Pathogen: environmental/food/other sample from Esc... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Escherichia coli O83:H31

Identifiers: BioSample: SAMN08611146; SRA: SRS3008318; CFSAN: CFSAN049650

Organism: Escherichia coli O83:H31
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolate name alias	CFSAN049650,1-9
strain	MOD1-EC5404
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| companion animal
source type	animal
collection date	2006-12-06
geographic location	USA
latitude and longitude	missing
collected by	Pennsylvania State University\| Escherichia coli Reference Center
isolation source	intestine
food product origin geographic location	USA:NY
host	Canis lupus familiaris
project name	GenomeTrakr
sequenced by	Pennsylvania State University\| Escherichia coli Reference Center
attribute_package	environmental/food/other
ontological term	canis lupus familiaris:NCBITAXON_9615, intestine:UBERON_0000160
PublicAccession	CFSAN049650
ProjectAccession	PRJNA230969
Species	coli
Genus	Escherichia

BioProject: PRJNA230969 Escherichia
Retrieve all samples from this project

Submission: CFSAN, Edward Dudley; 2018-02-26

Accession:: SAMN08611146
ID:: 8611146

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Escherichia coli O83:H31
Pathogen: environmental/food/other sample from Escherichia coli O83:H31

biosample
Escherichia coli O83:H31 strain MOD1-EC5404, whole genome shotgun sequencing pro...
Escherichia coli O83:H31 strain MOD1-EC5404, whole genome shotgun sequencing project
gi|1829541135|gb|AASASG000000000.1| G010000000

Nucleotide
Escherichia coli O11:H15 strain MOD1-EC5411, whole genome shotgun sequencing pro...
Escherichia coli O11:H15 strain MOD1-EC5411, whole genome shotgun sequencing project
gi|1829541141|gb|AASASK000000000.1| K010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O11:H15
Pathogen: environmental/food/other sample from Escherichia coli O11:H15

biosample
Pathogen: environmental/food/other sample from Escherichia coli O8
Pathogen: environmental/food/other sample from Escherichia coli O8

biosample

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