Entry - *614949 - TRANSMEMBRANE PROTEIN 231; TMEM231 - OMIM
 
* 614949

TRANSMEMBRANE PROTEIN 231; TMEM231


HGNC Approved Gene Symbol: TMEM231

Cytogenetic location: 16q23.1   Genomic coordinates (GRCh38) : 16:75,536,741-75,556,286 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
16q23.1 Joubert syndrome 20 614970 AR 3
Meckel syndrome 11 615397 AR 3

TEXT

Description

TMEM231 is a critical component of a protein complex in the basal body, a ring-like structure that functions in the transition zone at the base of cilia. This complex acts as a barrier to restrict protein diffusion between plasma and ciliary membranes (Chih et al., 2012).


Cloning and Expression

Chih et al. (2012) cloned mouse Tmem231, which encodes a deduced 315-amino acid protein with both N-terminal and C-terminal transmembrane domains. Tmem231 localized to the base of cilia in mouse IMCD3 cells and embryonic fibroblasts. Database analysis revealed no orthologs of Tmem231 in C. elegans or Drosophila.


Gene Function

Using tandem affinity purification and mass spectrometry, Chih et al. (2012) identified Tmem231 as a component of a high molecular mass B9d1-containing ciliary complex in mouse cells. Besides B9d1 and Tmem231, other proteins detected within this complex included Tmem17 (614950), B9d2 (611951), Tctn1 (609863), Tctn2 (613846), Mks1 (609883), Ahi1 (608894), Cc2d2a (612013), and Kctd10 (613421). Knockdown of B9d1, Tmem231, Tmem17, or Cc2d2a via small interfering RNA had a modest effect on cilia formation, but significantly reduced the amount of the somatostatin receptor Sstr3 (182453) that localized to cilia. Knockdown of B9d1, Tmem231, Tmem17, or Cc2d2a also interfered with sonic hedgehog signaling (see SHH, 600725) by preventing the movement of Smo (SMOH; 601500) into the ciliary membrane. Knockout of B9d1 and Tmem231 resulted in delayed ciliogenesis and cilia growth due to absence of diffusion barrier formation. Chih et al. (2012) concluded that formation of a diffusion barrier by the B9d1 complex is required for the formation and retention of cilia components.


Mapping

Hartz (2012) mapped the TMEM231 gene to chromosome 16q23.1 based on an alignment of the TMEM231 sequence (GenBank AK057689) with the genomic sequence (GRCh37).


Molecular Genetics

Joubert Syndrome 20

In 3 patients from 2 French Canadian families with Joubert syndrome-20, (JBTS20; 614970), Srour et al. (2012) identified compound heterozygosity for 2 mutations in the TMEM231 gene (614949.0001 and 614949.0002). The mutations were identified by exome sequencing and confirmed by Sanger sequencing.

Meckel Syndrome, Type 11

In a patient, born of consanguineous Arab parents, with Meckel syndrome type 11 (MKS11; 615397), Shaheen et al. (2013) identified a homozygous mutation in the TMEM231 gene (614949.0003). An unrelated Arab patient with the disorder carried a different homozygous mutation (614949.0004). The findings indicated that TMEM231 mutations can cause variable ciliopathy phenotypes.


Animal Model

Chih et al. (2012) found that knockout of B9d1 or Tmem231 in mice led to lethality around embryonic day 15.5 with severe vascular defects. The phenotypes of B9d1 -/- and Tmem231 -/- mice were indistinguishable and showed signs of disrupted Shh signaling, including microphthalmia and polydactyly, and defects in patterning of the ventral spinal cord, consistent with a ciliopathy. Both B9d1 -/- and Tmem231 -/- embryos showed loss of cilia and altered Shh gene expression, including absence of Shh-positive floorplate cells.


ALLELIC VARIANTS ( 4 Selected Examples):

.0001 JOUBERT SYNDROME 20

TMEM231, TYR4TER
  
RCV000033041...

In 3 patients from 2 French Canadian families with Joubert syndrome-20 (JBTS20; 614970), Srour et al. (2012) identified compound heterozygosity for 2 mutations in the TMEM231 gene: a 12T-A transversion in exon 1, resulting in a tyr4-to-ter (Y4X) substitution, and a 625G-A transition resulting in an asp209-to-asn (D209N; 614949.0002) substitution at a highly conserved residue. The Y4X leads to a nonsense mutation in the canonical isoform and 2 other predicted isoforms of TMEM231, whereas it abolishes the translation initiation methionine in a longer isoform. The D209N variant was seen in 1 of 416 French Canadian controls and in 0.01% of several large databases. Each unaffected parent was heterozygous for 1 of the mutations. Haplotype analysis of both variants suggested a founder effect.


.0002 JOUBERT SYNDROME 20

TMEM231, ASP209ASN
  
RCV000033042...

For discussion of the asp209-to-asn (D209N) mutation in the TMEM231 gene that was found in compound heterozygous state in patients with Joubert syndrome-20 (JBTS20; 614970) by Srour et al. (2012), see 614949.0001.


.0003 MECKEL SYNDROME, TYPE 11

TMEM231, 751G-A
  
RCV000054806...

In a patient, born of consanguineous Arab parents, with Meckel syndrome type 11 (MKS11; 615397), Shaheen et al. (2013) identified a homozygous c.751G-A transition in the last nucleotide of exon 4 of the TMEM231 gene. The mutation was found by exome sequencing of the proband and was not found in several large control databases. Analysis of lymphoblastoid cell lines from the unaffected parents showed that the mutation resulted in a splicing defect and 2 aberrant TMEM231 transcripts: 1 that retained 47 bp from intron 4 (10%) and another that retained 11 bp from intron 4 (5%). Both aberrant transcripts were predicted to result in a frameshift and premature termination (Val251SerfsTer21 and Val251SerfsTer9, respectively). Further analysis indicated that the mutation resulted in nonsense-mediated mRNA decay. Meckel syndrome was diagnosed prenatally by the presence of oligohydramnios, occipital encephalocele, polydactyly, and polycystic kidneys. Therapeutic termination was performed; a previous fetus was similarly affected.


.0004 MECKEL SYNDROME, TYPE 11

TMEM231, GLN301PRO
  
RCV000054807...

In an Arab patient with Meckel syndrome type 11 (MKS11; 615397), Shaheen et al. (2013) identified a homozygous c.902A-C transversion in the TMEM231 gene, resulting in a gln301-to-pro (Q301P) substitution at a highly conserved residue. The mutation was not found in 200 control Saudi exomes. Functional studies of the variant were not performed.


REFERENCES

  1. Chih, B., Liu, P., Chinn, Y., Chalouni, C., Komuves, L. G., Hass, P. E., Sandoval, W., Peterson, A. S. A ciliopathy complex at the transition zone protects the cilia as a privileged membrane domain. Nature Cell Biol. 14: 61-72, 2012. [PubMed: 22179047, related citations] [Full Text]

  2. Hartz, P. A. Personal Communication. Baltimore, Md. 11/27/2012.

  3. Shaheen, R., Ansari, S., Al Mardawi, E., Alshammari, M. J., Alkuraya, F. S. Mutations in TMEM231 cause Meckel-Gruber syndrome. J. Med. Genet. 50: 160-162, 2013. [PubMed: 23349226, related citations] [Full Text]

  4. Srour, M., Hamdan, F. F., Schwartzentruber, J. A., Patry, L., Ospina, L. H., Shevell, M. I., Desilets, V., Dobrzeniecka, S., Mathonnet, G., Lemyre, E., Massicotte, C., Labuda, D., Amrom, D., Andermann, E., Sebire, G., Maranda, B., FORGE Canada Consortium, Rouleau, G. A., Majewski, J., Michaud, J. L. Mutations in TMEM231 cause Joubert syndrome in French Canadians. J. Med. Genet. 49: 636-641, 2012. [PubMed: 23012439, related citations] [Full Text]


Cassandra L. Kniffin - updated : 9/4/2013
Cassandra L. Kniffin - updated : 12/5/2012
Creation Date:
Patricia A. Hartz : 11/27/2012
carol : 05/21/2015
mcolton : 5/15/2015
carol : 9/5/2013
ckniffin : 9/4/2013
carol : 12/6/2012
ckniffin : 12/5/2012
alopez : 11/27/2012

* 614949

TRANSMEMBRANE PROTEIN 231; TMEM231


HGNC Approved Gene Symbol: TMEM231

Cytogenetic location: 16q23.1   Genomic coordinates (GRCh38) : 16:75,536,741-75,556,286 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
16q23.1 Joubert syndrome 20 614970 Autosomal recessive 3
Meckel syndrome 11 615397 Autosomal recessive 3

TEXT

Description

TMEM231 is a critical component of a protein complex in the basal body, a ring-like structure that functions in the transition zone at the base of cilia. This complex acts as a barrier to restrict protein diffusion between plasma and ciliary membranes (Chih et al., 2012).


Cloning and Expression

Chih et al. (2012) cloned mouse Tmem231, which encodes a deduced 315-amino acid protein with both N-terminal and C-terminal transmembrane domains. Tmem231 localized to the base of cilia in mouse IMCD3 cells and embryonic fibroblasts. Database analysis revealed no orthologs of Tmem231 in C. elegans or Drosophila.


Gene Function

Using tandem affinity purification and mass spectrometry, Chih et al. (2012) identified Tmem231 as a component of a high molecular mass B9d1-containing ciliary complex in mouse cells. Besides B9d1 and Tmem231, other proteins detected within this complex included Tmem17 (614950), B9d2 (611951), Tctn1 (609863), Tctn2 (613846), Mks1 (609883), Ahi1 (608894), Cc2d2a (612013), and Kctd10 (613421). Knockdown of B9d1, Tmem231, Tmem17, or Cc2d2a via small interfering RNA had a modest effect on cilia formation, but significantly reduced the amount of the somatostatin receptor Sstr3 (182453) that localized to cilia. Knockdown of B9d1, Tmem231, Tmem17, or Cc2d2a also interfered with sonic hedgehog signaling (see SHH, 600725) by preventing the movement of Smo (SMOH; 601500) into the ciliary membrane. Knockout of B9d1 and Tmem231 resulted in delayed ciliogenesis and cilia growth due to absence of diffusion barrier formation. Chih et al. (2012) concluded that formation of a diffusion barrier by the B9d1 complex is required for the formation and retention of cilia components.


Mapping

Hartz (2012) mapped the TMEM231 gene to chromosome 16q23.1 based on an alignment of the TMEM231 sequence (GenBank AK057689) with the genomic sequence (GRCh37).


Molecular Genetics

Joubert Syndrome 20

In 3 patients from 2 French Canadian families with Joubert syndrome-20, (JBTS20; 614970), Srour et al. (2012) identified compound heterozygosity for 2 mutations in the TMEM231 gene (614949.0001 and 614949.0002). The mutations were identified by exome sequencing and confirmed by Sanger sequencing.

Meckel Syndrome, Type 11

In a patient, born of consanguineous Arab parents, with Meckel syndrome type 11 (MKS11; 615397), Shaheen et al. (2013) identified a homozygous mutation in the TMEM231 gene (614949.0003). An unrelated Arab patient with the disorder carried a different homozygous mutation (614949.0004). The findings indicated that TMEM231 mutations can cause variable ciliopathy phenotypes.


Animal Model

Chih et al. (2012) found that knockout of B9d1 or Tmem231 in mice led to lethality around embryonic day 15.5 with severe vascular defects. The phenotypes of B9d1 -/- and Tmem231 -/- mice were indistinguishable and showed signs of disrupted Shh signaling, including microphthalmia and polydactyly, and defects in patterning of the ventral spinal cord, consistent with a ciliopathy. Both B9d1 -/- and Tmem231 -/- embryos showed loss of cilia and altered Shh gene expression, including absence of Shh-positive floorplate cells.


ALLELIC VARIANTS 4 Selected Examples):

.0001   JOUBERT SYNDROME 20

TMEM231, TYR4TER
SNP: rs397514609, gnomAD: rs397514609, ClinVar: RCV000033041, RCV001778672, RCV002513310

In 3 patients from 2 French Canadian families with Joubert syndrome-20 (JBTS20; 614970), Srour et al. (2012) identified compound heterozygosity for 2 mutations in the TMEM231 gene: a 12T-A transversion in exon 1, resulting in a tyr4-to-ter (Y4X) substitution, and a 625G-A transition resulting in an asp209-to-asn (D209N; 614949.0002) substitution at a highly conserved residue. The Y4X leads to a nonsense mutation in the canonical isoform and 2 other predicted isoforms of TMEM231, whereas it abolishes the translation initiation methionine in a longer isoform. The D209N variant was seen in 1 of 416 French Canadian controls and in 0.01% of several large databases. Each unaffected parent was heterozygous for 1 of the mutations. Haplotype analysis of both variants suggested a founder effect.


.0002   JOUBERT SYNDROME 20

TMEM231, ASP209ASN
SNP: rs200799769, gnomAD: rs200799769, ClinVar: RCV000033042, RCV000255979, RCV000543480, RCV002513311, RCV003155046, RCV004755755

For discussion of the asp209-to-asn (D209N) mutation in the TMEM231 gene that was found in compound heterozygous state in patients with Joubert syndrome-20 (JBTS20; 614970) by Srour et al. (2012), see 614949.0001.


.0003   MECKEL SYNDROME, TYPE 11

TMEM231, 751G-A
SNP: rs397514753, gnomAD: rs397514753, ClinVar: RCV000054806, RCV000162154, RCV001781386, RCV003764728, RCV003915018, RCV003987343

In a patient, born of consanguineous Arab parents, with Meckel syndrome type 11 (MKS11; 615397), Shaheen et al. (2013) identified a homozygous c.751G-A transition in the last nucleotide of exon 4 of the TMEM231 gene. The mutation was found by exome sequencing of the proband and was not found in several large control databases. Analysis of lymphoblastoid cell lines from the unaffected parents showed that the mutation resulted in a splicing defect and 2 aberrant TMEM231 transcripts: 1 that retained 47 bp from intron 4 (10%) and another that retained 11 bp from intron 4 (5%). Both aberrant transcripts were predicted to result in a frameshift and premature termination (Val251SerfsTer21 and Val251SerfsTer9, respectively). Further analysis indicated that the mutation resulted in nonsense-mediated mRNA decay. Meckel syndrome was diagnosed prenatally by the presence of oligohydramnios, occipital encephalocele, polydactyly, and polycystic kidneys. Therapeutic termination was performed; a previous fetus was similarly affected.


.0004   MECKEL SYNDROME, TYPE 11

TMEM231, GLN301PRO
SNP: rs397514754, ClinVar: RCV000054807, RCV003387749

In an Arab patient with Meckel syndrome type 11 (MKS11; 615397), Shaheen et al. (2013) identified a homozygous c.902A-C transversion in the TMEM231 gene, resulting in a gln301-to-pro (Q301P) substitution at a highly conserved residue. The mutation was not found in 200 control Saudi exomes. Functional studies of the variant were not performed.


REFERENCES

  1. Chih, B., Liu, P., Chinn, Y., Chalouni, C., Komuves, L. G., Hass, P. E., Sandoval, W., Peterson, A. S. A ciliopathy complex at the transition zone protects the cilia as a privileged membrane domain. Nature Cell Biol. 14: 61-72, 2012. [PubMed: 22179047] [Full Text: https://doi.org/10.1038/ncb2410]

  2. Hartz, P. A. Personal Communication. Baltimore, Md. 11/27/2012.

  3. Shaheen, R., Ansari, S., Al Mardawi, E., Alshammari, M. J., Alkuraya, F. S. Mutations in TMEM231 cause Meckel-Gruber syndrome. J. Med. Genet. 50: 160-162, 2013. [PubMed: 23349226] [Full Text: https://doi.org/10.1136/jmedgenet-2012-101431]

  4. Srour, M., Hamdan, F. F., Schwartzentruber, J. A., Patry, L., Ospina, L. H., Shevell, M. I., Desilets, V., Dobrzeniecka, S., Mathonnet, G., Lemyre, E., Massicotte, C., Labuda, D., Amrom, D., Andermann, E., Sebire, G., Maranda, B., FORGE Canada Consortium, Rouleau, G. A., Majewski, J., Michaud, J. L. Mutations in TMEM231 cause Joubert syndrome in French Canadians. J. Med. Genet. 49: 636-641, 2012. [PubMed: 23012439] [Full Text: https://doi.org/10.1136/jmedgenet-2012-101132]


Contributors:
Cassandra L. Kniffin - updated : 9/4/2013
Cassandra L. Kniffin - updated : 12/5/2012

Creation Date:
Patricia A. Hartz : 11/27/2012

Edit History:
carol : 05/21/2015
mcolton : 5/15/2015
carol : 9/5/2013
ckniffin : 9/4/2013
carol : 12/6/2012
ckniffin : 12/5/2012
alopez : 11/27/2012