9HDM: Crystal structure of Pyrimidine Nucleoside 2'-Hydroxylase (PDN2'H) from Neurospora crassa in complex with thymidine

PDB ID: 9HDMDownload
MMDB ID: 260063
PDB Deposition Date: 2024/11/12
Updated in MMDB: 2025/03
Experimental Method:
x-ray diffraction
Resolution: 1.55  Å
Source Organism:
Similar Structures:
Biological Unit for 9HDM: monomeric; determined by author
Molecular Components in 9HDM
Label Count Molecule
Protein (1 molecule)
1
Clavaminate Synthase-like Protein
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
MANGANESE (II) IONMANGANESE (II) ION
2
1
THYMIDINETHYMIDINE
3
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303