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LOC107808217 thioredoxin X, chloroplastic [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107808217, updated on 12-Dec-2024

Summary

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Gene symbol
LOC107808217
Gene description
thioredoxin X, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC107808217 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_11 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015945848.1 (76053..82849, complement)

NW_015945848.1Genomic Context describing neighboring genes Neighboring gene sugar transport protein 10 Neighboring gene probable metal-nicotianamine transporter YSL7 Neighboring gene E2F-associated phosphoprotein Neighboring gene probable prefoldin subunit 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015945848 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-disulfide reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thioredoxin X, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000715135.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015945848.1 Reference Ntab-TN90 Primary Assembly

    Range
    76053..82849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016632711.1 → XP_016488197.1  thioredoxin X, chloroplastic isoform X3

    UniProtKB/TrEMBL
    A0A1S4BH75

  2. XM_016632714.1 → XP_016488200.1  thioredoxin X, chloroplastic isoform X4

    UniProtKB/TrEMBL
    A0A1S4BH46

  3. XM_016632713.1 → XP_016488199.1  thioredoxin X, chloroplastic isoform X3

    UniProtKB/TrEMBL
    A0A1S4BH75

  4. XM_016632710.1 → XP_016488196.1  thioredoxin X, chloroplastic isoform X3

    UniProtKB/TrEMBL
    A0A1S4BH75

  5. XM_016632709.1 → XP_016488195.1  thioredoxin X, chloroplastic isoform X2

    UniProtKB/TrEMBL
    A0A1S4BH41

  6. XM_016632708.1 → XP_016488194.1  thioredoxin X, chloroplastic isoform X1

    UniProtKB/TrEMBL
    A0A1S4BH36
Nucleotide Protein
Heading Accession and Version

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