9JM0: retron Ec86-effector fiber

PDB ID: 9JM0Download
MMDB ID: 257127
PDB Deposition Date: 2024/9/20
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 2.7  Å
Source Organism:
Similar Structures:
Biological Unit for 9JM0: eicosameric; determined by author and by software
Molecular Components in 9JM0
Label Count Molecule
Proteins (8 molecules)
4
Retron Ec86 Reverse Transcriptase
Molecule annotation
4
Retron Ec86 Putative Ribosyltransferase/dna-binding Protein
Molecule annotation
Nucleotides(12 molecules)
4
DNA (85-mer)
Molecule annotation
4
RNA (82-mer)
Molecule annotation
4
RNA (5'-r(p*cp*gp*up*ap*ap*gp*gp*gp*up*gp*cp*gp*cp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
NICOTINAMIDENICOTINAMIDE
2
1
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303