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emp24/gp25L/p24 family/GOLD family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821856, updated on 18-Sep-2024

Summary

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Official Full Name
emp24/gp25L/p24 family/GOLD family protein
Primary source
TAIR:AT3G22845
Locus tag
AT3G22845
See related
Araport:AT3G22845
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (8087238..8088824)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene heat shock transcription factor A6B Neighboring gene Chlorophyll A-B binding family protein Neighboring gene aluminum induced protein with YGL and LRDR motifs Neighboring gene eukaryotic translation initiation factor 3 subunit C2 Neighboring gene F-box and associated interaction domains-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
  2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001338601.1
NM_113184.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in endoplasmic reticulum HDA PubMed 
located_in plant-type vacuole HDA PubMed 

General protein information

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Preferred Names
emp24/gp25L/p24 family/GOLD family protein
NP_188924.3
  • emp24/gp25L/p24 family/GOLD family protein; INVOLVED IN: transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT3G07680.1); Has 1821 Blast hits to 1821 proteins in 239 species: Archae - 0; Bacteria - 0; Metazoa - 918; Fungi - 476; Plants - 264; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    8087238..8088824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113184.5 → NP_188924.3  emp24/gp25L/p24 family/GOLD family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188924.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LIL4
    UniProtKB/TrEMBL
    A0A178VIF6, A0A5S9XF99
    Conserved Domains (1) summary
    pfam01105
    Location:33 → 205
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  2. NM_001338601.1 → NP_001327224.1  emp24/gp25L/p24 family/GOLD family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LRN2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LIL4.1

Gene LinkOut

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