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAA [GCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala25_Al… NP_001293139.1:p.Ala25_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[12] |
AAAAAAAAA [CTG] > AAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAA [GCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala24_Al… NP_001293139.1:p.Ala24_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[13] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAA [GCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala23_Al… NP_001293139.1:p.Ala23_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[14] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [GCGGCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala22_Al… NP_001293139.1:p.Ala22_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant 3 | NM_001306210.2:c.52GCG[15] |
AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [... AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [GCGGCGGCGGCGGCGGCGCTG] |
Coding Sequence Variant |
TGF-beta receptor type-1 isoform 3 precursor |
NP_001293139.1:p.Ala21_Al… NP_001293139.1:p.Ala21_Ala26dup |
AAAAAAAAA (AlaAlaAlaAlaAl… AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla) |
Inframe Insertion |
TGFBR1 transcript variant X2 |
XM_011518949.3:c.-111+115… XM_011518949.3:c.-111+1150GGC[3] |
N/A | Intron Variant |
TGFBR1 transcript variant X1 | XM_011518948.3:c. | N/A | Genic Upstream Transcript Variant |
Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV001926829.3 | Familial thoracic aortic aneurysm and aortic dissection | Uncertain-Significance |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000588865.4 | not provided | Conflicting-Interpretations-Of-Pathogenicity |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV001069917.4 | Familial thoracic aortic aneurysm and aortic dissection | Uncertain-Significance |
RCV001719118.3 | not provided | Likely-Benign |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000152000.19 | not specified | Benign |
RCV000203000.6 | Loeys-Dietz syndrome | Benign-Likely-Benign |
RCV000206714.15 | Familial thoracic aortic aneurysm and aortic dissection | Benign |
RCV000263723.5 | Loeys-Dietz syndrome 1 | Benign |
RCV000617041.2 | Cardiovascular phenotype | Benign |
RCV000755402.10 | not provided | Benign |
RCV002277299.1 | Ehlers-Danlos syndrome | Benign |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000246749.2 | Cardiovascular phenotype | Benign |
RCV000865938.8 | Familial thoracic aortic aneurysm and aortic dissection | Benign |
RCV001705391.2 | not provided | Likely-Benign |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000199722.11 | not specified | Likely-Benign |
RCV000246233.11 | Familial thoracic aortic aneurysm and aortic dissection | Benign-Likely-Benign |
RCV001722085.5 | not provided | Benign |
RCV002277547.1 | Ehlers-Danlos syndrome | Likely-Benign |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000195794.11 | not specified | Conflicting-Interpretations-Of-Pathogenicity |
RCV000526310.12 | Familial thoracic aortic aneurysm and aortic dissection | Likely-Benign |
RCV001579589.5 | not provided | Likely-Benign |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000590468.5 | not provided | Conflicting-Interpretations-Of-Pathogenicity |
RCV000704697.5 | Familial thoracic aortic aneurysm and aortic dissection | Uncertain-Significance |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000465262.6 | Familial thoracic aortic aneurysm and aortic dissection | Uncertain-Significance |
RCV001704558.5 | not provided | Conflicting-Interpretations-Of-Pathogenicity |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000654792.4 | Familial thoracic aortic aneurysm and aortic dissection | Uncertain-Significance |
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV001326875.4 | Familial thoracic aortic aneurysm and aortic dissection | Uncertain-Significance |
Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".
Placement | (GGC)9G= | del(GCG)6 | del(GCG)5 | del(GCG)4 | del(GCG)3 | del(GCG)2 | delGCG | dupGCG | dup(GCG)2 | dup(GCG)3 | dup(GCG)4 | dup(GCG)5 | dup(GCG)6 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GRCh38.p14 chr 9 | NC_000009.12:g.99105256_99105283= | NC_000009.12:g.99105257GCG[3] | NC_000009.12:g.99105257GCG[4] | NC_000009.12:g.99105257GCG[5] | NC_000009.12:g.99105257GCG[6] | NC_000009.12:g.99105257GCG[7] | NC_000009.12:g.99105257GCG[8] | NC_000009.12:g.99105257GCG[10] | NC_000009.12:g.99105257GCG[11] | NC_000009.12:g.99105257GCG[12] | NC_000009.12:g.99105257GCG[13] | NC_000009.12:g.99105257GCG[14] | NC_000009.12:g.99105257GCG[15] |
GRCh37.p13 chr 9 | NC_000009.11:g.101867538_101867565= | NC_000009.11:g.101867539GCG[3] | NC_000009.11:g.101867539GCG[4] | NC_000009.11:g.101867539GCG[5] | NC_000009.11:g.101867539GCG[6] | NC_000009.11:g.101867539GCG[7] | NC_000009.11:g.101867539GCG[8] | NC_000009.11:g.101867539GCG[10] | NC_000009.11:g.101867539GCG[11] | NC_000009.11:g.101867539GCG[12] | NC_000009.11:g.101867539GCG[13] | NC_000009.11:g.101867539GCG[14] | NC_000009.11:g.101867539GCG[15] |
TGFBR1 RefSeqGene | NG_007461.1:g.5127_5154= | NG_007461.1:g.5128GCG[3] | NG_007461.1:g.5128GCG[4] | NG_007461.1:g.5128GCG[5] | NG_007461.1:g.5128GCG[6] | NG_007461.1:g.5128GCG[7] | NG_007461.1:g.5128GCG[8] | NG_007461.1:g.5128GCG[10] | NG_007461.1:g.5128GCG[11] | NG_007461.1:g.5128GCG[12] | NG_007461.1:g.5128GCG[13] | NG_007461.1:g.5128GCG[14] | NG_007461.1:g.5128GCG[15] |
TGFBR1 transcript variant 1 | NM_004612.4:c.51_78= | NM_004612.4:c.52GCG[3] | NM_004612.4:c.52GCG[4] | NM_004612.4:c.52GCG[5] | NM_004612.4:c.52GCG[6] | NM_004612.4:c.52GCG[7] | NM_004612.4:c.52GCG[8] | NM_004612.4:c.52GCG[10] | NM_004612.4:c.52GCG[11] | NM_004612.4:c.52GCG[12] | NM_004612.4:c.52GCG[13] | NM_004612.4:c.52GCG[14] | NM_004612.4:c.52GCG[15] |
TGFBR1 transcript variant 1 | NM_004612.3:c.51_78= | NM_004612.3:c.52GCG[3] | NM_004612.3:c.52GCG[4] | NM_004612.3:c.52GCG[5] | NM_004612.3:c.52GCG[6] | NM_004612.3:c.52GCG[7] | NM_004612.3:c.52GCG[8] | NM_004612.3:c.52GCG[10] | NM_004612.3:c.52GCG[11] | NM_004612.3:c.52GCG[12] | NM_004612.3:c.52GCG[13] | NM_004612.3:c.52GCG[14] | NM_004612.3:c.52GCG[15] |
TGFBR1 transcript variant 1 | NM_004612.2:c.51_78= | NM_004612.2:c.52GCG[3] | NM_004612.2:c.52GCG[4] | NM_004612.2:c.52GCG[5] | NM_004612.2:c.52GCG[6] | NM_004612.2:c.52GCG[7] | NM_004612.2:c.52GCG[8] | NM_004612.2:c.52GCG[10] | NM_004612.2:c.52GCG[11] | NM_004612.2:c.52GCG[12] | NM_004612.2:c.52GCG[13] | NM_004612.2:c.52GCG[14] | NM_004612.2:c.52GCG[15] |
TGFBR1 transcript variant 2 | NM_001130916.3:c.51_78= | NM_001130916.3:c.52GCG[3] | NM_001130916.3:c.52GCG[4] | NM_001130916.3:c.52GCG[5] | NM_001130916.3:c.52GCG[6] | NM_001130916.3:c.52GCG[7] | NM_001130916.3:c.52GCG[8] | NM_001130916.3:c.52GCG[10] | NM_001130916.3:c.52GCG[11] | NM_001130916.3:c.52GCG[12] | NM_001130916.3:c.52GCG[13] | NM_001130916.3:c.52GCG[14] | NM_001130916.3:c.52GCG[15] |
TGFBR1 transcript variant 2 | NM_001130916.2:c.51_78= | NM_001130916.2:c.52GCG[3] | NM_001130916.2:c.52GCG[4] | NM_001130916.2:c.52GCG[5] | NM_001130916.2:c.52GCG[6] | NM_001130916.2:c.52GCG[7] | NM_001130916.2:c.52GCG[8] | NM_001130916.2:c.52GCG[10] | NM_001130916.2:c.52GCG[11] | NM_001130916.2:c.52GCG[12] | NM_001130916.2:c.52GCG[13] | NM_001130916.2:c.52GCG[14] | NM_001130916.2:c.52GCG[15] |
TGFBR1 transcript variant 2 | NM_001130916.1:c.51_78= | NM_001130916.1:c.52GCG[3] | NM_001130916.1:c.52GCG[4] | NM_001130916.1:c.52GCG[5] | NM_001130916.1:c.52GCG[6] | NM_001130916.1:c.52GCG[7] | NM_001130916.1:c.52GCG[8] | NM_001130916.1:c.52GCG[10] | NM_001130916.1:c.52GCG[11] | NM_001130916.1:c.52GCG[12] | NM_001130916.1:c.52GCG[13] | NM_001130916.1:c.52GCG[14] | NM_001130916.1:c.52GCG[15] |
TGFBR1 transcript variant 3 | NM_001306210.2:c.51_78= | NM_001306210.2:c.52GCG[3] | NM_001306210.2:c.52GCG[4] | NM_001306210.2:c.52GCG[5] | NM_001306210.2:c.52GCG[6] | NM_001306210.2:c.52GCG[7] | NM_001306210.2:c.52GCG[8] | NM_001306210.2:c.52GCG[10] | NM_001306210.2:c.52GCG[11] | NM_001306210.2:c.52GCG[12] | NM_001306210.2:c.52GCG[13] | NM_001306210.2:c.52GCG[14] | NM_001306210.2:c.52GCG[15] |
TGFBR1 transcript variant 3 | NM_001306210.1:c.51_78= | NM_001306210.1:c.52GCG[3] | NM_001306210.1:c.52GCG[4] | NM_001306210.1:c.52GCG[5] | NM_001306210.1:c.52GCG[6] | NM_001306210.1:c.52GCG[7] | NM_001306210.1:c.52GCG[8] | NM_001306210.1:c.52GCG[10] | NM_001306210.1:c.52GCG[11] | NM_001306210.1:c.52GCG[12] | NM_001306210.1:c.52GCG[13] | NM_001306210.1:c.52GCG[14] | NM_001306210.1:c.52GCG[15] |
TGFBR1 transcript variant 8 | NM_001407420.1:c.-293_-266= | NM_001407420.1:c.-292GCG[3] | NM_001407420.1:c.-292GCG[4] | NM_001407420.1:c.-292GCG[5] | NM_001407420.1:c.-292GCG[6] | NM_001407420.1:c.-292GCG[7] | NM_001407420.1:c.-292GCG[8] | NM_001407420.1:c.-292GCG[10] | NM_001407420.1:c.-292GCG[11] | NM_001407420.1:c.-292GCG[12] | NM_001407420.1:c.-292GCG[13] | NM_001407420.1:c.-292GCG[14] | NM_001407420.1:c.-292GCG[15] |
TGFBR1 transcript variant 16 | NM_001407429.1:c.-293_-266= | NM_001407429.1:c.-292GCG[3] | NM_001407429.1:c.-292GCG[4] | NM_001407429.1:c.-292GCG[5] | NM_001407429.1:c.-292GCG[6] | NM_001407429.1:c.-292GCG[7] | NM_001407429.1:c.-292GCG[8] | NM_001407429.1:c.-292GCG[10] | NM_001407429.1:c.-292GCG[11] | NM_001407429.1:c.-292GCG[12] | NM_001407429.1:c.-292GCG[13] | NM_001407429.1:c.-292GCG[14] | NM_001407429.1:c.-292GCG[15] |
TGFBR1 transcript variant 9 | NM_001407422.1:c.-262_-235= | NM_001407422.1:c.-261GCG[3] | NM_001407422.1:c.-261GCG[4] | NM_001407422.1:c.-261GCG[5] | NM_001407422.1:c.-261GCG[6] | NM_001407422.1:c.-261GCG[7] | NM_001407422.1:c.-261GCG[8] | NM_001407422.1:c.-261GCG[10] | NM_001407422.1:c.-261GCG[11] | NM_001407422.1:c.-261GCG[12] | NM_001407422.1:c.-261GCG[13] | NM_001407422.1:c.-261GCG[14] | NM_001407422.1:c.-261GCG[15] |
TGFBR1 transcript variant 26 | NR_176361.1:n.144_171= | NR_176361.1:n.145GCG[3] | NR_176361.1:n.145GCG[4] | NR_176361.1:n.145GCG[5] | NR_176361.1:n.145GCG[6] | NR_176361.1:n.145GCG[7] | NR_176361.1:n.145GCG[8] | NR_176361.1:n.145GCG[10] | NR_176361.1:n.145GCG[11] | NR_176361.1:n.145GCG[12] | NR_176361.1:n.145GCG[13] | NR_176361.1:n.145GCG[14] | NR_176361.1:n.145GCG[15] |
TGFBR1 transcript variant 13 | NM_001407426.1:c.-262_-235= | NM_001407426.1:c.-261GCG[3] | NM_001407426.1:c.-261GCG[4] | NM_001407426.1:c.-261GCG[5] | NM_001407426.1:c.-261GCG[6] | NM_001407426.1:c.-261GCG[7] | NM_001407426.1:c.-261GCG[8] | NM_001407426.1:c.-261GCG[10] | NM_001407426.1:c.-261GCG[11] | NM_001407426.1:c.-261GCG[12] | NM_001407426.1:c.-261GCG[13] | NM_001407426.1:c.-261GCG[14] | NM_001407426.1:c.-261GCG[15] |
TGFBR1 transcript variant 15 | NM_001407428.1:c.-217_-190= | NM_001407428.1:c.-216GCG[3] | NM_001407428.1:c.-216GCG[4] | NM_001407428.1:c.-216GCG[5] | NM_001407428.1:c.-216GCG[6] | NM_001407428.1:c.-216GCG[7] | NM_001407428.1:c.-216GCG[8] | NM_001407428.1:c.-216GCG[10] | NM_001407428.1:c.-216GCG[11] | NM_001407428.1:c.-216GCG[12] | NM_001407428.1:c.-216GCG[13] | NM_001407428.1:c.-216GCG[14] | NM_001407428.1:c.-216GCG[15] |
TGFBR1 transcript variant 25 | NR_176360.1:n.144_171= | NR_176360.1:n.145GCG[3] | NR_176360.1:n.145GCG[4] | NR_176360.1:n.145GCG[5] | NR_176360.1:n.145GCG[6] | NR_176360.1:n.145GCG[7] | NR_176360.1:n.145GCG[8] | NR_176360.1:n.145GCG[10] | NR_176360.1:n.145GCG[11] | NR_176360.1:n.145GCG[12] | NR_176360.1:n.145GCG[13] | NR_176360.1:n.145GCG[14] | NR_176360.1:n.145GCG[15] |
TGFBR1 transcript variant 27 | NR_176362.1:n.144_171= | NR_176362.1:n.145GCG[3] | NR_176362.1:n.145GCG[4] | NR_176362.1:n.145GCG[5] | NR_176362.1:n.145GCG[6] | NR_176362.1:n.145GCG[7] | NR_176362.1:n.145GCG[8] | NR_176362.1:n.145GCG[10] | NR_176362.1:n.145GCG[11] | NR_176362.1:n.145GCG[12] | NR_176362.1:n.145GCG[13] | NR_176362.1:n.145GCG[14] | NR_176362.1:n.145GCG[15] |
TGFBR1 transcript variant 28 | NR_176363.1:n.144_171= | NR_176363.1:n.145GCG[3] | NR_176363.1:n.145GCG[4] | NR_176363.1:n.145GCG[5] | NR_176363.1:n.145GCG[6] | NR_176363.1:n.145GCG[7] | NR_176363.1:n.145GCG[8] | NR_176363.1:n.145GCG[10] | NR_176363.1:n.145GCG[11] | NR_176363.1:n.145GCG[12] | NR_176363.1:n.145GCG[13] | NR_176363.1:n.145GCG[14] | NR_176363.1:n.145GCG[15] |
TGFBR1 transcript variant 4 | NM_001407416.1:c.51_78= | NM_001407416.1:c.52GCG[3] | NM_001407416.1:c.52GCG[4] | NM_001407416.1:c.52GCG[5] | NM_001407416.1:c.52GCG[6] | NM_001407416.1:c.52GCG[7] | NM_001407416.1:c.52GCG[8] | NM_001407416.1:c.52GCG[10] | NM_001407416.1:c.52GCG[11] | NM_001407416.1:c.52GCG[12] | NM_001407416.1:c.52GCG[13] | NM_001407416.1:c.52GCG[14] | NM_001407416.1:c.52GCG[15] |
TGFBR1 transcript variant 5 | NM_001407417.1:c.51_78= | NM_001407417.1:c.52GCG[3] | NM_001407417.1:c.52GCG[4] | NM_001407417.1:c.52GCG[5] | NM_001407417.1:c.52GCG[6] | NM_001407417.1:c.52GCG[7] | NM_001407417.1:c.52GCG[8] | NM_001407417.1:c.52GCG[10] | NM_001407417.1:c.52GCG[11] | NM_001407417.1:c.52GCG[12] | NM_001407417.1:c.52GCG[13] | NM_001407417.1:c.52GCG[14] | NM_001407417.1:c.52GCG[15] |
TGFBR1 transcript variant 21 | NM_001407435.1:c.51_78= | NM_001407435.1:c.52GCG[3] | NM_001407435.1:c.52GCG[4] | NM_001407435.1:c.52GCG[5] | NM_001407435.1:c.52GCG[6] | NM_001407435.1:c.52GCG[7] | NM_001407435.1:c.52GCG[8] | NM_001407435.1:c.52GCG[10] | NM_001407435.1:c.52GCG[11] | NM_001407435.1:c.52GCG[12] | NM_001407435.1:c.52GCG[13] | NM_001407435.1:c.52GCG[14] | NM_001407435.1:c.52GCG[15] |
TGFBR1 transcript variant 22 | NM_001407436.1:c.51_78= | NM_001407436.1:c.52GCG[3] | NM_001407436.1:c.52GCG[4] | NM_001407436.1:c.52GCG[5] | NM_001407436.1:c.52GCG[6] | NM_001407436.1:c.52GCG[7] | NM_001407436.1:c.52GCG[8] | NM_001407436.1:c.52GCG[10] | NM_001407436.1:c.52GCG[11] | NM_001407436.1:c.52GCG[12] | NM_001407436.1:c.52GCG[13] | NM_001407436.1:c.52GCG[14] | NM_001407436.1:c.52GCG[15] |
TGFBR1 transcript variant 23 | NM_001407438.1:c.51_78= | NM_001407438.1:c.52GCG[3] | NM_001407438.1:c.52GCG[4] | NM_001407438.1:c.52GCG[5] | NM_001407438.1:c.52GCG[6] | NM_001407438.1:c.52GCG[7] | NM_001407438.1:c.52GCG[8] | NM_001407438.1:c.52GCG[10] | NM_001407438.1:c.52GCG[11] | NM_001407438.1:c.52GCG[12] | NM_001407438.1:c.52GCG[13] | NM_001407438.1:c.52GCG[14] | NM_001407438.1:c.52GCG[15] |
TGFBR1 transcript variant 24 | NM_001407437.1:c.51_78= | NM_001407437.1:c.52GCG[3] | NM_001407437.1:c.52GCG[4] | NM_001407437.1:c.52GCG[5] | NM_001407437.1:c.52GCG[6] | NM_001407437.1:c.52GCG[7] | NM_001407437.1:c.52GCG[8] | NM_001407437.1:c.52GCG[10] | NM_001407437.1:c.52GCG[11] | NM_001407437.1:c.52GCG[12] | NM_001407437.1:c.52GCG[13] | NM_001407437.1:c.52GCG[14] | NM_001407437.1:c.52GCG[15] |
TGF-beta receptor type-1 isoform 1 precursor | NP_004603.1:p.Leu17_Ala26= | NP_004603.1:p.Ala21_Ala26del | NP_004603.1:p.Ala22_Ala26del | NP_004603.1:p.Ala23_Ala26del | NP_004603.1:p.Ala24_Ala26del | NP_004603.1:p.Ala25_Ala26del | NP_004603.1:p.Ala26del | NP_004603.1:p.Ala26dup | NP_004603.1:p.Ala25_Ala26dup | NP_004603.1:p.Ala24_Ala26dup | NP_004603.1:p.Ala23_Ala26dup | NP_004603.1:p.Ala22_Ala26dup | NP_004603.1:p.Ala21_Ala26dup |
TGF-beta receptor type-1 isoform 2 precursor | NP_001124388.1:p.Leu17_Ala26= | NP_001124388.1:p.Ala21_Ala26del | NP_001124388.1:p.Ala22_Ala26del | NP_001124388.1:p.Ala23_Ala26del | NP_001124388.1:p.Ala24_Ala26del | NP_001124388.1:p.Ala25_Ala26del | NP_001124388.1:p.Ala26del | NP_001124388.1:p.Ala26dup | NP_001124388.1:p.Ala25_Ala26dup | NP_001124388.1:p.Ala24_Ala26dup | NP_001124388.1:p.Ala23_Ala26dup | NP_001124388.1:p.Ala22_Ala26dup | NP_001124388.1:p.Ala21_Ala26dup |
TGF-beta receptor type-1 isoform 3 precursor | NP_001293139.1:p.Leu17_Ala26= | NP_001293139.1:p.Ala21_Ala26del | NP_001293139.1:p.Ala22_Ala26del | NP_001293139.1:p.Ala23_Ala26del | NP_001293139.1:p.Ala24_Ala26del | NP_001293139.1:p.Ala25_Ala26del | NP_001293139.1:p.Ala26del | NP_001293139.1:p.Ala26dup | NP_001293139.1:p.Ala25_Ala26dup | NP_001293139.1:p.Ala24_Ala26dup | NP_001293139.1:p.Ala23_Ala26dup | NP_001293139.1:p.Ala22_Ala26dup | NP_001293139.1:p.Ala21_Ala26dup |
TGFBR1 transcript variant X2 | XM_011518949.3:c.-111+1150= | XM_011518949.3:c.-111+1150GGC[3] | XM_011518949.3:c.-111+1150GGC[4] | XM_011518949.3:c.-111+1150GGC[5] | XM_011518949.3:c.-111+1150GGC[6] | XM_011518949.3:c.-111+1150GGC[7] | XM_011518949.3:c.-111+1150GGC[8] | XM_011518949.3:c.-111+1150GGC[10] | XM_011518949.3:c.-111+1150GGC[11] | XM_011518949.3:c.-111+1150GGC[12] | XM_011518949.3:c.-111+1150GGC[13] | XM_011518949.3:c.-111+1150GGC[14] | XM_011518949.3:c.-111+1150GGC[15] |
Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.
No | Submitter | Submission ID | Date (Build) |
---|---|---|---|
1 | IIPGA-WEISS-MARTINEZ | ss15356789 | Feb 28, 2004 (120) |
2 | 1000GENOMES | ss1368539259 | Aug 21, 2014 (136) |
3 | 1000GENOMES | ss1368539263 | Aug 21, 2014 (136) |
4 | EVA_EXAC | ss1711915638 | Apr 01, 2015 (136) |
5 | EVA_EXAC | ss1711915639 | Oct 12, 2018 (152) |
6 | CLINVAR | ss1960973297 | Dec 03, 2015 (146) |
7 | CLINVAR | ss1960973298 | Oct 12, 2018 (152) |
8 | CLINVAR | ss2136310601 | Nov 14, 2016 (149) |
9 | CLINVAR | ss2137513621 | Oct 12, 2018 (152) |
10 | SWEGEN | ss3005308431 | Nov 08, 2017 (151) |
11 | KOEX | ss3029675620 | Nov 08, 2017 (151) |
12 | EVA_DECODE | ss3724409125 | Jul 13, 2019 (153) |
13 | EVA_DECODE | ss3724409126 | Jul 13, 2019 (153) |
14 | EVA_DECODE | ss3724409127 | Jul 13, 2019 (153) |
15 | EVA_DECODE | ss3724409128 | Jul 13, 2019 (153) |
16 | ACPOP | ss3736722025 | Jul 13, 2019 (153) |
17 | ACPOP | ss3736722026 | Jul 13, 2019 (153) |
18 | KHV_HUMAN_GENOMES | ss3812640040 | Jul 13, 2019 (153) |
19 | KOGIC | ss3966403909 | Apr 26, 2020 (154) |
20 | KOGIC | ss3966403910 | Apr 26, 2020 (154) |
21 | KOGIC | ss3966403911 | Apr 26, 2020 (154) |
22 | KOGIC | ss3966403912 | Apr 26, 2020 (154) |
23 | GNOMAD | ss4206439888 | Apr 26, 2021 (155) |
24 | GNOMAD | ss4206439889 | Apr 26, 2021 (155) |
25 | GNOMAD | ss4206439890 | Apr 26, 2021 (155) |
26 | GNOMAD | ss4206439891 | Apr 26, 2021 (155) |
27 | GNOMAD | ss4206439892 | Apr 26, 2021 (155) |
28 | GNOMAD | ss4206439893 | Apr 26, 2021 (155) |
29 | GNOMAD | ss4206439894 | Apr 26, 2021 (155) |
30 | GNOMAD | ss4206439895 | Apr 26, 2021 (155) |
31 | GNOMAD | ss4206439896 | Apr 26, 2021 (155) |
32 | GNOMAD | ss4206439897 | Apr 26, 2021 (155) |
33 | GNOMAD | ss4206439898 | Apr 26, 2021 (155) |
34 | TOPMED | ss4829531691 | Apr 26, 2021 (155) |
35 | TOPMED | ss4829531692 | Apr 26, 2021 (155) |
36 | EVA | ss5141947439 | Apr 26, 2021 (155) |
37 | TOMMO_GENOMICS | ss5194514242 | Apr 26, 2021 (155) |
38 | TOMMO_GENOMICS | ss5194514243 | Apr 26, 2021 (155) |
39 | TOMMO_GENOMICS | ss5194514244 | Apr 26, 2021 (155) |
40 | TOMMO_GENOMICS | ss5194514245 | Apr 26, 2021 (155) |
41 | TOMMO_GENOMICS | ss5194514246 | Apr 26, 2021 (155) |
42 | TOMMO_GENOMICS | ss5194514247 | Apr 26, 2021 (155) |
43 | 1000G_HIGH_COVERAGE | ss5281572623 | Oct 13, 2022 (156) |
44 | 1000G_HIGH_COVERAGE | ss5281572624 | Oct 13, 2022 (156) |
45 | 1000G_HIGH_COVERAGE | ss5281572625 | Oct 13, 2022 (156) |
46 | 1000G_HIGH_COVERAGE | ss5281572626 | Oct 13, 2022 (156) |
47 | 1000G_HIGH_COVERAGE | ss5281572627 | Oct 13, 2022 (156) |
48 | 1000G_HIGH_COVERAGE | ss5281572628 | Oct 13, 2022 (156) |
49 | HUGCELL_USP | ss5477497472 | Oct 13, 2022 (156) |
50 | HUGCELL_USP | ss5477497473 | Oct 13, 2022 (156) |
51 | HUGCELL_USP | ss5477497474 | Oct 13, 2022 (156) |
52 | EVA | ss5624186061 | Oct 13, 2022 (156) |
53 | TOMMO_GENOMICS | ss5738816061 | Oct 13, 2022 (156) |
54 | TOMMO_GENOMICS | ss5738816062 | Oct 13, 2022 (156) |
55 | TOMMO_GENOMICS | ss5738816063 | Oct 13, 2022 (156) |
56 | TOMMO_GENOMICS | ss5738816064 | Oct 13, 2022 (156) |
57 | TOMMO_GENOMICS | ss5738816065 | Oct 13, 2022 (156) |
58 | TOMMO_GENOMICS | ss5738816066 | Oct 13, 2022 (156) |
59 | EVA | ss5829508048 | Oct 13, 2022 (156) |
60 | EVA | ss5829508049 | Oct 13, 2022 (156) |
61 | EVA | ss5848726372 | Oct 13, 2022 (156) |
62 | EVA | ss5848726373 | Oct 13, 2022 (156) |
63 | EVA | ss5935996537 | Oct 13, 2022 (156) |
64 | 1000Genomes | NC_000009.11 - 101867538 | Oct 12, 2018 (152) |
65 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
66 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
67 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
68 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
69 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
70 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
71 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
72 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
73 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
74 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
75 |
gnomAD - Genomes
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
76 |
gnomAD - Exomes
Submission ignored due to conflicting rows: |
- | Jul 13, 2019 (153) |
77 |
gnomAD - Exomes
Submission ignored due to conflicting rows: |
- | Jul 13, 2019 (153) |
78 |
gnomAD - Exomes
Submission ignored due to conflicting rows: |
- | Jul 13, 2019 (153) |
79 |
Korean Genome Project
Submission ignored due to conflicting rows: |
- | Apr 26, 2020 (154) |
80 |
Korean Genome Project
Submission ignored due to conflicting rows: |
- | Apr 26, 2020 (154) |
81 |
Korean Genome Project
Submission ignored due to conflicting rows: |
- | Apr 26, 2020 (154) |
82 |
Korean Genome Project
Submission ignored due to conflicting rows: |
- | Apr 26, 2020 (154) |
83 |
Northern Sweden
Submission ignored due to conflicting rows: |
- | Jul 13, 2019 (153) |
84 |
Northern Sweden
Submission ignored due to conflicting rows: |
- | Jul 13, 2019 (153) |
85 |
8.3KJPN
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
86 |
8.3KJPN
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
87 |
8.3KJPN
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
88 |
8.3KJPN
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
89 |
8.3KJPN
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
90 |
8.3KJPN
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
91 |
14KJPN
Submission ignored due to conflicting rows: |
- | Oct 13, 2022 (156) |
92 |
14KJPN
Submission ignored due to conflicting rows: |
- | Oct 13, 2022 (156) |
93 |
14KJPN
Submission ignored due to conflicting rows: |
- | Oct 13, 2022 (156) |
94 |
14KJPN
Submission ignored due to conflicting rows: |
- | Oct 13, 2022 (156) |
95 |
14KJPN
Submission ignored due to conflicting rows: |
- | Oct 13, 2022 (156) |
96 |
14KJPN
Submission ignored due to conflicting rows: |
- | Oct 13, 2022 (156) |
97 |
TopMed
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
98 |
TopMed
Submission ignored due to conflicting rows: |
- | Apr 26, 2021 (155) |
99 | ALFA | NC_000009.12 - 99105256 | Apr 26, 2021 (155) |
100 | ClinVar | RCV000152000.19 | Oct 13, 2022 (156) |
101 | ClinVar | RCV000195794.11 | Oct 13, 2022 (156) |
102 | ClinVar | RCV000199722.11 | Oct 13, 2022 (156) |
103 | ClinVar | RCV000203000.6 | Oct 13, 2022 (156) |
104 | ClinVar | RCV000206714.15 | Oct 13, 2022 (156) |
105 | ClinVar | RCV000246233.11 | Oct 13, 2022 (156) |
106 | ClinVar | RCV000246749.2 | Oct 13, 2022 (156) |
107 | ClinVar | RCV000263723.5 | Oct 13, 2022 (156) |
108 | ClinVar | RCV000465262.6 | Oct 13, 2022 (156) |
109 | ClinVar | RCV000526310.12 | Oct 13, 2022 (156) |
110 | ClinVar | RCV000588865.4 | Oct 13, 2022 (156) |
111 | ClinVar | RCV000590468.5 | Oct 13, 2022 (156) |
112 | ClinVar | RCV000617041.2 | Oct 13, 2022 (156) |
113 | ClinVar | RCV000654792.4 | Oct 13, 2022 (156) |
114 | ClinVar | RCV000704697.5 | Apr 26, 2021 (155) |
115 | ClinVar | RCV000755402.10 | Oct 13, 2022 (156) |
116 | ClinVar | RCV000865938.8 | Oct 13, 2022 (156) |
117 | ClinVar | RCV001069917.4 | Oct 13, 2022 (156) |
118 | ClinVar | RCV001326875.4 | Oct 13, 2022 (156) |
119 | ClinVar | RCV001579589.5 | Oct 13, 2022 (156) |
120 | ClinVar | RCV001704558.5 | Oct 13, 2022 (156) |
121 | ClinVar | RCV001705391.2 | Oct 13, 2022 (156) |
122 | ClinVar | RCV001719118.3 | Oct 13, 2022 (156) |
123 | ClinVar | RCV001722085.5 | Oct 13, 2022 (156) |
124 | ClinVar | RCV001926829.3 | Oct 13, 2022 (156) |
125 | ClinVar | RCV002277299.1 | Oct 13, 2022 (156) |
126 | ClinVar | RCV002277547.1 | Oct 13, 2022 (156) |
History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).
Associated ID | History Updated (Build) |
---|---|
rs554578321 | Feb 27, 2017 (136) |
rs538831129 | May 11, 2017 (136) |
Submission IDs | Observation SPDI | Canonical SPDI | Source RSIDs |
---|---|---|---|
ss4206439898, ss4829531692, ss5738816065 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCG |
(self) |
RCV001926829.3, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCG |
(self) |
ss4206439897 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCG |
(self) |
RCV000588865.4, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCG |
(self) |
ss3029675620, ss5194514245 |
NC_000009.11:101867537:GGCGGCGGCGG…
NC_000009.11:101867537:GGCGGCGGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCG |
(self) |
ss3724409128, ss3966403911, ss4206439896, ss5281572628, ss5738816064 | NC_000009.12:99105255:GGCGGCGGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCG |
(self) |
RCV001069917.4, RCV001719118.3, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCG |
(self) |
47053646, ss1368539259, ss1711915638, ss3005308431, ss3736722025, ss5194514244, ss5624186061, ss5829508048 | NC_000009.11:101867537:GGCGGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG |
(self) |
ss5848726372 | NC_000009.11:101867556:GCGGCGGCG: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG |
|
ss4206439895, ss4829531691, ss5281572624, ss5477497472, ss5738816063 | NC_000009.12:99105255:GGCGGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG |
(self) |
RCV000152000.19, RCV000203000.6, RCV000206714.15, RCV000263723.5, RCV000617041.2, RCV000755402.10, RCV002277299.1, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG |
(self) |
ss3724409127, ss3966403910 | NC_000009.12:99105258:GGCGGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG |
(self) |
ss15356789 | NT_008470.19:31032087:GGCGGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG |
(self) |
ss5194514247 | NC_000009.11:101867537:GGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss4206439894 | NC_000009.12:99105255:GGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG |
(self) |
RCV000246749.2, RCV000865938.8, RCV001705391.2, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss3724409126 | NC_000009.12:99105261:GGCGGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss2136310601 | NC_000009.12:99105277:GCGGCG: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss5829508049, ss5935996537 | NC_000009.11:101867537:GGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss1368539263 | NC_000009.11:101867543:GGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss5848726373 | NC_000009.11:101867562:GCG: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG |
|
ss4206439893, ss5141947439, ss5281572623, ss5477497473 | NC_000009.12:99105255:GGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
RCV000199722.11, RCV000246233.11, RCV001722085.5, RCV002277547.1, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss3724409125, ss3966403912 | NC_000009.12:99105264:GGC: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss1960973297 | NC_000009.12:99105280:GCG: |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss1711915639, ss5194514242 | NC_000009.11:101867537::GGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss3812640040, ss4206439888, ss5281572626, ss5477497474, ss5738816062 | NC_000009.12:99105255::GGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
RCV000195794.11, RCV000526310.12, RCV001579589.5, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss3966403909 | NC_000009.12:99105267::GGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss1960973298 | NC_000009.12:99105283::GCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss3736722026, ss5194514243 | NC_000009.11:101867537::GGCGGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss4206439889, ss5281572627, ss5738816061 | NC_000009.12:99105255::GGCGGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
RCV000590468.5, RCV000704697.5, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss5194514246 | NC_000009.11:101867537::GGCGGCGGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss4206439890, ss5738816066 | NC_000009.12:99105255::GGCGGCGGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
RCV000465262.6, RCV001704558.5, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss2137513621 | NC_000009.12:99105283::GCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
RCV000654792.4, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss4206439891, ss5281572625 |
NC_000009.12:99105255::GGCGGCGGCGG…
NC_000009.12:99105255::GGCGGCGGCGGCGGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
RCV001326875.4, 6138317673 |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
ss4206439892 |
NC_000009.12:99105255::GGCGGCGGCGG…
NC_000009.12:99105255::GGCGGCGGCGGCGGCGGC |
NC_000009.12:99105255:GGCGGCGGCGGC…
NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG |
(self) |
Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.
PMID | Title | Author | Year | Journal |
---|---|---|---|---|
12947057 | TGFBR1*6A and cancer risk: a meta-analysis of seven case-control studies. | Kaklamani VG et al. | 2003 | Journal of clinical oncology |
14966109 | TGFBR1*6A and cancer: a meta-analysis of 12 case-control studies. | Pasche B et al. | 2004 | Journal of clinical oncology |
15860866 | TGFBR1*6A may contribute to hereditary colorectal cancer. | Bian Y et al. | 2005 | Journal of clinical oncology |
17575241 | Lack of an association between the TGFBR1*6A variant and colorectal cancer risk. | Skoglund J et al. | 2007 | Clinical cancer research |
17848956 | TGFBR1(*)6A and Int7G24A variants of transforming growth factor-beta receptor 1 in Swedish familial and sporadic breast cancer. | Song B et al. | 2007 | British journal of cancer |
19004027 | TGFB1 and TGFBR1 polymorphic variants in relationship to bladder cancer risk and prognosis. | Castillejo A et al. | 2009 | International journal of cancer |
19538729 | The TGFBR1*6A allele is not associated with susceptibility to colorectal cancer in a Spanish population: a case-control study. | Castillejo A et al. | 2009 | BMC cancer |
20368424 | Comprehensive assessment of variation at the transforming growth factor beta type 1 receptor locus and colorectal cancer predisposition. | Carvajal-Carmona LG et al. | 2010 | Proceedings of the National Academy of Sciences of the United States of America |
21515830 | Genetic variations in the transforming growth factor-beta pathway as predictors of survival in advanced non-small cell lung cancer. | Lin M et al. | 2011 | Carcinogenesis |
21811255 | A two-phase case-control study for colorectal cancer genetic susceptibility: candidate genes from chromosomal regions 9q22 and 3q22. | Abulí A et al. | 2011 | British journal of cancer |
22292045 | TGFBR1 intralocus epistatic interaction as a risk factor for colorectal cancer. | Martinez-Canto A et al. | 2012 | PloS one |
22347533 | Debate about TGFBR1 and the susceptibility to colorectal cancer. | Valle L et al. | 2012 | World journal of gastrointestinal oncology |
22539603 | Pathway analyses identify TGFBR2 as potential breast cancer susceptibility gene: results from a consortium study among Asians. | Ma X et al. | 2012 | Cancer epidemiology, biomarkers & prevention |
23251617 | Genetic variations in the transforming growth factor beta pathway as predictors of bladder cancer risk. | Wei H et al. | 2012 | PloS one |
23946381 | Genetic variants associated with colorectal cancer risk: comprehensive research synopsis, meta-analysis, and epidemiological evidence. | Ma X et al. | 2014 | Gut |
24033266 | A systematic approach to assessing the clinical significance of genetic variants. | Duzkale H et al. | 2013 | Clinical genetics |
24465802 | Biomarkers of TGF-β signaling pathway and prognosis of pancreatic cancer. | Javle M et al. | 2014 | PloS one |
24981199 | Little evidence for association between the TGFBR1*6A variant and colorectal cancer: a family-based association study on non-syndromic family members from Australia and Spain. | Ross JP et al. | 2014 | BMC cancer |
25741868 | Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. | Richards S et al. | 2015 | Genetics in medicine |
31435875 | Inherited alterations of TGF beta signaling components in Appalachian cervical cancers. | Knobloch TJ et al. | 2019 | Cancer causes & control |
The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.
Genomic regions, transcripts, and products
Top▲
Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.