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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11466445

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr9:99105256-99105283 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
del(GCG)6 / del(GCG)5 / del(GCG)4

del(GCG)6 / del(GCG)5 / del(GCG)4 / del(GCG)3 / del(GCG)2 / delGCG / dupGCG / dup(GCG)2 / dup(GCG)3 / dup(GCG)4 / dup(GCG)5 / dup(GCG)6

Variation Type
Indel Insertion and Deletion
Frequency
del(GCG)3=0.03428 (561/16364, ALFA)
del(GCG)3=0.0513 (256/4988, 1000G)
Clinical Significance
Reported in ClinVar
Gene : Consequence
TGFBR1 : Inframe Deletion
Publications
20 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 16364 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.96566 GGCGGCGGCG=0.00000, GGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCG=0.03428, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00006, GGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000 0.935949 0.004523 0.059528 32
European Sub 12644 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.95626 GGCGGCGGCG=0.00000, GGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCG=0.04366, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00008, GGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00000 0.918526 0.005854 0.075621 30
African Sub 2442 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.9975 GGCGGCGGCG=0.0000, GGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCG=0.0025, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000 0.995086 0.0 0.004914 0
African Others Sub 98 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.99 GGCGGCGGCG=0.00, GGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCG=0.01, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00 0.979592 0.0 0.020408 0
African American Sub 2344 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.9979 GGCGGCGGCG=0.0000, GGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCG=0.0021, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.0000 0.995734 0.0 0.004266 0
Asian Sub 112 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.000 GGCGGCGGCG=0.000, GGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000 1.0 0.0 0.0 N/A
East Asian Sub 86 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.00 GGCGGCGGCG=0.00, GGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00 1.0 0.0 0.0 N/A
Other Asian Sub 26 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.00 GGCGGCGGCG=0.00, GGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00 1.0 0.0 0.0 N/A
Latin American 1 Sub 112 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.000 GGCGGCGGCG=0.000, GGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000 1.0 0.0 0.0 N/A
Latin American 2 Sub 530 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.000 GGCGGCGGCG=0.000, GGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000 1.0 0.0 0.0 N/A
South Asian Sub 92 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=1.00 GGCGGCGGCG=0.00, GGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.00 1.0 0.0 0.0 N/A
Other Sub 432 GGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.993 GGCGGCGGCG=0.000, GGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCG=0.007, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000, GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG=0.000 0.986111 0.0 0.013889 0


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 16364 (GGC)9G=0.96566 del(GCG)6=0.00000, del(GCG)5=0.00000, del(GCG)4=0.00000, del(GCG)3=0.03428, del(GCG)2=0.00000, delGCG=0.00000, dupGCG=0.00006, dup(GCG)2=0.00000, dup(GCG)3=0.00000, dup(GCG)4=0.00000, dup(GCG)5=0.00000
Allele Frequency Aggregator European Sub 12644 (GGC)9G=0.95626 del(GCG)6=0.00000, del(GCG)5=0.00000, del(GCG)4=0.00000, del(GCG)3=0.04366, del(GCG)2=0.00000, delGCG=0.00000, dupGCG=0.00008, dup(GCG)2=0.00000, dup(GCG)3=0.00000, dup(GCG)4=0.00000, dup(GCG)5=0.00000
Allele Frequency Aggregator African Sub 2442 (GGC)9G=0.9975 del(GCG)6=0.0000, del(GCG)5=0.0000, del(GCG)4=0.0000, del(GCG)3=0.0025, del(GCG)2=0.0000, delGCG=0.0000, dupGCG=0.0000, dup(GCG)2=0.0000, dup(GCG)3=0.0000, dup(GCG)4=0.0000, dup(GCG)5=0.0000
Allele Frequency Aggregator Latin American 2 Sub 530 (GGC)9G=1.000 del(GCG)6=0.000, del(GCG)5=0.000, del(GCG)4=0.000, del(GCG)3=0.000, del(GCG)2=0.000, delGCG=0.000, dupGCG=0.000, dup(GCG)2=0.000, dup(GCG)3=0.000, dup(GCG)4=0.000, dup(GCG)5=0.000
Allele Frequency Aggregator Other Sub 432 (GGC)9G=0.993 del(GCG)6=0.000, del(GCG)5=0.000, del(GCG)4=0.000, del(GCG)3=0.007, del(GCG)2=0.000, delGCG=0.000, dupGCG=0.000, dup(GCG)2=0.000, dup(GCG)3=0.000, dup(GCG)4=0.000, dup(GCG)5=0.000
Allele Frequency Aggregator Latin American 1 Sub 112 (GGC)9G=1.000 del(GCG)6=0.000, del(GCG)5=0.000, del(GCG)4=0.000, del(GCG)3=0.000, del(GCG)2=0.000, delGCG=0.000, dupGCG=0.000, dup(GCG)2=0.000, dup(GCG)3=0.000, dup(GCG)4=0.000, dup(GCG)5=0.000
Allele Frequency Aggregator Asian Sub 112 (GGC)9G=1.000 del(GCG)6=0.000, del(GCG)5=0.000, del(GCG)4=0.000, del(GCG)3=0.000, del(GCG)2=0.000, delGCG=0.000, dupGCG=0.000, dup(GCG)2=0.000, dup(GCG)3=0.000, dup(GCG)4=0.000, dup(GCG)5=0.000
Allele Frequency Aggregator South Asian Sub 92 (GGC)9G=1.00 del(GCG)6=0.00, del(GCG)5=0.00, del(GCG)4=0.00, del(GCG)3=0.00, del(GCG)2=0.00, delGCG=0.00, dupGCG=0.00, dup(GCG)2=0.00, dup(GCG)3=0.00, dup(GCG)4=0.00, dup(GCG)5=0.00
1000Genomes Global Study-wide 4988 (GGC)9G=0.9487 del(GCG)3=0.0513
1000Genomes African Sub 1307 (GGC)9G=0.9449 del(GCG)3=0.0551
1000Genomes East Asian Sub 1008 (GGC)9G=0.9921 del(GCG)3=0.0079
1000Genomes Europe Sub 1005 (GGC)9G=0.9025 del(GCG)3=0.0975
1000Genomes South Asian Sub 975 (GGC)9G=0.962 del(GCG)3=0.038
1000Genomes American Sub 693 (GGC)9G=0.941 del(GCG)3=0.059
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[3]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[4]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[5]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[6]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[7]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[8]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[10]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[11]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[12]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[13]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[14]
GRCh38.p14 chr 9 NC_000009.12:g.99105257GCG[15]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[3]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[4]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[5]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[6]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[7]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[8]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[10]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[11]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[12]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[13]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[14]
GRCh37.p13 chr 9 NC_000009.11:g.101867539GCG[15]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[3]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[4]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[5]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[6]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[7]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[8]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[10]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[11]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[12]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[13]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[14]
TGFBR1 RefSeqGene NG_007461.1:g.5128GCG[15]
Gene: TGFBR1, transforming growth factor beta receptor 1 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[3] AAAAAAAAA [GCGGCGGCGGCGGC…

AAAAAAAAA [GCGGCGGCGGCGGCGGCG] > AAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala21_Ala26…

NP_004603.1:p.Ala21_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAA (AlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[4] AAAAAAAAA [GCGGCGGCGGCGGC…

AAAAAAAAA [GCGGCGGCGGCGGCG] > AAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala22_Ala26…

NP_004603.1:p.Ala22_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAA (AlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[5] AAAAAAAAA [GCGGCGGCGGCG] …

AAAAAAAAA [GCGGCGGCGGCG] > AAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala23_Ala26…

NP_004603.1:p.Ala23_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAA (AlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[6] AAAAAAAAA [GCGGCGGCG] > A…

AAAAAAAAA [GCGGCGGCG] > AAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala24_Ala26…

NP_004603.1:p.Ala24_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAA (AlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[7] AAAAAAAAA [GCGGCG] > AAAA…

AAAAAAAAA [GCGGCG] > AAAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala25_Ala26…

NP_004603.1:p.Ala25_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAA (AlaAlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[8] AAAAAAAAA [GCG] > AAAAAAA…

AAAAAAAAA [GCG] > AAAAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala26del AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[10] AAAAAAAAA [CTG] > AAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAA [GCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala26dup AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[11] AAAAAAAAA [CTG] > AAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAA [GCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala25_Ala26…

NP_004603.1:p.Ala25_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[12] AAAAAAAAA [CTG] > AAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAA [GCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala24_Ala26…

NP_004603.1:p.Ala24_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[13] AAAAAAAAA [CTG] > AAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAA [GCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala23_Ala26…

NP_004603.1:p.Ala23_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[14] AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [GCGGCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala22_Ala26…

NP_004603.1:p.Ala22_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 1 NM_004612.4:c.52GCG[15] AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [GCGGCGGCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Ala21_Ala26…

NP_004603.1:p.Ala21_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[3] AAAAAAAAA [GCGGCGGCGGCGGC…

AAAAAAAAA [GCGGCGGCGGCGGCGGCG] > AAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala21_Al…

NP_001124388.1:p.Ala21_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAA (AlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[4] AAAAAAAAA [GCGGCGGCGGCGGC…

AAAAAAAAA [GCGGCGGCGGCGGCG] > AAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala22_Al…

NP_001124388.1:p.Ala22_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAA (AlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[5] AAAAAAAAA [GCGGCGGCGGCG] …

AAAAAAAAA [GCGGCGGCGGCG] > AAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala23_Al…

NP_001124388.1:p.Ala23_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAA (AlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[6] AAAAAAAAA [GCGGCGGCG] > A…

AAAAAAAAA [GCGGCGGCG] > AAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala24_Al…

NP_001124388.1:p.Ala24_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAA (AlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[7] AAAAAAAAA [GCGGCG] > AAAA…

AAAAAAAAA [GCGGCG] > AAAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala25_Al…

NP_001124388.1:p.Ala25_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAA (AlaAlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[8] AAAAAAAAA [GCG] > AAAAAAA…

AAAAAAAAA [GCG] > AAAAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala26del AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[10] AAAAAAAAA [CTG] > AAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAA [GCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala26dup AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[11] AAAAAAAAA [CTG] > AAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAA [GCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala25_Al…

NP_001124388.1:p.Ala25_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[12] AAAAAAAAA [CTG] > AAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAA [GCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala24_Al…

NP_001124388.1:p.Ala24_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[13] AAAAAAAAA [CTG] > AAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAA [GCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala23_Al…

NP_001124388.1:p.Ala23_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[14] AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [GCGGCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala22_Al…

NP_001124388.1:p.Ala22_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 2 NM_001130916.3:c.52GCG[15] AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [GCGGCGGCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Ala21_Al…

NP_001124388.1:p.Ala21_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[3] AAAAAAAAA [GCGGCGGCGGCGGC…

AAAAAAAAA [GCGGCGGCGGCGGCGGCG] > AAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala21_Al…

NP_001293139.1:p.Ala21_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAA (AlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[4] AAAAAAAAA [GCGGCGGCGGCGGC…

AAAAAAAAA [GCGGCGGCGGCGGCG] > AAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala22_Al…

NP_001293139.1:p.Ala22_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAA (AlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[5] AAAAAAAAA [GCGGCGGCGGCG] …

AAAAAAAAA [GCGGCGGCGGCG] > AAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala23_Al…

NP_001293139.1:p.Ala23_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAA (AlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[6] AAAAAAAAA [GCGGCGGCG] > A…

AAAAAAAAA [GCGGCGGCG] > AAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala24_Al…

NP_001293139.1:p.Ala24_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAA (AlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[7] AAAAAAAAA [GCGGCG] > AAAA…

AAAAAAAAA [GCGGCG] > AAAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala25_Al…

NP_001293139.1:p.Ala25_Ala26del

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAA (AlaAlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[8] AAAAAAAAA [GCG] > AAAAAAA…

AAAAAAAAA [GCG] > AAAAAAAA []

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala26del AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAla)

Inframe Deletion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[10] AAAAAAAAA [CTG] > AAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAA [GCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala26dup AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[11] AAAAAAAAA [CTG] > AAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAA [GCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala25_Al…

NP_001293139.1:p.Ala25_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[12] AAAAAAAAA [CTG] > AAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAA [GCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala24_Al…

NP_001293139.1:p.Ala24_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[13] AAAAAAAAA [CTG] > AAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAA [GCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala23_Al…

NP_001293139.1:p.Ala23_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[14] AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAAA [GCGGCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala22_Al…

NP_001293139.1:p.Ala22_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant 3 NM_001306210.2:c.52GCG[15] AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [...

AAAAAAAAA [CTG] > AAAAAAAAAAAAAAA [GCGGCGGCGGCGGCGGCGCTG]

Coding Sequence Variant
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Ala21_Al…

NP_001293139.1:p.Ala21_Ala26dup

AAAAAAAAA (AlaAlaAlaAlaAl…

AAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAla) > AAAAAAAAAAAAAAA (AlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAlaAla)

Inframe Insertion
TGFBR1 transcript variant X2 XM_011518949.3:c.-111+115…

XM_011518949.3:c.-111+1150GGC[3]

N/A Intron Variant
TGFBR1 transcript variant X1 XM_011518948.3:c. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: del(GCG)6 (allele ID: 1428052 )
ClinVar Accession Disease Names Clinical Significance
RCV001926829.3 Familial thoracic aortic aneurysm and aortic dissection Uncertain-Significance
Allele: del(GCG)5 (allele ID: 487460 )
ClinVar Accession Disease Names Clinical Significance
RCV000588865.4 not provided Conflicting-Interpretations-Of-Pathogenicity
Allele: del(GCG)4 (allele ID: 503073 )
ClinVar Accession Disease Names Clinical Significance
RCV001069917.4 Familial thoracic aortic aneurysm and aortic dissection Uncertain-Significance
RCV001719118.3 not provided Likely-Benign
Allele: del(GCG)3 (allele ID: 174853 )
ClinVar Accession Disease Names Clinical Significance
RCV000152000.19 not specified Benign
RCV000203000.6 Loeys-Dietz syndrome Benign-Likely-Benign
RCV000206714.15 Familial thoracic aortic aneurysm and aortic dissection Benign
RCV000263723.5 Loeys-Dietz syndrome 1 Benign
RCV000617041.2 Cardiovascular phenotype Benign
RCV000755402.10 not provided Benign
RCV002277299.1 Ehlers-Danlos syndrome Benign
Allele: del(GCG)2 (allele ID: 258605 )
ClinVar Accession Disease Names Clinical Significance
RCV000246749.2 Cardiovascular phenotype Benign
RCV000865938.8 Familial thoracic aortic aneurysm and aortic dissection Benign
RCV001705391.2 not provided Likely-Benign
Allele: delGCG (allele ID: 210154 )
ClinVar Accession Disease Names Clinical Significance
RCV000199722.11 not specified Likely-Benign
RCV000246233.11 Familial thoracic aortic aneurysm and aortic dissection Benign-Likely-Benign
RCV001722085.5 not provided Benign
RCV002277547.1 Ehlers-Danlos syndrome Likely-Benign
Allele: dupGCG (allele ID: 210155 )
ClinVar Accession Disease Names Clinical Significance
RCV000195794.11 not specified Conflicting-Interpretations-Of-Pathogenicity
RCV000526310.12 Familial thoracic aortic aneurysm and aortic dissection Likely-Benign
RCV001579589.5 not provided Likely-Benign
Allele: dup(GCG)2 (allele ID: 487391 )
ClinVar Accession Disease Names Clinical Significance
RCV000590468.5 not provided Conflicting-Interpretations-Of-Pathogenicity
RCV000704697.5 Familial thoracic aortic aneurysm and aortic dissection Uncertain-Significance
Allele: dup(GCG)3 (allele ID: 397511 )
ClinVar Accession Disease Names Clinical Significance
RCV000465262.6 Familial thoracic aortic aneurysm and aortic dissection Uncertain-Significance
RCV001704558.5 not provided Conflicting-Interpretations-Of-Pathogenicity
Allele: dup(GCG)4 (allele ID: 525228 )
ClinVar Accession Disease Names Clinical Significance
RCV000654792.4 Familial thoracic aortic aneurysm and aortic dissection Uncertain-Significance
Allele: dup(GCG)5 (allele ID: 1008815 )
ClinVar Accession Disease Names Clinical Significance
RCV001326875.4 Familial thoracic aortic aneurysm and aortic dissection Uncertain-Significance
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (GGC)9G= del(GCG)6 del(GCG)5 del(GCG)4 del(GCG)3 del(GCG)2 delGCG dupGCG dup(GCG)2 dup(GCG)3 dup(GCG)4 dup(GCG)5 dup(GCG)6
GRCh38.p14 chr 9 NC_000009.12:g.99105256_99105283= NC_000009.12:g.99105257GCG[3] NC_000009.12:g.99105257GCG[4] NC_000009.12:g.99105257GCG[5] NC_000009.12:g.99105257GCG[6] NC_000009.12:g.99105257GCG[7] NC_000009.12:g.99105257GCG[8] NC_000009.12:g.99105257GCG[10] NC_000009.12:g.99105257GCG[11] NC_000009.12:g.99105257GCG[12] NC_000009.12:g.99105257GCG[13] NC_000009.12:g.99105257GCG[14] NC_000009.12:g.99105257GCG[15]
GRCh37.p13 chr 9 NC_000009.11:g.101867538_101867565= NC_000009.11:g.101867539GCG[3] NC_000009.11:g.101867539GCG[4] NC_000009.11:g.101867539GCG[5] NC_000009.11:g.101867539GCG[6] NC_000009.11:g.101867539GCG[7] NC_000009.11:g.101867539GCG[8] NC_000009.11:g.101867539GCG[10] NC_000009.11:g.101867539GCG[11] NC_000009.11:g.101867539GCG[12] NC_000009.11:g.101867539GCG[13] NC_000009.11:g.101867539GCG[14] NC_000009.11:g.101867539GCG[15]
TGFBR1 RefSeqGene NG_007461.1:g.5127_5154= NG_007461.1:g.5128GCG[3] NG_007461.1:g.5128GCG[4] NG_007461.1:g.5128GCG[5] NG_007461.1:g.5128GCG[6] NG_007461.1:g.5128GCG[7] NG_007461.1:g.5128GCG[8] NG_007461.1:g.5128GCG[10] NG_007461.1:g.5128GCG[11] NG_007461.1:g.5128GCG[12] NG_007461.1:g.5128GCG[13] NG_007461.1:g.5128GCG[14] NG_007461.1:g.5128GCG[15]
TGFBR1 transcript variant 1 NM_004612.4:c.51_78= NM_004612.4:c.52GCG[3] NM_004612.4:c.52GCG[4] NM_004612.4:c.52GCG[5] NM_004612.4:c.52GCG[6] NM_004612.4:c.52GCG[7] NM_004612.4:c.52GCG[8] NM_004612.4:c.52GCG[10] NM_004612.4:c.52GCG[11] NM_004612.4:c.52GCG[12] NM_004612.4:c.52GCG[13] NM_004612.4:c.52GCG[14] NM_004612.4:c.52GCG[15]
TGFBR1 transcript variant 1 NM_004612.3:c.51_78= NM_004612.3:c.52GCG[3] NM_004612.3:c.52GCG[4] NM_004612.3:c.52GCG[5] NM_004612.3:c.52GCG[6] NM_004612.3:c.52GCG[7] NM_004612.3:c.52GCG[8] NM_004612.3:c.52GCG[10] NM_004612.3:c.52GCG[11] NM_004612.3:c.52GCG[12] NM_004612.3:c.52GCG[13] NM_004612.3:c.52GCG[14] NM_004612.3:c.52GCG[15]
TGFBR1 transcript variant 1 NM_004612.2:c.51_78= NM_004612.2:c.52GCG[3] NM_004612.2:c.52GCG[4] NM_004612.2:c.52GCG[5] NM_004612.2:c.52GCG[6] NM_004612.2:c.52GCG[7] NM_004612.2:c.52GCG[8] NM_004612.2:c.52GCG[10] NM_004612.2:c.52GCG[11] NM_004612.2:c.52GCG[12] NM_004612.2:c.52GCG[13] NM_004612.2:c.52GCG[14] NM_004612.2:c.52GCG[15]
TGFBR1 transcript variant 2 NM_001130916.3:c.51_78= NM_001130916.3:c.52GCG[3] NM_001130916.3:c.52GCG[4] NM_001130916.3:c.52GCG[5] NM_001130916.3:c.52GCG[6] NM_001130916.3:c.52GCG[7] NM_001130916.3:c.52GCG[8] NM_001130916.3:c.52GCG[10] NM_001130916.3:c.52GCG[11] NM_001130916.3:c.52GCG[12] NM_001130916.3:c.52GCG[13] NM_001130916.3:c.52GCG[14] NM_001130916.3:c.52GCG[15]
TGFBR1 transcript variant 2 NM_001130916.2:c.51_78= NM_001130916.2:c.52GCG[3] NM_001130916.2:c.52GCG[4] NM_001130916.2:c.52GCG[5] NM_001130916.2:c.52GCG[6] NM_001130916.2:c.52GCG[7] NM_001130916.2:c.52GCG[8] NM_001130916.2:c.52GCG[10] NM_001130916.2:c.52GCG[11] NM_001130916.2:c.52GCG[12] NM_001130916.2:c.52GCG[13] NM_001130916.2:c.52GCG[14] NM_001130916.2:c.52GCG[15]
TGFBR1 transcript variant 2 NM_001130916.1:c.51_78= NM_001130916.1:c.52GCG[3] NM_001130916.1:c.52GCG[4] NM_001130916.1:c.52GCG[5] NM_001130916.1:c.52GCG[6] NM_001130916.1:c.52GCG[7] NM_001130916.1:c.52GCG[8] NM_001130916.1:c.52GCG[10] NM_001130916.1:c.52GCG[11] NM_001130916.1:c.52GCG[12] NM_001130916.1:c.52GCG[13] NM_001130916.1:c.52GCG[14] NM_001130916.1:c.52GCG[15]
TGFBR1 transcript variant 3 NM_001306210.2:c.51_78= NM_001306210.2:c.52GCG[3] NM_001306210.2:c.52GCG[4] NM_001306210.2:c.52GCG[5] NM_001306210.2:c.52GCG[6] NM_001306210.2:c.52GCG[7] NM_001306210.2:c.52GCG[8] NM_001306210.2:c.52GCG[10] NM_001306210.2:c.52GCG[11] NM_001306210.2:c.52GCG[12] NM_001306210.2:c.52GCG[13] NM_001306210.2:c.52GCG[14] NM_001306210.2:c.52GCG[15]
TGFBR1 transcript variant 3 NM_001306210.1:c.51_78= NM_001306210.1:c.52GCG[3] NM_001306210.1:c.52GCG[4] NM_001306210.1:c.52GCG[5] NM_001306210.1:c.52GCG[6] NM_001306210.1:c.52GCG[7] NM_001306210.1:c.52GCG[8] NM_001306210.1:c.52GCG[10] NM_001306210.1:c.52GCG[11] NM_001306210.1:c.52GCG[12] NM_001306210.1:c.52GCG[13] NM_001306210.1:c.52GCG[14] NM_001306210.1:c.52GCG[15]
TGFBR1 transcript variant 8 NM_001407420.1:c.-293_-266= NM_001407420.1:c.-292GCG[3] NM_001407420.1:c.-292GCG[4] NM_001407420.1:c.-292GCG[5] NM_001407420.1:c.-292GCG[6] NM_001407420.1:c.-292GCG[7] NM_001407420.1:c.-292GCG[8] NM_001407420.1:c.-292GCG[10] NM_001407420.1:c.-292GCG[11] NM_001407420.1:c.-292GCG[12] NM_001407420.1:c.-292GCG[13] NM_001407420.1:c.-292GCG[14] NM_001407420.1:c.-292GCG[15]
TGFBR1 transcript variant 16 NM_001407429.1:c.-293_-266= NM_001407429.1:c.-292GCG[3] NM_001407429.1:c.-292GCG[4] NM_001407429.1:c.-292GCG[5] NM_001407429.1:c.-292GCG[6] NM_001407429.1:c.-292GCG[7] NM_001407429.1:c.-292GCG[8] NM_001407429.1:c.-292GCG[10] NM_001407429.1:c.-292GCG[11] NM_001407429.1:c.-292GCG[12] NM_001407429.1:c.-292GCG[13] NM_001407429.1:c.-292GCG[14] NM_001407429.1:c.-292GCG[15]
TGFBR1 transcript variant 9 NM_001407422.1:c.-262_-235= NM_001407422.1:c.-261GCG[3] NM_001407422.1:c.-261GCG[4] NM_001407422.1:c.-261GCG[5] NM_001407422.1:c.-261GCG[6] NM_001407422.1:c.-261GCG[7] NM_001407422.1:c.-261GCG[8] NM_001407422.1:c.-261GCG[10] NM_001407422.1:c.-261GCG[11] NM_001407422.1:c.-261GCG[12] NM_001407422.1:c.-261GCG[13] NM_001407422.1:c.-261GCG[14] NM_001407422.1:c.-261GCG[15]
TGFBR1 transcript variant 26 NR_176361.1:n.144_171= NR_176361.1:n.145GCG[3] NR_176361.1:n.145GCG[4] NR_176361.1:n.145GCG[5] NR_176361.1:n.145GCG[6] NR_176361.1:n.145GCG[7] NR_176361.1:n.145GCG[8] NR_176361.1:n.145GCG[10] NR_176361.1:n.145GCG[11] NR_176361.1:n.145GCG[12] NR_176361.1:n.145GCG[13] NR_176361.1:n.145GCG[14] NR_176361.1:n.145GCG[15]
TGFBR1 transcript variant 13 NM_001407426.1:c.-262_-235= NM_001407426.1:c.-261GCG[3] NM_001407426.1:c.-261GCG[4] NM_001407426.1:c.-261GCG[5] NM_001407426.1:c.-261GCG[6] NM_001407426.1:c.-261GCG[7] NM_001407426.1:c.-261GCG[8] NM_001407426.1:c.-261GCG[10] NM_001407426.1:c.-261GCG[11] NM_001407426.1:c.-261GCG[12] NM_001407426.1:c.-261GCG[13] NM_001407426.1:c.-261GCG[14] NM_001407426.1:c.-261GCG[15]
TGFBR1 transcript variant 15 NM_001407428.1:c.-217_-190= NM_001407428.1:c.-216GCG[3] NM_001407428.1:c.-216GCG[4] NM_001407428.1:c.-216GCG[5] NM_001407428.1:c.-216GCG[6] NM_001407428.1:c.-216GCG[7] NM_001407428.1:c.-216GCG[8] NM_001407428.1:c.-216GCG[10] NM_001407428.1:c.-216GCG[11] NM_001407428.1:c.-216GCG[12] NM_001407428.1:c.-216GCG[13] NM_001407428.1:c.-216GCG[14] NM_001407428.1:c.-216GCG[15]
TGFBR1 transcript variant 25 NR_176360.1:n.144_171= NR_176360.1:n.145GCG[3] NR_176360.1:n.145GCG[4] NR_176360.1:n.145GCG[5] NR_176360.1:n.145GCG[6] NR_176360.1:n.145GCG[7] NR_176360.1:n.145GCG[8] NR_176360.1:n.145GCG[10] NR_176360.1:n.145GCG[11] NR_176360.1:n.145GCG[12] NR_176360.1:n.145GCG[13] NR_176360.1:n.145GCG[14] NR_176360.1:n.145GCG[15]
TGFBR1 transcript variant 27 NR_176362.1:n.144_171= NR_176362.1:n.145GCG[3] NR_176362.1:n.145GCG[4] NR_176362.1:n.145GCG[5] NR_176362.1:n.145GCG[6] NR_176362.1:n.145GCG[7] NR_176362.1:n.145GCG[8] NR_176362.1:n.145GCG[10] NR_176362.1:n.145GCG[11] NR_176362.1:n.145GCG[12] NR_176362.1:n.145GCG[13] NR_176362.1:n.145GCG[14] NR_176362.1:n.145GCG[15]
TGFBR1 transcript variant 28 NR_176363.1:n.144_171= NR_176363.1:n.145GCG[3] NR_176363.1:n.145GCG[4] NR_176363.1:n.145GCG[5] NR_176363.1:n.145GCG[6] NR_176363.1:n.145GCG[7] NR_176363.1:n.145GCG[8] NR_176363.1:n.145GCG[10] NR_176363.1:n.145GCG[11] NR_176363.1:n.145GCG[12] NR_176363.1:n.145GCG[13] NR_176363.1:n.145GCG[14] NR_176363.1:n.145GCG[15]
TGFBR1 transcript variant 4 NM_001407416.1:c.51_78= NM_001407416.1:c.52GCG[3] NM_001407416.1:c.52GCG[4] NM_001407416.1:c.52GCG[5] NM_001407416.1:c.52GCG[6] NM_001407416.1:c.52GCG[7] NM_001407416.1:c.52GCG[8] NM_001407416.1:c.52GCG[10] NM_001407416.1:c.52GCG[11] NM_001407416.1:c.52GCG[12] NM_001407416.1:c.52GCG[13] NM_001407416.1:c.52GCG[14] NM_001407416.1:c.52GCG[15]
TGFBR1 transcript variant 5 NM_001407417.1:c.51_78= NM_001407417.1:c.52GCG[3] NM_001407417.1:c.52GCG[4] NM_001407417.1:c.52GCG[5] NM_001407417.1:c.52GCG[6] NM_001407417.1:c.52GCG[7] NM_001407417.1:c.52GCG[8] NM_001407417.1:c.52GCG[10] NM_001407417.1:c.52GCG[11] NM_001407417.1:c.52GCG[12] NM_001407417.1:c.52GCG[13] NM_001407417.1:c.52GCG[14] NM_001407417.1:c.52GCG[15]
TGFBR1 transcript variant 21 NM_001407435.1:c.51_78= NM_001407435.1:c.52GCG[3] NM_001407435.1:c.52GCG[4] NM_001407435.1:c.52GCG[5] NM_001407435.1:c.52GCG[6] NM_001407435.1:c.52GCG[7] NM_001407435.1:c.52GCG[8] NM_001407435.1:c.52GCG[10] NM_001407435.1:c.52GCG[11] NM_001407435.1:c.52GCG[12] NM_001407435.1:c.52GCG[13] NM_001407435.1:c.52GCG[14] NM_001407435.1:c.52GCG[15]
TGFBR1 transcript variant 22 NM_001407436.1:c.51_78= NM_001407436.1:c.52GCG[3] NM_001407436.1:c.52GCG[4] NM_001407436.1:c.52GCG[5] NM_001407436.1:c.52GCG[6] NM_001407436.1:c.52GCG[7] NM_001407436.1:c.52GCG[8] NM_001407436.1:c.52GCG[10] NM_001407436.1:c.52GCG[11] NM_001407436.1:c.52GCG[12] NM_001407436.1:c.52GCG[13] NM_001407436.1:c.52GCG[14] NM_001407436.1:c.52GCG[15]
TGFBR1 transcript variant 23 NM_001407438.1:c.51_78= NM_001407438.1:c.52GCG[3] NM_001407438.1:c.52GCG[4] NM_001407438.1:c.52GCG[5] NM_001407438.1:c.52GCG[6] NM_001407438.1:c.52GCG[7] NM_001407438.1:c.52GCG[8] NM_001407438.1:c.52GCG[10] NM_001407438.1:c.52GCG[11] NM_001407438.1:c.52GCG[12] NM_001407438.1:c.52GCG[13] NM_001407438.1:c.52GCG[14] NM_001407438.1:c.52GCG[15]
TGFBR1 transcript variant 24 NM_001407437.1:c.51_78= NM_001407437.1:c.52GCG[3] NM_001407437.1:c.52GCG[4] NM_001407437.1:c.52GCG[5] NM_001407437.1:c.52GCG[6] NM_001407437.1:c.52GCG[7] NM_001407437.1:c.52GCG[8] NM_001407437.1:c.52GCG[10] NM_001407437.1:c.52GCG[11] NM_001407437.1:c.52GCG[12] NM_001407437.1:c.52GCG[13] NM_001407437.1:c.52GCG[14] NM_001407437.1:c.52GCG[15]
TGF-beta receptor type-1 isoform 1 precursor NP_004603.1:p.Leu17_Ala26= NP_004603.1:p.Ala21_Ala26del NP_004603.1:p.Ala22_Ala26del NP_004603.1:p.Ala23_Ala26del NP_004603.1:p.Ala24_Ala26del NP_004603.1:p.Ala25_Ala26del NP_004603.1:p.Ala26del NP_004603.1:p.Ala26dup NP_004603.1:p.Ala25_Ala26dup NP_004603.1:p.Ala24_Ala26dup NP_004603.1:p.Ala23_Ala26dup NP_004603.1:p.Ala22_Ala26dup NP_004603.1:p.Ala21_Ala26dup
TGF-beta receptor type-1 isoform 2 precursor NP_001124388.1:p.Leu17_Ala26= NP_001124388.1:p.Ala21_Ala26del NP_001124388.1:p.Ala22_Ala26del NP_001124388.1:p.Ala23_Ala26del NP_001124388.1:p.Ala24_Ala26del NP_001124388.1:p.Ala25_Ala26del NP_001124388.1:p.Ala26del NP_001124388.1:p.Ala26dup NP_001124388.1:p.Ala25_Ala26dup NP_001124388.1:p.Ala24_Ala26dup NP_001124388.1:p.Ala23_Ala26dup NP_001124388.1:p.Ala22_Ala26dup NP_001124388.1:p.Ala21_Ala26dup
TGF-beta receptor type-1 isoform 3 precursor NP_001293139.1:p.Leu17_Ala26= NP_001293139.1:p.Ala21_Ala26del NP_001293139.1:p.Ala22_Ala26del NP_001293139.1:p.Ala23_Ala26del NP_001293139.1:p.Ala24_Ala26del NP_001293139.1:p.Ala25_Ala26del NP_001293139.1:p.Ala26del NP_001293139.1:p.Ala26dup NP_001293139.1:p.Ala25_Ala26dup NP_001293139.1:p.Ala24_Ala26dup NP_001293139.1:p.Ala23_Ala26dup NP_001293139.1:p.Ala22_Ala26dup NP_001293139.1:p.Ala21_Ala26dup
TGFBR1 transcript variant X2 XM_011518949.3:c.-111+1150= XM_011518949.3:c.-111+1150GGC[3] XM_011518949.3:c.-111+1150GGC[4] XM_011518949.3:c.-111+1150GGC[5] XM_011518949.3:c.-111+1150GGC[6] XM_011518949.3:c.-111+1150GGC[7] XM_011518949.3:c.-111+1150GGC[8] XM_011518949.3:c.-111+1150GGC[10] XM_011518949.3:c.-111+1150GGC[11] XM_011518949.3:c.-111+1150GGC[12] XM_011518949.3:c.-111+1150GGC[13] XM_011518949.3:c.-111+1150GGC[14] XM_011518949.3:c.-111+1150GGC[15]
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

63 SubSNP, 36 Frequency, 27 ClinVar submissions
No Submitter Submission ID Date (Build)
1 IIPGA-WEISS-MARTINEZ ss15356789 Feb 28, 2004 (120)
2 1000GENOMES ss1368539259 Aug 21, 2014 (136)
3 1000GENOMES ss1368539263 Aug 21, 2014 (136)
4 EVA_EXAC ss1711915638 Apr 01, 2015 (136)
5 EVA_EXAC ss1711915639 Oct 12, 2018 (152)
6 CLINVAR ss1960973297 Dec 03, 2015 (146)
7 CLINVAR ss1960973298 Oct 12, 2018 (152)
8 CLINVAR ss2136310601 Nov 14, 2016 (149)
9 CLINVAR ss2137513621 Oct 12, 2018 (152)
10 SWEGEN ss3005308431 Nov 08, 2017 (151)
11 KOEX ss3029675620 Nov 08, 2017 (151)
12 EVA_DECODE ss3724409125 Jul 13, 2019 (153)
13 EVA_DECODE ss3724409126 Jul 13, 2019 (153)
14 EVA_DECODE ss3724409127 Jul 13, 2019 (153)
15 EVA_DECODE ss3724409128 Jul 13, 2019 (153)
16 ACPOP ss3736722025 Jul 13, 2019 (153)
17 ACPOP ss3736722026 Jul 13, 2019 (153)
18 KHV_HUMAN_GENOMES ss3812640040 Jul 13, 2019 (153)
19 KOGIC ss3966403909 Apr 26, 2020 (154)
20 KOGIC ss3966403910 Apr 26, 2020 (154)
21 KOGIC ss3966403911 Apr 26, 2020 (154)
22 KOGIC ss3966403912 Apr 26, 2020 (154)
23 GNOMAD ss4206439888 Apr 26, 2021 (155)
24 GNOMAD ss4206439889 Apr 26, 2021 (155)
25 GNOMAD ss4206439890 Apr 26, 2021 (155)
26 GNOMAD ss4206439891 Apr 26, 2021 (155)
27 GNOMAD ss4206439892 Apr 26, 2021 (155)
28 GNOMAD ss4206439893 Apr 26, 2021 (155)
29 GNOMAD ss4206439894 Apr 26, 2021 (155)
30 GNOMAD ss4206439895 Apr 26, 2021 (155)
31 GNOMAD ss4206439896 Apr 26, 2021 (155)
32 GNOMAD ss4206439897 Apr 26, 2021 (155)
33 GNOMAD ss4206439898 Apr 26, 2021 (155)
34 TOPMED ss4829531691 Apr 26, 2021 (155)
35 TOPMED ss4829531692 Apr 26, 2021 (155)
36 EVA ss5141947439 Apr 26, 2021 (155)
37 TOMMO_GENOMICS ss5194514242 Apr 26, 2021 (155)
38 TOMMO_GENOMICS ss5194514243 Apr 26, 2021 (155)
39 TOMMO_GENOMICS ss5194514244 Apr 26, 2021 (155)
40 TOMMO_GENOMICS ss5194514245 Apr 26, 2021 (155)
41 TOMMO_GENOMICS ss5194514246 Apr 26, 2021 (155)
42 TOMMO_GENOMICS ss5194514247 Apr 26, 2021 (155)
43 1000G_HIGH_COVERAGE ss5281572623 Oct 13, 2022 (156)
44 1000G_HIGH_COVERAGE ss5281572624 Oct 13, 2022 (156)
45 1000G_HIGH_COVERAGE ss5281572625 Oct 13, 2022 (156)
46 1000G_HIGH_COVERAGE ss5281572626 Oct 13, 2022 (156)
47 1000G_HIGH_COVERAGE ss5281572627 Oct 13, 2022 (156)
48 1000G_HIGH_COVERAGE ss5281572628 Oct 13, 2022 (156)
49 HUGCELL_USP ss5477497472 Oct 13, 2022 (156)
50 HUGCELL_USP ss5477497473 Oct 13, 2022 (156)
51 HUGCELL_USP ss5477497474 Oct 13, 2022 (156)
52 EVA ss5624186061 Oct 13, 2022 (156)
53 TOMMO_GENOMICS ss5738816061 Oct 13, 2022 (156)
54 TOMMO_GENOMICS ss5738816062 Oct 13, 2022 (156)
55 TOMMO_GENOMICS ss5738816063 Oct 13, 2022 (156)
56 TOMMO_GENOMICS ss5738816064 Oct 13, 2022 (156)
57 TOMMO_GENOMICS ss5738816065 Oct 13, 2022 (156)
58 TOMMO_GENOMICS ss5738816066 Oct 13, 2022 (156)
59 EVA ss5829508048 Oct 13, 2022 (156)
60 EVA ss5829508049 Oct 13, 2022 (156)
61 EVA ss5848726372 Oct 13, 2022 (156)
62 EVA ss5848726373 Oct 13, 2022 (156)
63 EVA ss5935996537 Oct 13, 2022 (156)
64 1000Genomes NC_000009.11 - 101867538 Oct 12, 2018 (152)
65 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
66 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
67 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
68 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
69 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
70 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
71 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
72 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
73 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
74 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
75 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 332642196 (NC_000009.12:99105255::GGC 108/131096)
Row 332642197 (NC_000009.12:99105255::GGCGGC 26/131100)
Row 332642198 (NC_000009.12:99105255::GGCGGCGGC 9/131100)...

- Apr 26, 2021 (155)
76 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 6935497 (NC_000009.11:101867537::GGC 1/584)
Row 6935498 (NC_000009.11:101867537:GGC: 3/584)
Row 6935499 (NC_000009.11:101867537:GGCGGCGGC: 34/584)

- Jul 13, 2019 (153)
77 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 6935497 (NC_000009.11:101867537::GGC 1/584)
Row 6935498 (NC_000009.11:101867537:GGC: 3/584)
Row 6935499 (NC_000009.11:101867537:GGCGGCGGC: 34/584)

- Jul 13, 2019 (153)
78 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 6935497 (NC_000009.11:101867537::GGC 1/584)
Row 6935498 (NC_000009.11:101867537:GGC: 3/584)
Row 6935499 (NC_000009.11:101867537:GGCGGCGGC: 34/584)

- Jul 13, 2019 (153)
79 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22781910 (NC_000009.12:99105267::GGC 2/1744)
Row 22781911 (NC_000009.12:99105258:GGCGGCGGC: 1/1744)
Row 22781912 (NC_000009.12:99105255:GGCGGCGGCGGC: 1/1744)...

- Apr 26, 2020 (154)
80 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22781910 (NC_000009.12:99105267::GGC 2/1744)
Row 22781911 (NC_000009.12:99105258:GGCGGCGGC: 1/1744)
Row 22781912 (NC_000009.12:99105255:GGCGGCGGCGGC: 1/1744)...

- Apr 26, 2020 (154)
81 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22781910 (NC_000009.12:99105267::GGC 2/1744)
Row 22781911 (NC_000009.12:99105258:GGCGGCGGC: 1/1744)
Row 22781912 (NC_000009.12:99105255:GGCGGCGGCGGC: 1/1744)...

- Apr 26, 2020 (154)
82 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22781910 (NC_000009.12:99105267::GGC 2/1744)
Row 22781911 (NC_000009.12:99105258:GGCGGCGGC: 1/1744)
Row 22781912 (NC_000009.12:99105255:GGCGGCGGCGGC: 1/1744)...

- Apr 26, 2020 (154)
83 Northern Sweden

Submission ignored due to conflicting rows:
Row 10006890 (NC_000009.11:101867537:GGCGGCGGC: 60/598)
Row 10006891 (NC_000009.11:101867537::GGCGGC 1/598)

- Jul 13, 2019 (153)
84 Northern Sweden

Submission ignored due to conflicting rows:
Row 10006890 (NC_000009.11:101867537:GGCGGCGGC: 60/598)
Row 10006891 (NC_000009.11:101867537::GGCGGC 1/598)

- Jul 13, 2019 (153)
85 8.3KJPN

Submission ignored due to conflicting rows:
Row 52483549 (NC_000009.11:101867537::GGC 14/16748)
Row 52483550 (NC_000009.11:101867537::GGCGGC 4/16748)
Row 52483551 (NC_000009.11:101867537:GGCGGCGGC: 14/16748)...

- Apr 26, 2021 (155)
86 8.3KJPN

Submission ignored due to conflicting rows:
Row 52483549 (NC_000009.11:101867537::GGC 14/16748)
Row 52483550 (NC_000009.11:101867537::GGCGGC 4/16748)
Row 52483551 (NC_000009.11:101867537:GGCGGCGGC: 14/16748)...

- Apr 26, 2021 (155)
87 8.3KJPN

Submission ignored due to conflicting rows:
Row 52483549 (NC_000009.11:101867537::GGC 14/16748)
Row 52483550 (NC_000009.11:101867537::GGCGGC 4/16748)
Row 52483551 (NC_000009.11:101867537:GGCGGCGGC: 14/16748)...

- Apr 26, 2021 (155)
88 8.3KJPN

Submission ignored due to conflicting rows:
Row 52483549 (NC_000009.11:101867537::GGC 14/16748)
Row 52483550 (NC_000009.11:101867537::GGCGGC 4/16748)
Row 52483551 (NC_000009.11:101867537:GGCGGCGGC: 14/16748)...

- Apr 26, 2021 (155)
89 8.3KJPN

Submission ignored due to conflicting rows:
Row 52483549 (NC_000009.11:101867537::GGC 14/16748)
Row 52483550 (NC_000009.11:101867537::GGCGGC 4/16748)
Row 52483551 (NC_000009.11:101867537:GGCGGCGGC: 14/16748)...

- Apr 26, 2021 (155)
90 8.3KJPN

Submission ignored due to conflicting rows:
Row 52483549 (NC_000009.11:101867537::GGC 14/16748)
Row 52483550 (NC_000009.11:101867537::GGCGGC 4/16748)
Row 52483551 (NC_000009.11:101867537:GGCGGCGGC: 14/16748)...

- Apr 26, 2021 (155)
91 14KJPN

Submission ignored due to conflicting rows:
Row 72653165 (NC_000009.12:99105255::GGCGGC 6/28244)
Row 72653166 (NC_000009.12:99105255::GGC 26/28244)
Row 72653167 (NC_000009.12:99105255:GGCGGCGGC: 20/28244)...

- Oct 13, 2022 (156)
92 14KJPN

Submission ignored due to conflicting rows:
Row 72653165 (NC_000009.12:99105255::GGCGGC 6/28244)
Row 72653166 (NC_000009.12:99105255::GGC 26/28244)
Row 72653167 (NC_000009.12:99105255:GGCGGCGGC: 20/28244)...

- Oct 13, 2022 (156)
93 14KJPN

Submission ignored due to conflicting rows:
Row 72653165 (NC_000009.12:99105255::GGCGGC 6/28244)
Row 72653166 (NC_000009.12:99105255::GGC 26/28244)
Row 72653167 (NC_000009.12:99105255:GGCGGCGGC: 20/28244)...

- Oct 13, 2022 (156)
94 14KJPN

Submission ignored due to conflicting rows:
Row 72653165 (NC_000009.12:99105255::GGCGGC 6/28244)
Row 72653166 (NC_000009.12:99105255::GGC 26/28244)
Row 72653167 (NC_000009.12:99105255:GGCGGCGGC: 20/28244)...

- Oct 13, 2022 (156)
95 14KJPN

Submission ignored due to conflicting rows:
Row 72653165 (NC_000009.12:99105255::GGCGGC 6/28244)
Row 72653166 (NC_000009.12:99105255::GGC 26/28244)
Row 72653167 (NC_000009.12:99105255:GGCGGCGGC: 20/28244)...

- Oct 13, 2022 (156)
96 14KJPN

Submission ignored due to conflicting rows:
Row 72653165 (NC_000009.12:99105255::GGCGGC 6/28244)
Row 72653166 (NC_000009.12:99105255::GGC 26/28244)
Row 72653167 (NC_000009.12:99105255:GGCGGCGGC: 20/28244)...

- Oct 13, 2022 (156)
97 TopMed

Submission ignored due to conflicting rows:
Row 666909252 (NC_000009.12:99105255:GGCGGCGGC: 19521/264690)
Row 666909253 (NC_000009.12:99105255:GGCGGCGGCGGCGGCGGC: 4/264690)

- Apr 26, 2021 (155)
98 TopMed

Submission ignored due to conflicting rows:
Row 666909252 (NC_000009.12:99105255:GGCGGCGGC: 19521/264690)
Row 666909253 (NC_000009.12:99105255:GGCGGCGGCGGCGGCGGC: 4/264690)

- Apr 26, 2021 (155)
99 ALFA NC_000009.12 - 99105256 Apr 26, 2021 (155)
100 ClinVar RCV000152000.19 Oct 13, 2022 (156)
101 ClinVar RCV000195794.11 Oct 13, 2022 (156)
102 ClinVar RCV000199722.11 Oct 13, 2022 (156)
103 ClinVar RCV000203000.6 Oct 13, 2022 (156)
104 ClinVar RCV000206714.15 Oct 13, 2022 (156)
105 ClinVar RCV000246233.11 Oct 13, 2022 (156)
106 ClinVar RCV000246749.2 Oct 13, 2022 (156)
107 ClinVar RCV000263723.5 Oct 13, 2022 (156)
108 ClinVar RCV000465262.6 Oct 13, 2022 (156)
109 ClinVar RCV000526310.12 Oct 13, 2022 (156)
110 ClinVar RCV000588865.4 Oct 13, 2022 (156)
111 ClinVar RCV000590468.5 Oct 13, 2022 (156)
112 ClinVar RCV000617041.2 Oct 13, 2022 (156)
113 ClinVar RCV000654792.4 Oct 13, 2022 (156)
114 ClinVar RCV000704697.5 Apr 26, 2021 (155)
115 ClinVar RCV000755402.10 Oct 13, 2022 (156)
116 ClinVar RCV000865938.8 Oct 13, 2022 (156)
117 ClinVar RCV001069917.4 Oct 13, 2022 (156)
118 ClinVar RCV001326875.4 Oct 13, 2022 (156)
119 ClinVar RCV001579589.5 Oct 13, 2022 (156)
120 ClinVar RCV001704558.5 Oct 13, 2022 (156)
121 ClinVar RCV001705391.2 Oct 13, 2022 (156)
122 ClinVar RCV001719118.3 Oct 13, 2022 (156)
123 ClinVar RCV001722085.5 Oct 13, 2022 (156)
124 ClinVar RCV001926829.3 Oct 13, 2022 (156)
125 ClinVar RCV002277299.1 Oct 13, 2022 (156)
126 ClinVar RCV002277547.1 Oct 13, 2022 (156)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs554578321 Feb 27, 2017 (136)
rs538831129 May 11, 2017 (136)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4206439898, ss4829531692, ss5738816065 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGC:

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCG

(self)
RCV001926829.3, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCG

(self)
ss4206439897 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGC:

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCG

(self)
RCV000588865.4, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCG

(self)
ss3029675620, ss5194514245 NC_000009.11:101867537:GGCGGCGGCGG…

NC_000009.11:101867537:GGCGGCGGCGGC:

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCG

(self)
ss3724409128, ss3966403911, ss4206439896, ss5281572628, ss5738816064 NC_000009.12:99105255:GGCGGCGGCGGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCG

(self)
RCV001069917.4, RCV001719118.3, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCG

(self)
47053646, ss1368539259, ss1711915638, ss3005308431, ss3736722025, ss5194514244, ss5624186061, ss5829508048 NC_000009.11:101867537:GGCGGCGGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG

(self)
ss5848726372 NC_000009.11:101867556:GCGGCGGCG: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG

ss4206439895, ss4829531691, ss5281572624, ss5477497472, ss5738816063 NC_000009.12:99105255:GGCGGCGGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG

(self)
RCV000152000.19, RCV000203000.6, RCV000206714.15, RCV000263723.5, RCV000617041.2, RCV000755402.10, RCV002277299.1, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG

(self)
ss3724409127, ss3966403910 NC_000009.12:99105258:GGCGGCGGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG

(self)
ss15356789 NT_008470.19:31032087:GGCGGCGGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCG

(self)
ss5194514247 NC_000009.11:101867537:GGCGGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG

(self)
ss4206439894 NC_000009.12:99105255:GGCGGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG

(self)
RCV000246749.2, RCV000865938.8, RCV001705391.2, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG

(self)
ss3724409126 NC_000009.12:99105261:GGCGGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG

(self)
ss2136310601 NC_000009.12:99105277:GCGGCG: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCG

(self)
ss5829508049, ss5935996537 NC_000009.11:101867537:GGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss1368539263 NC_000009.11:101867543:GGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss5848726373 NC_000009.11:101867562:GCG: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG

ss4206439893, ss5141947439, ss5281572623, ss5477497473 NC_000009.12:99105255:GGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG

(self)
RCV000199722.11, RCV000246233.11, RCV001722085.5, RCV002277547.1, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss3724409125, ss3966403912 NC_000009.12:99105264:GGC: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss1960973297 NC_000009.12:99105280:GCG: NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss1711915639, ss5194514242 NC_000009.11:101867537::GGC NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss3812640040, ss4206439888, ss5281572626, ss5477497474, ss5738816062 NC_000009.12:99105255::GGC NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
RCV000195794.11, RCV000526310.12, RCV001579589.5, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss3966403909 NC_000009.12:99105267::GGC NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss1960973298 NC_000009.12:99105283::GCG NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss3736722026, ss5194514243 NC_000009.11:101867537::GGCGGC NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss4206439889, ss5281572627, ss5738816061 NC_000009.12:99105255::GGCGGC NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
RCV000590468.5, RCV000704697.5, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss5194514246 NC_000009.11:101867537::GGCGGCGGC NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss4206439890, ss5738816066 NC_000009.12:99105255::GGCGGCGGC NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
RCV000465262.6, RCV001704558.5, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss2137513621 NC_000009.12:99105283::GCGGCGGCG NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
RCV000654792.4, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss4206439891, ss5281572625 NC_000009.12:99105255::GGCGGCGGCGG…

NC_000009.12:99105255::GGCGGCGGCGGCGGC

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
RCV001326875.4, 6138317673 NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
ss4206439892 NC_000009.12:99105255::GGCGGCGGCGG…

NC_000009.12:99105255::GGCGGCGGCGGCGGCGGC

NC_000009.12:99105255:GGCGGCGGCGGC…

NC_000009.12:99105255:GGCGGCGGCGGCGGCGGCGGCGGCGGCG:GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

20 citations for rs11466445
PMID Title Author Year Journal
12947057 TGFBR1*6A and cancer risk: a meta-analysis of seven case-control studies. Kaklamani VG et al. 2003 Journal of clinical oncology
14966109 TGFBR1*6A and cancer: a meta-analysis of 12 case-control studies. Pasche B et al. 2004 Journal of clinical oncology
15860866 TGFBR1*6A may contribute to hereditary colorectal cancer. Bian Y et al. 2005 Journal of clinical oncology
17575241 Lack of an association between the TGFBR1*6A variant and colorectal cancer risk. Skoglund J et al. 2007 Clinical cancer research
17848956 TGFBR1(*)6A and Int7G24A variants of transforming growth factor-beta receptor 1 in Swedish familial and sporadic breast cancer. Song B et al. 2007 British journal of cancer
19004027 TGFB1 and TGFBR1 polymorphic variants in relationship to bladder cancer risk and prognosis. Castillejo A et al. 2009 International journal of cancer
19538729 The TGFBR1*6A allele is not associated with susceptibility to colorectal cancer in a Spanish population: a case-control study. Castillejo A et al. 2009 BMC cancer
20368424 Comprehensive assessment of variation at the transforming growth factor beta type 1 receptor locus and colorectal cancer predisposition. Carvajal-Carmona LG et al. 2010 Proceedings of the National Academy of Sciences of the United States of America
21515830 Genetic variations in the transforming growth factor-beta pathway as predictors of survival in advanced non-small cell lung cancer. Lin M et al. 2011 Carcinogenesis
21811255 A two-phase case-control study for colorectal cancer genetic susceptibility: candidate genes from chromosomal regions 9q22 and 3q22. Abulí A et al. 2011 British journal of cancer
22292045 TGFBR1 intralocus epistatic interaction as a risk factor for colorectal cancer. Martinez-Canto A et al. 2012 PloS one
22347533 Debate about TGFBR1 and the susceptibility to colorectal cancer. Valle L et al. 2012 World journal of gastrointestinal oncology
22539603 Pathway analyses identify TGFBR2 as potential breast cancer susceptibility gene: results from a consortium study among Asians. Ma X et al. 2012 Cancer epidemiology, biomarkers & prevention
23251617 Genetic variations in the transforming growth factor beta pathway as predictors of bladder cancer risk. Wei H et al. 2012 PloS one
23946381 Genetic variants associated with colorectal cancer risk: comprehensive research synopsis, meta-analysis, and epidemiological evidence. Ma X et al. 2014 Gut
24033266 A systematic approach to assessing the clinical significance of genetic variants. Duzkale H et al. 2013 Clinical genetics
24465802 Biomarkers of TGF-β signaling pathway and prognosis of pancreatic cancer. Javle M et al. 2014 PloS one
24981199 Little evidence for association between the TGFBR1*6A variant and colorectal cancer: a family-based association study on non-syndromic family members from Australia and Spain. Ross JP et al. 2014 BMC cancer
25741868 Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Richards S et al. 2015 Genetics in medicine
31435875 Inherited alterations of TGF beta signaling components in Appalachian cervical cancers. Knobloch TJ et al. 2019 Cancer causes & control
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post825+45319f0