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RBM39P1 RBM39 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 643167, updated on 4-Mar-2025

Summary

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Official Symbol
RBM39P1provided by HGNC
Official Full Name
RBM39 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:54942
See related
Ensembl:ENSG00000214019 AllianceGenome:HGNC:54942
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RBM39P1 in Genome Data Viewer
Location:
Xp11.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (44029135..44031118)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (43435402..43437385)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (43888381..43890364)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene monoamine oxidase B Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:43808655-43809172 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:43809173-43809689 Neighboring gene NDP antisense RNA 1 Neighboring gene norrin cystine knot growth factor NDP Neighboring gene EF-hand domain containing 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20782 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:44111858-44112711 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:44112712-44113564 Neighboring gene Sharpr-MPRA regulatory region 13194 Neighboring gene TatD DNase domain containing 2 pseudogene 1 Neighboring gene ribonucleotide reductase M2 polypeptide pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • RNA binding motif protein 39 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022658.2 

    Range
    1..1984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    44029135..44031118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    43435402..43437385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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