Entry - *613208 - XPC COMPLEX SUBUNIT, DNA DAMAGE RECOGNITION AND REPAIR FACTOR; XPC - OMIM

* 613208

XPC COMPLEX SUBUNIT, DNA DAMAGE RECOGNITION AND REPAIR FACTOR; XPC


Alternative titles; symbols

XPC GENE
XPCC GENE
RAD4, YEAST, HOMOLOG OF; RAD4


HGNC Approved Gene Symbol: XPC

Cytogenetic location: 3p25.1   Genomic coordinates (GRCh38) : 3:14,145,147-14,178,601 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
3p25.1 Xeroderma pigmentosum, group C 278720 AR 3

TEXT

Description

The XPC gene encodes a protein that functions as a damage detector involved in the first step of global genome nucleotide excision DNA repair (Sugasawa et al. (1998); Volker et al., 2001).


Cloning and Expression

Teitz et al. (1987) were able to correct UV sensitivity in a xeroderma pigmentosum group C (XPC; 278720) cell line by transfection with a human cDNA library derived from fibroblasts. UV resistance appeared to be closely linked to resistance to G418, an antibiotic. The authors suggested the gene symbol XPCC (for xeroderma pigmentosum group C-complementing).

Peterson and Legerski (1991) devised a simple, highly efficient cDNA expression system for use in human cells. Legerski and Peterson (1992) used this system to isolate a cDNA clone that restored the ultraviolet sensitivity and unscheduled DNA synthesis of XPC cells to normal levels. The cloned XPC gene was found to encode a highly hydrophilic protein composed of a predicted 823 amino acids and sharing limited homology with the product of the yeast DNA repair gene RAD4. The XPC transcript was undetectable by Northern blotting in most XPC cell lines examined.


Mapping

Mouse cells repair UV-induced damage at 5 to 10% of the magnitude of human cells making it possible to distinguish quantitatively human and mouse DNA repair components in cell hybrids. When Lalley et al. (1984) compared the ability to repair UV-induced DNA damage to the segregation of human chromosomes in the mouse-human hybrid cells, they found a strong correlation with human chromosome 3, indicating that a gene or a cluster of genes required for DNA repair is located on this human chromosome.

Legerski et al. (1994) mapped the XPC gene to chromosome 3p25 by somatic cell hybridization. The mouse homolog of XPC maps to chromosome 6 (van der Spek et al., 1996).


Gene Function

Masutani et al. (1994) reported the purification to homogeneity and subsequent cDNA cloning of a repair complex by in vitro complementation of the XPC defect in a cell-free repair system containing UV-damaged SV40 minichromosomes. The complex had a high affinity for single-stranded DNA and consisted of 2 tightly associated proteins of 125 and 58 kD. The 125-kD subunit was an N-terminally extended version of the XPC gene product, which is thought to represent the human homolog of the RAD4 nucleotide excision repair (NER) gene of Saccharomyces cerevisiae. The 58-kD species turned out to be a human homolog of yeast RAD23. Unexpectedly, a second human counterpart of RAD23 was identified. Masutani et al. (1994) referred to the 2 as HHR23A (600061) and HHR23B (600062). The 2 RAD23 homologs were expressed in the same cells. However, only the HHR23B protein was found in a complex with p125/XPC. Masutani et al. (1994) pointed out that no human mutant defective in HHR23A had been identified.

The XPC-HHR23B complex is specifically involved in global genome but not transcription-coupled NER. Using a DNA damage recognition-competition assay, Sugasawa et al. (1998) identified XPC-HHR23B as the earliest damage detector to initiate NER; it acts before the known damage-binding protein XPA (611153). Coimmunoprecipitation and DNase I footprinting showed that XPC-HHR23B binds to a variety of NER lesions. This provides a plausible explanation for the extreme damage specificity exhibited by global genome repair.

Volker et al. (2001) described the assembly of the NER complex in normal and repair-deficient (xeroderma pigmentosum) human cells by employing a novel technique of local ultraviolet irradiation combined with fluorescent antibody labeling. The damage-recognition complex XPC-HR23B appeared to be essential for the recruitment of all subsequent NER factors in the preincision complex, including transcription repair factor TFIIH (see 189972). Volker et al. (2001) found that XPA associates relatively late, is required for anchoring of ERCC1 (126380)-XPF (133520), and may be essential for activation of the endonuclease activity of XPG (133530). These findings identified XPC as the earliest known NER factor in the reaction mechanism, gave insight into the order of subsequent NER components, provided evidence for a dual role of XPA, and supported a concept of sequential assembly of repair proteins at the site of damage rather than a preassembled repairosome.

Shimizu et al. (2003) presented evidence that human and mouse XPC-HR23B complexes interact with thymine DNA glycosylase (TDG; 601423), which initiates base excision repair of G/T mismatches. XPC-HR23B stimulated TDG activity by promoting the release of TDG following the excision of mismatched T bases. In the presence of apurinic/apyrimidinic endonuclease (APEX; 107748), XPC-HR23B had an additive effect on TDG turnover without significantly inhibiting the subsequent action of APEX. Shimizu et al. (2003) concluded that the XPC-HR23B complex contributes to the suppression of spontaneous mutations and that compromised function in XPC patients may promote carcinogenesis.

In studies of the contribution of the XPC gene to DNA repair, Emmert et al. (2000) found that the gene leads to selective repair of cyclobutane pyrimidine dimers (CPD) rather than 6-4 photoproducts (6-4PP). Increasing XPC gene expression in vivo led to selective repair of CPD in the global genome. Undetectable XPC protein was associated with no repair of CPD or 6-4PP, detectable but subnormal XPC protein levels reconstituted CPD but not 6-4PP repair, and normal XPC protein levels fully reconstituted both CPD and 6-4PP repair.

Using sequence profile analysis, Anantharaman et al. (2001) showed that RAD4/XPC proteins contain the ancient transglutaminase fold and are specifically related to the peptide-N-glycanases (PNGases) which remove glycans from glycoproteins during their degradation (Suzuki et al., 2000). The PNGases retain the catalytic triad that is typical of this fold and are predicted to have a reaction mechanism similar to that involved in transglutamination. In contrast, the RAD4/XPC proteins are predicted to be inactive and are likely to possess only the protein interaction function in DNA repair. These proteins also contain a long, low-complexity insert in the globular transglutaminase domain. Anantharaman et al. (2001) hypothesized that the RAD4/XPC proteins, along with other inactive transglutaminase-fold proteins, represent a case of functional reassignment of an ancient domain following the loss of the ancestral enzymatic activity.

Using HeLa and U2OS human cell lines, Balbo Pogliano et al. (2017) found that the DNA damage sensor and DNA-binding protein DDB2 (600811) recruited ASH1L (607999) to CPD lesions caused by UV irradiation. In turn, ASH1L trimethylated histone H3 (see 602810) lys4 (H3K4me3), which promoted stable docking of XPC at nucleosomes near CPD sites and initiation of NER activity. Knockdown of either DDB2 or ASH1L via short interfering RNA abrogated UV-dependent increase in H3K4me3, caused dysregulated XPC recruitment into NER complexes at nucleosomes, and delayed CPD excision and DNA repair. XPC interacted preferentially with nucleosome particles containing H3K4me3 and did not require DNA. Mutation analysis revealed that asp748 in the beta-turn motif of XPC contributed to its association with core histones of nucleosomes and that this interaction determined the efficiency of CPD excision.


Biochemical Features

Crystal Structure

Min and Pavletich (2007) presented the crystal structure of the yeast XPC ortholog Rad4 bound to DNA containing a cyclobutane pyrimidine dimer (CPD) lesion. The structure showed that Rad4 inserts a beta-hairpin through the DNA duplex, causing the 2 damaged basepairs to flip out of the double helix. The expelled nucleotides of the undamaged strand are recognized by Rad4, whereas the 2 CPD-linked nucleotides become disordered. Min and Pavletich (2007) concluded that the lesions recognized by Rad4/XPC thermodynamically destabilize the Watson-Crick double helix in a manner that facilitates the flipping out of 2 basepairs.


Molecular Genetics

Li et al. (1993) identified changes in the XPC gene (see, e.g., 613208.0001-613208.0004) in 5 XPC cell lines. In 4 of them, Northern blot analysis of RNAs demonstrated subnormal levels of the XPC transcript, whereas the fifth exhibited a near normal level. Four of the 5 mutations resulted in a truncated protein, and there was a correlation between the degree to which the protein was truncated and the repair defect at the cellular level.

In affected members of 2 unrelated but consanguineous Turkish families with XPC, Khan et al. (2004) identified 2 different splice site mutations in the XPC gene (613208.0008 and 613208.0009), respectively. RT-PCR of cells from the severely affected patients showed a short mRNA band and no detectable wildtype band. In contrast, cells from the more mildly affected patients had an mRNA band of shorter size and 1 of normal size.

Cleaver et al. (1999) reviewed mutations in the XPC gene.

In affected members of 14 Tunisian families with XPC, Ben Rekaya et al. (2009) identified the same homozygous 2-bp deletion (1744delTG; 613208.0010) in the XPC gene. Haplotype analysis indicated a founder effect.


Animal Model

Sands et al. (1995) generated XPC-deficient mice by 'knockout' of the mouse homolog of the human XPC gene using embryonic stem cell technology. Mice homozygous for mutant alleles were viable and did not exhibit an increased susceptibility to spontaneous tumor generation at 1 year of age. However, they were found to be highly susceptible to ultraviolet-induced carcinogenesis compared to mice heterozygous for the mutant allele and to wildtype controls. Homozygous mutant mice also displayed a spectrum of ultraviolet exposure-related pathologic skin and eye changes consistent with those found in the human disease xeroderma pigmentosum group C. The deficient mice showed marked hyperplasia of the epidermis with focal areas of hyperkeratosis in varying degrees of dysplasia, acantholysis, and/or dyskeratosis, similar to the human lesions known as actinic or solar keratosis. Changes in the eye included severe keratitis and corneal ulceration.

Cheo et al. (1999) studied the XPC -/- mouse to determine whether there is a predisposition to cancers in noncutaneous tissues associated with exposure to environmental carcinogens. They observed a significantly higher incidence of chemically-induced liver and lung tumors in these mice, compared with normal and heterozygous littermates, using 2-acetylaminofluorene and NOH-2-acetylaminofluorene. In addition, the progression of liver tumors in the mice homozygous mutant for XPC and heterozygous mutant for p53 was accelerated, compared with the homozygous mutant XPC mice and homozygous wildtype p53 animals. They also demonstrated a higher incidence of spontaneous testicular tumors in XPC -/- p53 -/- double mutant mice, compared with mice homozygous for mutation only at the p53 locus.

Hollander et al. (2005) found that 100% of Xpc -/- mice developed multiple spontaneous lung tumors with a minority progressing to nonsmall cell lung adenocarcinoma, occasionally with metastasis to adjacent lymph nodes.


ALLELIC VARIANTS ( 10 Selected Examples):

.0001 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, PRO218HIS
  
RCV000000277...

In XPC (278720) cell line XP1MI, Li et al. (1993) identified a mutation in the XPC gene, resulting in a pro218-to-his (P218H) substitution. The finding suggested that the cell line was either homozygous or hemizygous for this mutation. The XP1MI cell line was the most UV-sensitive of 5 cell lines analyzed by Li et al. (1993). Furthermore, the patient demonstrated XP-associated neurologic abnormalities, a rarity in group C.


.0002 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 83-BP INS, NT462
   RCV000000278

In XPC (278720) cell line XP3BE-L3, Li et al. (1993) identified an 83-bp insertion beginning at position 462 in the XPC cDNA, predicted to result in premature termination.


.0003 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 3-BP INS, GGT, CODON 580 AND LYS822GLN
  
RCV000000279...

In XPC (278720) cell line XP8BE-L1, Li et al. (1993) identified 2 mutations in the XPC gene: 1 was a 3-bp insertion (GGT) that resulted in the insertion of a valine residue after val580, and the other was a point mutation that created a nonconservative amino acid change near the carboxyl terminus of the protein (lys822-to-gln; K822Q). The mutation was either homo- or hemizygous. It could not be determined whether only 1 or both of these mutations was responsible for the observed repair deficiency. Of the 5 cell lines examined, XP8BE-L1 was the least sensitive to UV irradiation and exhibited a near-normal level of XPC mRNA. Clinically, the patient XP8BE was diagnosed with XP at birth and was rigorously protected from sunlight from that time; as of 13 years of age, the patient had not exhibited any malignant neoplasms. However, an older brother with XP began to develop tumors by age 13. Like the vast majority of XPC patients, this patient did not exhibit neurologic complications.


.0004 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 2-BP DEL, 1132AA
  
RCV000000280

In XPC (278720) cell line XP1BE-L1, Li et al. (1993) identified a 2-bp deletion (1132delA) in the XPC gene, predicted to result in premature termination of the protein by a new stop codon 15 nucleotides downstream. The deletion appeared to be either homozygous or hemizygous.


.0005 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, IVS9DS, T-G, +2
  
RCV000000281

In a 4-year-old boy of Korean ancestry who had xeroderma pigmentosum type C (XPC; 278720) characterized by sun sensitivity and multiple cutaneous neoplasms, Khan et al. (1998) found a T-to-G transversion at the splice donor site of exon 9 of the XPC gene. The patient had some unusual neurologic features, including the inability to speak, hyperactivity, and autistic features. There was a markedly decreased level of XPC mRNA, and the splice site mutation was found to generate 3 different isoforms: 1 with loss of exon 9, resulting in premature termination; another with an insertion of exons 9a and 9b; and a third with a deletion of exon 9 and insertion of exon 9a. The exon 9a insertion was located in intron 9 and was flanked by strong splice donor and acceptor sequences. Analysis of the patient's blood showed persistently low levels of glycine (68 microM; normal = 125-318 microM). Normal glycine levels were maintained with oral glycine supplements, and the patient's hyperactivity diminished.


.0006 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 2-BP DEL, 669AT
  
RCV000000282...

In 2 Israeli sibs with severe xeroderma pigmentosum type C (XPC; 278720), Slor et al. (2000) identified a homozygous 2-bp deletion (669delAT) in exon 5 of the XPC gene, predicted to result in a truncated protein. Cultured skin fibroblasts from both patients showed reductions in postultraviolet survival (11% of normal), unscheduled DNA synthesis (10% of normal), global genome DNA repair (15% of normal), and plasmid host cell reactivation (5% of normal). Transcription-coupled DNA repair was normal, however. Northern blot analysis revealed greatly reduced xeroderma pigmentosum complementation group C mRNA. Sun protection delayed the onset of skin cancer and prolonged life in the second sib.


.0007 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, ARG579TER
  
RCV000000283...

In 2 severely affected Turkish sibs with xeroderma pigmentosum type C (XPC; 278720), a boy with multiple skin cancers who died at age 10 (XP67TMA), and an 8-year-old girl who began developing skin cancer before 3 years of age (XP68TMA), Gozukara et al. (2001) identified a 1840C-T transition in exon 8 of the XPC gene, resulting in an arg579-to-ter (R579X) substitution. This change would lead to a truncation of the XPC protein at amino acid 579 rather than at its full length of 940 amino acids. Restriction fragment length polymorphism (RFLP) analysis of XPC exon 8 DNA showed that both affected children were homozygous and both parents were heterozygous for the mutation, consistent with a history of consanguinity in the family. This mutation was reported by Chavanne et al. (2000) in an Italian patient (XP10PV) from Bologna who developed skin cancers beginning at age 4 years. She had ocular lesions including tumors and died at age 15 years. The parents were not known to be consanguineous. Gozukara et al. (2001) studied 19 microsatellite markers flanking the XPC gene on chromosome 3; their results suggested that the XPC allele passed between Italy and Turkey approximately 300 to 500 years ago. The R579X XPC allele is thus associated with severe clinical disease with multiple skin cancers and early death.


.0008 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, IVS3AS, T-A, -9
  
RCV000000284

In 2 sibs with xeroderma pigmentosum type C (XPC; 278720) and multiple skin cancers from a consanguineous Turkish family, Khan et al. (2004) identified homozygosity for a -9T-A transversion in intron 3 of the XPC gene. The mutation was located in a splice lariat branchpoint sequence. PCR analysis of fibroblast cells detected an XPC mRNA isoform with deletion of exon 4 that had no DNA repair activity in a post-UV host cell reactivation assay. The 20-year-old male and his 16-year-old sister were severely affected. They developed skin lesions at 3 years of age. Both had cutaneous atrophy, telangiectasia, actinic keratoses, and multiple skin cancers including squamous cell carcinomas, basal cell carcinomas, and melanomas.


.0009 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, IVS3AS, A-G, -24
  
RCV000000285...

In 3 sibs with mild xeroderma pigmentosum type C (XPC; 278720) from a consanguineous Turkish family, Khan et al. (2004) identified homozygosity for a -24A-G transition in intron 3 of the XPC gene. Cells from the affected sibs produced 3 to 5% normal XPC message and had a higher level of post-UV host cell reactivation than cells from the severely affected sibs harboring the -9T-A mutation (613208.0008). The authors concluded that a small amount of normal XPC mRNA can provide partial protection against skin cancers. The 3 sisters, aged 20, 18, and 11 years, were mildly affected. Skin lesions began at age 3 to 5 years. They had freckling but no skin atrophy, telangiectasia, or actinic keratoses. The oldest sister had a squamous cell carcinoma excised from her face at age 12 years. The other sisters did not have skin cancer.


.0010 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 2-BP DEL, 1744TG
  
RCV000000286...

In affected members of 14 Tunisian families with severe xeroderma pigmentosum type C (XPC; 278720), Ben Rekaya et al. (2009) identified a homozygous 2-bp deletion (1744delTG) in exon 9 of the XPC gene, resulting in a frameshift and premature termination (fsTer572). Clinical features included photophobia and skin tumors, including basal cell carcinoma, squamous cell carcinoma, and malignant melanoma. None of the patients had neurologic abnormalities. Haplotype analysis indicated a founder effect.


See Also:

REFERENCES

  1. Anantharaman, V., Koonin, E. V., Aravind, L. Peptide-N-glycanases and DNA repair proteins, Xp-C/Rad4, are, respectively, active and inactivated enzymes sharing a common transglutaminase fold. Hum. Molec. Genet. 10: 1627-1630, 2001. [PubMed: 11487565, related citations] [Full Text]

  2. Balbo Pogliano, C. B., Gatti, M., Ruthemann, P., Garajova, Z., Penengo, L., Naegeli, H. ASH1L histone methyltransferase regulates the handoff between damage recognition factors in global-genome nucleotide excision repair. Nature Commun. 8: 1333, 2017. Note: Electronic Article. [PubMed: 29109511, images, related citations] [Full Text]

  3. Ben Rekaya, M., Messaoud, O., Talmoudi, F., Nouira, S., Ouragini, H., Amouri, A., Boussen, H., Boubaker, S., Mokni, M., Mokthar, I., Abdelhak, S., Zghal, M. High frequency of the V548A fs X572 XPC mutation in Tunisia: implication for molecular diagnosis. J. Hum. Genet. 54: 426-429, 2009. [PubMed: 19478817, related citations] [Full Text]

  4. Chavanne, F., Broughton, B. C., Pietra, D., Nardo, T., Browitt, A., Lehmann, A. R., Stefanini, M. Mutations in the XPC gene in families with xeroderma pigmentosum and consequences at the cell, protein, and transcript levels. Cancer Res. 60: 1974-1982, 2000. [PubMed: 10766188, related citations]

  5. Cheo, D. L., Burns, D. K., Meira, L. B., Houle, J. F., Friedberg, E. C. Mutational inactivation of the xeroderma pigmentosum group C gene confers predisposition to 2-acetylaminofluorene-induced liver and lung cancer and to spontaneous testicular cancer in Trp53 -/- mice. Cancer Res. 59: 771-775, 1999. [PubMed: 10029060, related citations]

  6. Cleaver, J. E., Thompson, L. H., Richardson, A. S., States, J. C. A summary of mutations in the UV-sensitive disorders: xeroderma pigmentosum, Cockayne syndrome, and trichothiodystrophy. Hum. Mutat. 14: 9-22, 1999. [PubMed: 10447254, related citations] [Full Text]

  7. Cleaver, J. E. DNA repair in human xeroderma pigmentosum group C cells involves a different distribution of damaged sites in confluent and growing cells. Nucleic Acids Res. 14: 8155-8165, 1986. [PubMed: 3774554, related citations] [Full Text]

  8. Emmert, S., Kobayashi, N., Khan, S. G., Kraemer, K. H. The xeroderma pigmentosum group C gene leads to selective repair of cyclobutane pyrimidine dimers rather than 6-4 photoproducts. Proc. Nat. Acad. Sci. 97: 2151-2156, 2000. [PubMed: 10681431, images, related citations] [Full Text]

  9. Gozukara, E. M., Khan, S. G., Metin, A., Emmert, S., Busch, D. B., Shahlavi, T., Coleman, D. M., Miller, M., Chinsomboon, N., Stefanini, M., Kraemer, K. H. A stop codon in xeroderma pigmentosum group C families in Turkey and Italy: molecular genetic evidence for a common ancestor. J. Invest. Derm. 117: 197-204, 2001. [PubMed: 11511294, related citations] [Full Text]

  10. Hollander, M. C., Philburn, R. T., Patterson, A. D., Velasco-Miguel, S., Friedberg, E. C., Linnoila, R. I., Fornace, A. J., Jr. Deletion of XPC leads to lung tumors in mice and is associated with early events in human lung carcinogenesis. Proc. Nat. Acad. Sci. 102: 13200-13205, 2005. [PubMed: 16141330, images, related citations] [Full Text]

  11. Khan, S. G., Levy, H. L., Legerski, R., Quackenbush, E., Reardon, J. T., Emmert, S., Sancar, A., Li, L., Schneider, T. D., Cleaver, J. E., Kraemer, K. H. Xeroderma pigmentosum group C splice mutation associated with autism and hypoglycinemia. J. Invest. Derm. 111: 791-796, 1998. Note: Erratum: J. Invest. Derm. 112: 402 only, 1999. [PubMed: 9804340, related citations] [Full Text]

  12. Khan, S. G., Metin, A., Gozukara, E., Inui, H., Shahlavi, T., Muniz-Medina, V., Baker, C. C., Ueda, T., Aiken, J. R., Schneider, T. D., Kraemer, K. H. Two essential splice lariat branchpoint sequences in one intron in a xeroderma pigmentosum DNA repair gene: mutations result in reduced XPC mRNA levels that correlate with cancer risk. Hum. Molec. Genet. 13: 343-352, 2004. [PubMed: 14662655, related citations] [Full Text]

  13. Lalley, P. A., Diaz, J. A., Francis, A. A., Dunn, W. C., Regan, J. D. The expression and chromosomal assignments of genes required for repair of UV-induced DNA damage. Cytogenet. Cell Genet. 37: 516 only, 1984.

  14. Legerski, R. J., Liu, P., Li, L., Peterson, C. A., Zhao, Y., Leach, R. J., Naylor, S. L., Siciliano, M. J. Assignment of xeroderma pigmentosum group C (XPC) gene to chromosome 3p25. Genomics 21: 266-269, 1994. [PubMed: 8088800, related citations] [Full Text]

  15. Legerski, R., Peterson, C. Expression cloning of a human DNA repair gene involved in xeroderma pigmentosum group C. Nature 359: 70-73, 1992. Note: Erratum: Nature 360: 610 only, 1992. [PubMed: 1522891, related citations] [Full Text]

  16. Li, L., Bales, E. S., Peterson, C. A., Legerski, R. J. Characterization of molecular defects in xeroderma pigmentosum group C. Nature Genet. 5: 413-417, 1993. [PubMed: 8298653, related citations] [Full Text]

  17. Masutani, C., Sugasawa, K., Yanagisawa, J., Sonoyama, T., Ui, M., Enomoto, T., Takio, K., Tanaka, K., van der Spek, P., Bootsma, D., Hoeijmakers, J. H. J., Hanaoka, F. Purification and cloning of a nucleotide excision repair complex involving the xeroderma pigmentosum group C protein and a human homologue of yeast RAD23. EMBO J. 13: 1831-1843, 1994. [PubMed: 8168482, related citations] [Full Text]

  18. Min, J.-H., Pavletich, N. P. Recognition of DNA damage by the Rad4 nucleotide excision repair protein. Nature 449: 570-575, 2007. [PubMed: 17882165, related citations] [Full Text]

  19. Peterson, C., Legerski, R. High-frequency transformation of human repair-deficient cell lines by an Epstein-Barr virus-based cDNA expression vector. Gene 107: 279-284, 1991. [PubMed: 1660831, related citations] [Full Text]

  20. Sands, A. T., Abuin, A., Sanchez, A., Conti, C. J., Bradley, A. High susceptibility to ultraviolet-induced carcinogenesis in mice lacking XPC. Nature 377: 162-165, 1995. [PubMed: 7675084, related citations] [Full Text]

  21. Shimizu, Y., Iwai, S., Hanaoka, F., Sugasawa, K. Xeroderma pigmentosum group C protein interacts physically and functionally with thymine DNA glycosylase. EMBO J. 22: 164-173, 2003. [PubMed: 12505994, images, related citations] [Full Text]

  22. Slor, H., Batko, S., Khan, S. G., Sobe, T., Emmert, S., Khadavi, A., Frumkin, A., Busch, D. B., Albert, R. B., Kraemer, K. H. Clinical, cellular, and molecular features of an Israeli xeroderma pigmentosum family with a frameshift mutation in the XPC gene: sun protection prolongs life. J. Invest. Derm. 115: 974-980, 2000. [PubMed: 11121128, related citations] [Full Text]

  23. Sugasawa, K., Ng, J. M. Y., Masutani, C., Iwai, S., van der Spek, P. J., Eker, A. P. M., Hanaoka, F., Bootsma, D., Hoeijmakers, J. H. J. Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair. Molec. Cell 2: 223-232, 1998. [PubMed: 9734359, related citations] [Full Text]

  24. Suzuki, T., Park, H., Hollingsworth, N. M., Sternglanz, R., Lennarz, W. L. PNG1, a yeast gene encoding a highly conserved peptide:N-glycanase. J. Cell Biol. 149: 1039-1052, 2000. [PubMed: 10831608, images, related citations] [Full Text]

  25. Teitz, T., Naiman, T., Avissar, S. S., Bar, S., Okayama, H., Canaani, D. Complementation of the UV-sensitive phenotype of a xeroderma pigmentosum human cell line by transfection with a cDNA clone library. Proc. Nat. Acad. Sci. 84: 8801-8804, 1987. [PubMed: 3480511, related citations] [Full Text]

  26. van der Spek, P. J., Visser, C. E., Hanaoka, F., Smit, B., Hagemeijer, A., Bootsma, D., Hoeijmakers, J. H. J. Cloning, comparative mapping, and RNA expression of the mouse homologues of the Saccharomyces cerevisiae nucleotide excision repair gene RAD23. Genomics 31: 20-27, 1996. [PubMed: 8808275, related citations] [Full Text]

  27. Volker, M., Mone, M. J., Karmakar, P., van Hoffen, A., Schul, W., Vermeulen, W., Hoeijmakers, J. H. J., van Driel, R., van Zeeland, A. A., Mullenders, L. H. F. Sequential assembly of the nucleotide excision repair factors in vivo. Molec. Cell 8: 213-224, 2001. [PubMed: 11511374, related citations] [Full Text]


Contributors:
Patricia A. Hartz - updated : 02/08/2018
Creation Date:
Cassandra L. Kniffin : 1/7/2010
carol : 01/03/2025
carol : 08/07/2020
carol : 02/09/2018
mgross : 02/08/2018
carol : 06/03/2014
carol : 9/12/2013
carol : 3/12/2013
terry : 8/9/2012
carol : 12/3/2010
terry : 11/5/2010
carol : 1/12/2010
ckniffin : 1/8/2010

* 613208

XPC COMPLEX SUBUNIT, DNA DAMAGE RECOGNITION AND REPAIR FACTOR; XPC


Alternative titles; symbols

XPC GENE
XPCC GENE
RAD4, YEAST, HOMOLOG OF; RAD4


HGNC Approved Gene Symbol: XPC

SNOMEDCT: 25784009;  


Cytogenetic location: 3p25.1   Genomic coordinates (GRCh38) : 3:14,145,147-14,178,601 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
3p25.1 Xeroderma pigmentosum, group C 278720 Autosomal recessive 3

TEXT

Description

The XPC gene encodes a protein that functions as a damage detector involved in the first step of global genome nucleotide excision DNA repair (Sugasawa et al. (1998); Volker et al., 2001).


Cloning and Expression

Teitz et al. (1987) were able to correct UV sensitivity in a xeroderma pigmentosum group C (XPC; 278720) cell line by transfection with a human cDNA library derived from fibroblasts. UV resistance appeared to be closely linked to resistance to G418, an antibiotic. The authors suggested the gene symbol XPCC (for xeroderma pigmentosum group C-complementing).

Peterson and Legerski (1991) devised a simple, highly efficient cDNA expression system for use in human cells. Legerski and Peterson (1992) used this system to isolate a cDNA clone that restored the ultraviolet sensitivity and unscheduled DNA synthesis of XPC cells to normal levels. The cloned XPC gene was found to encode a highly hydrophilic protein composed of a predicted 823 amino acids and sharing limited homology with the product of the yeast DNA repair gene RAD4. The XPC transcript was undetectable by Northern blotting in most XPC cell lines examined.


Mapping

Mouse cells repair UV-induced damage at 5 to 10% of the magnitude of human cells making it possible to distinguish quantitatively human and mouse DNA repair components in cell hybrids. When Lalley et al. (1984) compared the ability to repair UV-induced DNA damage to the segregation of human chromosomes in the mouse-human hybrid cells, they found a strong correlation with human chromosome 3, indicating that a gene or a cluster of genes required for DNA repair is located on this human chromosome.

Legerski et al. (1994) mapped the XPC gene to chromosome 3p25 by somatic cell hybridization. The mouse homolog of XPC maps to chromosome 6 (van der Spek et al., 1996).


Gene Function

Masutani et al. (1994) reported the purification to homogeneity and subsequent cDNA cloning of a repair complex by in vitro complementation of the XPC defect in a cell-free repair system containing UV-damaged SV40 minichromosomes. The complex had a high affinity for single-stranded DNA and consisted of 2 tightly associated proteins of 125 and 58 kD. The 125-kD subunit was an N-terminally extended version of the XPC gene product, which is thought to represent the human homolog of the RAD4 nucleotide excision repair (NER) gene of Saccharomyces cerevisiae. The 58-kD species turned out to be a human homolog of yeast RAD23. Unexpectedly, a second human counterpart of RAD23 was identified. Masutani et al. (1994) referred to the 2 as HHR23A (600061) and HHR23B (600062). The 2 RAD23 homologs were expressed in the same cells. However, only the HHR23B protein was found in a complex with p125/XPC. Masutani et al. (1994) pointed out that no human mutant defective in HHR23A had been identified.

The XPC-HHR23B complex is specifically involved in global genome but not transcription-coupled NER. Using a DNA damage recognition-competition assay, Sugasawa et al. (1998) identified XPC-HHR23B as the earliest damage detector to initiate NER; it acts before the known damage-binding protein XPA (611153). Coimmunoprecipitation and DNase I footprinting showed that XPC-HHR23B binds to a variety of NER lesions. This provides a plausible explanation for the extreme damage specificity exhibited by global genome repair.

Volker et al. (2001) described the assembly of the NER complex in normal and repair-deficient (xeroderma pigmentosum) human cells by employing a novel technique of local ultraviolet irradiation combined with fluorescent antibody labeling. The damage-recognition complex XPC-HR23B appeared to be essential for the recruitment of all subsequent NER factors in the preincision complex, including transcription repair factor TFIIH (see 189972). Volker et al. (2001) found that XPA associates relatively late, is required for anchoring of ERCC1 (126380)-XPF (133520), and may be essential for activation of the endonuclease activity of XPG (133530). These findings identified XPC as the earliest known NER factor in the reaction mechanism, gave insight into the order of subsequent NER components, provided evidence for a dual role of XPA, and supported a concept of sequential assembly of repair proteins at the site of damage rather than a preassembled repairosome.

Shimizu et al. (2003) presented evidence that human and mouse XPC-HR23B complexes interact with thymine DNA glycosylase (TDG; 601423), which initiates base excision repair of G/T mismatches. XPC-HR23B stimulated TDG activity by promoting the release of TDG following the excision of mismatched T bases. In the presence of apurinic/apyrimidinic endonuclease (APEX; 107748), XPC-HR23B had an additive effect on TDG turnover without significantly inhibiting the subsequent action of APEX. Shimizu et al. (2003) concluded that the XPC-HR23B complex contributes to the suppression of spontaneous mutations and that compromised function in XPC patients may promote carcinogenesis.

In studies of the contribution of the XPC gene to DNA repair, Emmert et al. (2000) found that the gene leads to selective repair of cyclobutane pyrimidine dimers (CPD) rather than 6-4 photoproducts (6-4PP). Increasing XPC gene expression in vivo led to selective repair of CPD in the global genome. Undetectable XPC protein was associated with no repair of CPD or 6-4PP, detectable but subnormal XPC protein levels reconstituted CPD but not 6-4PP repair, and normal XPC protein levels fully reconstituted both CPD and 6-4PP repair.

Using sequence profile analysis, Anantharaman et al. (2001) showed that RAD4/XPC proteins contain the ancient transglutaminase fold and are specifically related to the peptide-N-glycanases (PNGases) which remove glycans from glycoproteins during their degradation (Suzuki et al., 2000). The PNGases retain the catalytic triad that is typical of this fold and are predicted to have a reaction mechanism similar to that involved in transglutamination. In contrast, the RAD4/XPC proteins are predicted to be inactive and are likely to possess only the protein interaction function in DNA repair. These proteins also contain a long, low-complexity insert in the globular transglutaminase domain. Anantharaman et al. (2001) hypothesized that the RAD4/XPC proteins, along with other inactive transglutaminase-fold proteins, represent a case of functional reassignment of an ancient domain following the loss of the ancestral enzymatic activity.

Using HeLa and U2OS human cell lines, Balbo Pogliano et al. (2017) found that the DNA damage sensor and DNA-binding protein DDB2 (600811) recruited ASH1L (607999) to CPD lesions caused by UV irradiation. In turn, ASH1L trimethylated histone H3 (see 602810) lys4 (H3K4me3), which promoted stable docking of XPC at nucleosomes near CPD sites and initiation of NER activity. Knockdown of either DDB2 or ASH1L via short interfering RNA abrogated UV-dependent increase in H3K4me3, caused dysregulated XPC recruitment into NER complexes at nucleosomes, and delayed CPD excision and DNA repair. XPC interacted preferentially with nucleosome particles containing H3K4me3 and did not require DNA. Mutation analysis revealed that asp748 in the beta-turn motif of XPC contributed to its association with core histones of nucleosomes and that this interaction determined the efficiency of CPD excision.


Biochemical Features

Crystal Structure

Min and Pavletich (2007) presented the crystal structure of the yeast XPC ortholog Rad4 bound to DNA containing a cyclobutane pyrimidine dimer (CPD) lesion. The structure showed that Rad4 inserts a beta-hairpin through the DNA duplex, causing the 2 damaged basepairs to flip out of the double helix. The expelled nucleotides of the undamaged strand are recognized by Rad4, whereas the 2 CPD-linked nucleotides become disordered. Min and Pavletich (2007) concluded that the lesions recognized by Rad4/XPC thermodynamically destabilize the Watson-Crick double helix in a manner that facilitates the flipping out of 2 basepairs.


Molecular Genetics

Li et al. (1993) identified changes in the XPC gene (see, e.g., 613208.0001-613208.0004) in 5 XPC cell lines. In 4 of them, Northern blot analysis of RNAs demonstrated subnormal levels of the XPC transcript, whereas the fifth exhibited a near normal level. Four of the 5 mutations resulted in a truncated protein, and there was a correlation between the degree to which the protein was truncated and the repair defect at the cellular level.

In affected members of 2 unrelated but consanguineous Turkish families with XPC, Khan et al. (2004) identified 2 different splice site mutations in the XPC gene (613208.0008 and 613208.0009), respectively. RT-PCR of cells from the severely affected patients showed a short mRNA band and no detectable wildtype band. In contrast, cells from the more mildly affected patients had an mRNA band of shorter size and 1 of normal size.

Cleaver et al. (1999) reviewed mutations in the XPC gene.

In affected members of 14 Tunisian families with XPC, Ben Rekaya et al. (2009) identified the same homozygous 2-bp deletion (1744delTG; 613208.0010) in the XPC gene. Haplotype analysis indicated a founder effect.


Animal Model

Sands et al. (1995) generated XPC-deficient mice by 'knockout' of the mouse homolog of the human XPC gene using embryonic stem cell technology. Mice homozygous for mutant alleles were viable and did not exhibit an increased susceptibility to spontaneous tumor generation at 1 year of age. However, they were found to be highly susceptible to ultraviolet-induced carcinogenesis compared to mice heterozygous for the mutant allele and to wildtype controls. Homozygous mutant mice also displayed a spectrum of ultraviolet exposure-related pathologic skin and eye changes consistent with those found in the human disease xeroderma pigmentosum group C. The deficient mice showed marked hyperplasia of the epidermis with focal areas of hyperkeratosis in varying degrees of dysplasia, acantholysis, and/or dyskeratosis, similar to the human lesions known as actinic or solar keratosis. Changes in the eye included severe keratitis and corneal ulceration.

Cheo et al. (1999) studied the XPC -/- mouse to determine whether there is a predisposition to cancers in noncutaneous tissues associated with exposure to environmental carcinogens. They observed a significantly higher incidence of chemically-induced liver and lung tumors in these mice, compared with normal and heterozygous littermates, using 2-acetylaminofluorene and NOH-2-acetylaminofluorene. In addition, the progression of liver tumors in the mice homozygous mutant for XPC and heterozygous mutant for p53 was accelerated, compared with the homozygous mutant XPC mice and homozygous wildtype p53 animals. They also demonstrated a higher incidence of spontaneous testicular tumors in XPC -/- p53 -/- double mutant mice, compared with mice homozygous for mutation only at the p53 locus.

Hollander et al. (2005) found that 100% of Xpc -/- mice developed multiple spontaneous lung tumors with a minority progressing to nonsmall cell lung adenocarcinoma, occasionally with metastasis to adjacent lymph nodes.


ALLELIC VARIANTS 10 Selected Examples):

.0001   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, PRO218HIS
SNP: rs74737358, gnomAD: rs74737358, ClinVar: RCV000000277, RCV000122346, RCV000885048, RCV002257356, RCV003904788

In XPC (278720) cell line XP1MI, Li et al. (1993) identified a mutation in the XPC gene, resulting in a pro218-to-his (P218H) substitution. The finding suggested that the cell line was either homozygous or hemizygous for this mutation. The XP1MI cell line was the most UV-sensitive of 5 cell lines analyzed by Li et al. (1993). Furthermore, the patient demonstrated XP-associated neurologic abnormalities, a rarity in group C.


.0002   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 83-BP INS, NT462
ClinVar: RCV000000278

In XPC (278720) cell line XP3BE-L3, Li et al. (1993) identified an 83-bp insertion beginning at position 462 in the XPC cDNA, predicted to result in premature termination.


.0003   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 3-BP INS, GGT, CODON 580 AND LYS822GLN
SNP: rs1423935768, gnomAD: rs1423935768, ClinVar: RCV000000279, RCV000669456, RCV004526003

In XPC (278720) cell line XP8BE-L1, Li et al. (1993) identified 2 mutations in the XPC gene: 1 was a 3-bp insertion (GGT) that resulted in the insertion of a valine residue after val580, and the other was a point mutation that created a nonconservative amino acid change near the carboxyl terminus of the protein (lys822-to-gln; K822Q). The mutation was either homo- or hemizygous. It could not be determined whether only 1 or both of these mutations was responsible for the observed repair deficiency. Of the 5 cell lines examined, XP8BE-L1 was the least sensitive to UV irradiation and exhibited a near-normal level of XPC mRNA. Clinically, the patient XP8BE was diagnosed with XP at birth and was rigorously protected from sunlight from that time; as of 13 years of age, the patient had not exhibited any malignant neoplasms. However, an older brother with XP began to develop tumors by age 13. Like the vast majority of XPC patients, this patient did not exhibit neurologic complications.


.0004   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 2-BP DEL, 1132AA
SNP: rs794729654, ClinVar: RCV000000280

In XPC (278720) cell line XP1BE-L1, Li et al. (1993) identified a 2-bp deletion (1132delA) in the XPC gene, predicted to result in premature termination of the protein by a new stop codon 15 nucleotides downstream. The deletion appeared to be either homozygous or hemizygous.


.0005   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, IVS9DS, T-G, +2
SNP: rs794729655, ClinVar: RCV000000281

In a 4-year-old boy of Korean ancestry who had xeroderma pigmentosum type C (XPC; 278720) characterized by sun sensitivity and multiple cutaneous neoplasms, Khan et al. (1998) found a T-to-G transversion at the splice donor site of exon 9 of the XPC gene. The patient had some unusual neurologic features, including the inability to speak, hyperactivity, and autistic features. There was a markedly decreased level of XPC mRNA, and the splice site mutation was found to generate 3 different isoforms: 1 with loss of exon 9, resulting in premature termination; another with an insertion of exons 9a and 9b; and a third with a deletion of exon 9 and insertion of exon 9a. The exon 9a insertion was located in intron 9 and was flanked by strong splice donor and acceptor sequences. Analysis of the patient's blood showed persistently low levels of glycine (68 microM; normal = 125-318 microM). Normal glycine levels were maintained with oral glycine supplements, and the patient's hyperactivity diminished.


.0006   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 2-BP DEL, 669AT
SNP: rs752088918, gnomAD: rs752088918, ClinVar: RCV000000282, RCV000589161, RCV001062453

In 2 Israeli sibs with severe xeroderma pigmentosum type C (XPC; 278720), Slor et al. (2000) identified a homozygous 2-bp deletion (669delAT) in exon 5 of the XPC gene, predicted to result in a truncated protein. Cultured skin fibroblasts from both patients showed reductions in postultraviolet survival (11% of normal), unscheduled DNA synthesis (10% of normal), global genome DNA repair (15% of normal), and plasmid host cell reactivation (5% of normal). Transcription-coupled DNA repair was normal, however. Northern blot analysis revealed greatly reduced xeroderma pigmentosum complementation group C mRNA. Sun protection delayed the onset of skin cancer and prolonged life in the second sib.


.0007   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, ARG579TER
SNP: rs121965088, gnomAD: rs121965088, ClinVar: RCV000000283, RCV001260295, RCV001851508

In 2 severely affected Turkish sibs with xeroderma pigmentosum type C (XPC; 278720), a boy with multiple skin cancers who died at age 10 (XP67TMA), and an 8-year-old girl who began developing skin cancer before 3 years of age (XP68TMA), Gozukara et al. (2001) identified a 1840C-T transition in exon 8 of the XPC gene, resulting in an arg579-to-ter (R579X) substitution. This change would lead to a truncation of the XPC protein at amino acid 579 rather than at its full length of 940 amino acids. Restriction fragment length polymorphism (RFLP) analysis of XPC exon 8 DNA showed that both affected children were homozygous and both parents were heterozygous for the mutation, consistent with a history of consanguinity in the family. This mutation was reported by Chavanne et al. (2000) in an Italian patient (XP10PV) from Bologna who developed skin cancers beginning at age 4 years. She had ocular lesions including tumors and died at age 15 years. The parents were not known to be consanguineous. Gozukara et al. (2001) studied 19 microsatellite markers flanking the XPC gene on chromosome 3; their results suggested that the XPC allele passed between Italy and Turkey approximately 300 to 500 years ago. The R579X XPC allele is thus associated with severe clinical disease with multiple skin cancers and early death.


.0008   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, IVS3AS, T-A, -9
SNP: rs794729656, ClinVar: RCV000000284

In 2 sibs with xeroderma pigmentosum type C (XPC; 278720) and multiple skin cancers from a consanguineous Turkish family, Khan et al. (2004) identified homozygosity for a -9T-A transversion in intron 3 of the XPC gene. The mutation was located in a splice lariat branchpoint sequence. PCR analysis of fibroblast cells detected an XPC mRNA isoform with deletion of exon 4 that had no DNA repair activity in a post-UV host cell reactivation assay. The 20-year-old male and his 16-year-old sister were severely affected. They developed skin lesions at 3 years of age. Both had cutaneous atrophy, telangiectasia, actinic keratoses, and multiple skin cancers including squamous cell carcinomas, basal cell carcinomas, and melanomas.


.0009   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, IVS3AS, A-G, -24
SNP: rs794729657, ClinVar: RCV000000285, RCV002292452

In 3 sibs with mild xeroderma pigmentosum type C (XPC; 278720) from a consanguineous Turkish family, Khan et al. (2004) identified homozygosity for a -24A-G transition in intron 3 of the XPC gene. Cells from the affected sibs produced 3 to 5% normal XPC message and had a higher level of post-UV host cell reactivation than cells from the severely affected sibs harboring the -9T-A mutation (613208.0008). The authors concluded that a small amount of normal XPC mRNA can provide partial protection against skin cancers. The 3 sisters, aged 20, 18, and 11 years, were mildly affected. Skin lesions began at age 3 to 5 years. They had freckling but no skin atrophy, telangiectasia, or actinic keratoses. The oldest sister had a squamous cell carcinoma excised from her face at age 12 years. The other sisters did not have skin cancer.


.0010   XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C

XPC, 2-BP DEL, 1744TG
SNP: rs754532049, gnomAD: rs754532049, ClinVar: RCV000000286, RCV000781925, RCV000791609, RCV002251840, RCV003952331

In affected members of 14 Tunisian families with severe xeroderma pigmentosum type C (XPC; 278720), Ben Rekaya et al. (2009) identified a homozygous 2-bp deletion (1744delTG) in exon 9 of the XPC gene, resulting in a frameshift and premature termination (fsTer572). Clinical features included photophobia and skin tumors, including basal cell carcinoma, squamous cell carcinoma, and malignant melanoma. None of the patients had neurologic abnormalities. Haplotype analysis indicated a founder effect.


See Also:

Cleaver (1986)

REFERENCES

  1. Anantharaman, V., Koonin, E. V., Aravind, L. Peptide-N-glycanases and DNA repair proteins, Xp-C/Rad4, are, respectively, active and inactivated enzymes sharing a common transglutaminase fold. Hum. Molec. Genet. 10: 1627-1630, 2001. [PubMed: 11487565] [Full Text: https://doi.org/10.1093/hmg/10.16.1627]

  2. Balbo Pogliano, C. B., Gatti, M., Ruthemann, P., Garajova, Z., Penengo, L., Naegeli, H. ASH1L histone methyltransferase regulates the handoff between damage recognition factors in global-genome nucleotide excision repair. Nature Commun. 8: 1333, 2017. Note: Electronic Article. [PubMed: 29109511] [Full Text: https://doi.org/10.1038/s41467-017-01080-8]

  3. Ben Rekaya, M., Messaoud, O., Talmoudi, F., Nouira, S., Ouragini, H., Amouri, A., Boussen, H., Boubaker, S., Mokni, M., Mokthar, I., Abdelhak, S., Zghal, M. High frequency of the V548A fs X572 XPC mutation in Tunisia: implication for molecular diagnosis. J. Hum. Genet. 54: 426-429, 2009. [PubMed: 19478817] [Full Text: https://doi.org/10.1038/jhg.2009.50]

  4. Chavanne, F., Broughton, B. C., Pietra, D., Nardo, T., Browitt, A., Lehmann, A. R., Stefanini, M. Mutations in the XPC gene in families with xeroderma pigmentosum and consequences at the cell, protein, and transcript levels. Cancer Res. 60: 1974-1982, 2000. [PubMed: 10766188]

  5. Cheo, D. L., Burns, D. K., Meira, L. B., Houle, J. F., Friedberg, E. C. Mutational inactivation of the xeroderma pigmentosum group C gene confers predisposition to 2-acetylaminofluorene-induced liver and lung cancer and to spontaneous testicular cancer in Trp53 -/- mice. Cancer Res. 59: 771-775, 1999. [PubMed: 10029060]

  6. Cleaver, J. E., Thompson, L. H., Richardson, A. S., States, J. C. A summary of mutations in the UV-sensitive disorders: xeroderma pigmentosum, Cockayne syndrome, and trichothiodystrophy. Hum. Mutat. 14: 9-22, 1999. [PubMed: 10447254] [Full Text: https://doi.org/10.1002/(SICI)1098-1004(1999)14:1<9::AID-HUMU2>3.0.CO;2-6]

  7. Cleaver, J. E. DNA repair in human xeroderma pigmentosum group C cells involves a different distribution of damaged sites in confluent and growing cells. Nucleic Acids Res. 14: 8155-8165, 1986. [PubMed: 3774554] [Full Text: https://doi.org/10.1093/nar/14.20.8155]

  8. Emmert, S., Kobayashi, N., Khan, S. G., Kraemer, K. H. The xeroderma pigmentosum group C gene leads to selective repair of cyclobutane pyrimidine dimers rather than 6-4 photoproducts. Proc. Nat. Acad. Sci. 97: 2151-2156, 2000. [PubMed: 10681431] [Full Text: https://doi.org/10.1073/pnas.040559697]

  9. Gozukara, E. M., Khan, S. G., Metin, A., Emmert, S., Busch, D. B., Shahlavi, T., Coleman, D. M., Miller, M., Chinsomboon, N., Stefanini, M., Kraemer, K. H. A stop codon in xeroderma pigmentosum group C families in Turkey and Italy: molecular genetic evidence for a common ancestor. J. Invest. Derm. 117: 197-204, 2001. [PubMed: 11511294] [Full Text: https://doi.org/10.1046/j.1523-1747.2001.01424.x]

  10. Hollander, M. C., Philburn, R. T., Patterson, A. D., Velasco-Miguel, S., Friedberg, E. C., Linnoila, R. I., Fornace, A. J., Jr. Deletion of XPC leads to lung tumors in mice and is associated with early events in human lung carcinogenesis. Proc. Nat. Acad. Sci. 102: 13200-13205, 2005. [PubMed: 16141330] [Full Text: https://doi.org/10.1073/pnas.0503133102]

  11. Khan, S. G., Levy, H. L., Legerski, R., Quackenbush, E., Reardon, J. T., Emmert, S., Sancar, A., Li, L., Schneider, T. D., Cleaver, J. E., Kraemer, K. H. Xeroderma pigmentosum group C splice mutation associated with autism and hypoglycinemia. J. Invest. Derm. 111: 791-796, 1998. Note: Erratum: J. Invest. Derm. 112: 402 only, 1999. [PubMed: 9804340] [Full Text: https://doi.org/10.1046/j.1523-1747.1998.00391.x]

  12. Khan, S. G., Metin, A., Gozukara, E., Inui, H., Shahlavi, T., Muniz-Medina, V., Baker, C. C., Ueda, T., Aiken, J. R., Schneider, T. D., Kraemer, K. H. Two essential splice lariat branchpoint sequences in one intron in a xeroderma pigmentosum DNA repair gene: mutations result in reduced XPC mRNA levels that correlate with cancer risk. Hum. Molec. Genet. 13: 343-352, 2004. [PubMed: 14662655] [Full Text: https://doi.org/10.1093/hmg/ddh026]

  13. Lalley, P. A., Diaz, J. A., Francis, A. A., Dunn, W. C., Regan, J. D. The expression and chromosomal assignments of genes required for repair of UV-induced DNA damage. Cytogenet. Cell Genet. 37: 516 only, 1984.

  14. Legerski, R. J., Liu, P., Li, L., Peterson, C. A., Zhao, Y., Leach, R. J., Naylor, S. L., Siciliano, M. J. Assignment of xeroderma pigmentosum group C (XPC) gene to chromosome 3p25. Genomics 21: 266-269, 1994. [PubMed: 8088800] [Full Text: https://doi.org/10.1006/geno.1994.1256]

  15. Legerski, R., Peterson, C. Expression cloning of a human DNA repair gene involved in xeroderma pigmentosum group C. Nature 359: 70-73, 1992. Note: Erratum: Nature 360: 610 only, 1992. [PubMed: 1522891] [Full Text: https://doi.org/10.1038/359070a0]

  16. Li, L., Bales, E. S., Peterson, C. A., Legerski, R. J. Characterization of molecular defects in xeroderma pigmentosum group C. Nature Genet. 5: 413-417, 1993. [PubMed: 8298653] [Full Text: https://doi.org/10.1038/ng1293-413]

  17. Masutani, C., Sugasawa, K., Yanagisawa, J., Sonoyama, T., Ui, M., Enomoto, T., Takio, K., Tanaka, K., van der Spek, P., Bootsma, D., Hoeijmakers, J. H. J., Hanaoka, F. Purification and cloning of a nucleotide excision repair complex involving the xeroderma pigmentosum group C protein and a human homologue of yeast RAD23. EMBO J. 13: 1831-1843, 1994. [PubMed: 8168482] [Full Text: https://doi.org/10.1002/j.1460-2075.1994.tb06452.x]

  18. Min, J.-H., Pavletich, N. P. Recognition of DNA damage by the Rad4 nucleotide excision repair protein. Nature 449: 570-575, 2007. [PubMed: 17882165] [Full Text: https://doi.org/10.1038/nature06155]

  19. Peterson, C., Legerski, R. High-frequency transformation of human repair-deficient cell lines by an Epstein-Barr virus-based cDNA expression vector. Gene 107: 279-284, 1991. [PubMed: 1660831] [Full Text: https://doi.org/10.1016/0378-1119(91)90328-9]

  20. Sands, A. T., Abuin, A., Sanchez, A., Conti, C. J., Bradley, A. High susceptibility to ultraviolet-induced carcinogenesis in mice lacking XPC. Nature 377: 162-165, 1995. [PubMed: 7675084] [Full Text: https://doi.org/10.1038/377162a0]

  21. Shimizu, Y., Iwai, S., Hanaoka, F., Sugasawa, K. Xeroderma pigmentosum group C protein interacts physically and functionally with thymine DNA glycosylase. EMBO J. 22: 164-173, 2003. [PubMed: 12505994] [Full Text: https://doi.org/10.1093/emboj/cdg016]

  22. Slor, H., Batko, S., Khan, S. G., Sobe, T., Emmert, S., Khadavi, A., Frumkin, A., Busch, D. B., Albert, R. B., Kraemer, K. H. Clinical, cellular, and molecular features of an Israeli xeroderma pigmentosum family with a frameshift mutation in the XPC gene: sun protection prolongs life. J. Invest. Derm. 115: 974-980, 2000. [PubMed: 11121128] [Full Text: https://doi.org/10.1046/j.1523-1747.2000.00190.x]

  23. Sugasawa, K., Ng, J. M. Y., Masutani, C., Iwai, S., van der Spek, P. J., Eker, A. P. M., Hanaoka, F., Bootsma, D., Hoeijmakers, J. H. J. Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair. Molec. Cell 2: 223-232, 1998. [PubMed: 9734359] [Full Text: https://doi.org/10.1016/s1097-2765(00)80132-x]

  24. Suzuki, T., Park, H., Hollingsworth, N. M., Sternglanz, R., Lennarz, W. L. PNG1, a yeast gene encoding a highly conserved peptide:N-glycanase. J. Cell Biol. 149: 1039-1052, 2000. [PubMed: 10831608] [Full Text: https://doi.org/10.1083/jcb.149.5.1039]

  25. Teitz, T., Naiman, T., Avissar, S. S., Bar, S., Okayama, H., Canaani, D. Complementation of the UV-sensitive phenotype of a xeroderma pigmentosum human cell line by transfection with a cDNA clone library. Proc. Nat. Acad. Sci. 84: 8801-8804, 1987. [PubMed: 3480511] [Full Text: https://doi.org/10.1073/pnas.84.24.8801]

  26. van der Spek, P. J., Visser, C. E., Hanaoka, F., Smit, B., Hagemeijer, A., Bootsma, D., Hoeijmakers, J. H. J. Cloning, comparative mapping, and RNA expression of the mouse homologues of the Saccharomyces cerevisiae nucleotide excision repair gene RAD23. Genomics 31: 20-27, 1996. [PubMed: 8808275] [Full Text: https://doi.org/10.1006/geno.1996.0004]

  27. Volker, M., Mone, M. J., Karmakar, P., van Hoffen, A., Schul, W., Vermeulen, W., Hoeijmakers, J. H. J., van Driel, R., van Zeeland, A. A., Mullenders, L. H. F. Sequential assembly of the nucleotide excision repair factors in vivo. Molec. Cell 8: 213-224, 2001. [PubMed: 11511374] [Full Text: https://doi.org/10.1016/s1097-2765(01)00281-7]


Contributors:
Patricia A. Hartz - updated : 02/08/2018

Creation Date:
Cassandra L. Kniffin : 1/7/2010

Edit History:
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terry : 11/5/2010
carol : 1/12/2010
ckniffin : 1/8/2010