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SYNCRIPP1 SYNCRIP pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 149844, updated on 4-Mar-2025

Summary

Official Symbol
SYNCRIPP1provided by HGNC
Official Full Name
SYNCRIP pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:56945
See related
Ensembl:ENSG00000234241 AllianceGenome:HGNC:56945
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See SYNCRIPP1 in Genome Data Viewer
Location:
20p12.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (6213597..6215339)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (6254824..6256566)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (6194244..6195986)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene FERM domain containing kindlin 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12663 Neighboring gene TARDBP pseudogene 1 Neighboring gene fibroblast growth factor receptor 3 pseudogene 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:6301432-6302266 Neighboring gene MPRA-validated peak4138 silencer Neighboring gene uncharacterized LOC124904866

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002370.6 

    Range
    101..1843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    6213597..6215339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    6254824..6256566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)