nsv3414128
- Organism: Homo sapiens
- Study:nstd162 (Audano et al. 2019)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:12
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Audano et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 223 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 223 SVs from 36 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3414128 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nsv3414128 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14793280 | insertion | SAMN05603729 | Sequencing | de novo and local sequence assembly | 24,108 |
| nssv14794897 | insertion | SAMN04251426 | Sequencing | de novo and local sequence assembly | 22,074 |
| nssv14796520 | insertion | SAMN06885952 | Sequencing | de novo and local sequence assembly | 28,070 |
| nssv14803332 | insertion | SAMN09690649 | Sequencing | de novo and local sequence assembly | 21,495 |
| nssv14803593 | insertion | SAMN05181962 | Sequencing | de novo and local sequence assembly | 23,563 |
| nssv14805179 | insertion | SAMN05603847 | Sequencing | de novo and local sequence assembly | 26,021 |
| nssv14805893 | insertion | SAMN02744161 | Sequencing | de novo and local sequence assembly | 20,941 |
| nssv14806036 | insertion | SAMN03838746 | Sequencing | de novo and local sequence assembly | 26,336 |
| nssv14808771 | insertion | SAMN04229548 | Sequencing | de novo and local sequence assembly | 23,009 |
| nssv14809138 | insertion | SAMN09643900 | Sequencing | de novo and local sequence assembly | 26,631 |
| nssv14809388 | insertion | SAMN09651199 | Sequencing | de novo and local sequence assembly | 27,381 |
| nssv14812031 | insertion | SAMN04229552 | Sequencing | de novo and local sequence assembly | 24,632 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14793280 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14794897 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14796520 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14803332 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14803593 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14805179 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14805893 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14806036 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14808771 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14809138 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14809388 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14812031 | Submitted genomic | NC_000009.12:g.137 846460_137846461in s2790 | GRCh38 (hg38) | NC_000009.12 | Chr9 | 137,846,460 | 137,846,460 | ||
| nssv14793280 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14794897 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14796520 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14803332 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14803593 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14805179 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14805893 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14806036 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14808771 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14809138 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14809388 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |
| nssv14812031 | Remapped | Perfect | NC_000009.11:g.140 740912_140740913in s2790NC_000009.11: g.140740912_140740 913ins2790 | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 140,740,912 | 140,740,912 |