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LOC105372130 uncharacterized LOC105372130 [ Homo sapiens (human) ]

Gene ID: 105372130, updated on 4-Mar-2025

Summary

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Gene symbol
LOC105372130
Gene description
uncharacterized LOC105372130
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372130 in Genome Data Viewer
Location:
18q21.2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (55665277..55842399)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (55868373..56045176)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene transcription factor 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13360 Neighboring gene uncharacterized LOC105372126 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:53295077-53295576 Neighboring gene ribosomal protein L21 pseudogene 126 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:53388528-53389317 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:53420614-53421813 Neighboring gene Sharpr-MPRA regulatory region 1296 Neighboring gene long intergenic non-protein coding RNA 1415 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:53500200-53501399 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:53517802-53518302 Neighboring gene uncharacterized LOC107985183 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:53525319-53525818 Neighboring gene uncharacterized LOC105372131

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    55665277..55842399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007066382.1 RNA Sequence

  2. XR_935488.3 RNA Sequence

  3. XR_007066383.1 RNA Sequence

  4. XR_935487.3 RNA Sequence

  5. XR_935489.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    55868373..56045176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088188.1 RNA Sequence

  2. XR_007088187.1 RNA Sequence

  3. XR_007088189.1 RNA Sequence

  4. XR_007088190.1 RNA Sequence

  5. XR_007088186.1 RNA Sequence

  6. XR_007088191.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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