Entry - #612285 - JOUBERT SYNDROME 9; JBTS9 - OMIM
# 612285

JOUBERT SYNDROME 9; JBTS9


Other entities represented in this entry:

JOUBERT SYNDROME 9/15, DIGENIC, INCLUDED

Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
4p15.32 Joubert syndrome 9 612285 AR 3 CC2D2A 612013
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal recessive
HEAD & NECK
Eyes
- Retinitis pigmentosa
- Astigmatism
- Nystagmus
- Cataract
NEUROLOGIC
Central Nervous System
- Mental retardation, mild to moderate
- Seizures (in some patients)
- Ventriculomegaly
- Molar tooth sign
MOLECULAR BASIS
- Caused by mutation in the coiled-coil and C2 domains-containing protein 2A (CC2D2A, 612013.0001)
Joubert syndrome - PS213300 - 43 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.32 Joubert syndrome 25 AR 3 616781 CEP104 616690
2q13 Joubert syndrome 4 AR 3 609583 NPHP1 607100
2q33.1 Joubert syndrome 14 AR 3 614424 TMEM237 614423
2q37.1 Joubert syndrome 30 AR 3 617622 ARMC9 617612
2q37.1 Joubert syndrome 22 AR 3 615665 PDE6D 602676
3q11.1-q11.2 Joubert syndrome 8 AR 3 612291 ARL13B 608922
4p15.32 Joubert syndrome 9 AR 3 612285 CC2D2A 612013
5p13.2 Joubert syndrome 17 AR 3 614615 CPLANE1 614571
5q23.2 Joubert syndrome 31 AR 3 617761 CEP120 613446
6q23.3 Joubert syndrome 3 AR 3 608629 AHI1 608894
7q32.2 Joubert syndrome 15 AR 3 614464 CEP41 610523
8q13.1-q13.2 Joubert syndrome 21 AR 3 615636 CSPP1 611654
8q22.1 Joubert syndrome 6 AR 3 610688 TMEM67 609884
9p21.2 Joubert syndrome 40 AR 3 619582 IFT74 608040
9q34.3 Joubert syndrome 1 AR 3 213300 INPP5E 613037
10q22.2 Joubert syndrome 36 AR 3 618763 FAM149B1 618413
10q24.1 Joubert syndrome 18 AR 3 614815 TCTN3 613847
10q24.32 Joubert syndrome 32 AR 3 617757 SUFU 607035
10q24.32 Joubert syndrome 35 AR 3 618161 ARL3 604695
11q12.2 Joubert syndrome 16 AR 3 614465 TMEM138 614459
11q12.2 Joubert syndrome 2 AR 3 608091 TMEM216 613277
11q24.2 Joubert syndrome 39 AR 3 619562 TMEM218 619285
12q21.32 Joubert syndrome 5 AR 3 610188 CEP290 610142
12q24.11 Joubert syndrome 13 AR 3 614173 TCTN1 609863
12q24.31 Joubert syndrome 24 AR 3 616654 TCTN2 613846
13q21.33-q22.1 Joubert syndrome 33 AR 3 617767 PIBF1 607532
14q21.2 Joubert syndrome 37 AR 3 619185 TOGARAM1 617618
14q23.1 Joubert syndrome 23 AR 3 616490 KIAA0586 610178
15q26.1 Acrocallosal syndrome AR 3 200990 KIF7 611254
15q26.1 Joubert syndrome 12 AR 3 200990 KIF7 611254
16p12.1 Joubert syndrome 26 AR 3 616784 KATNIP 616650
16q12.1 Joubert syndrome 19 AD, AR 3 614844 ZNF423 604557
16q12.1 Nephronophthisis 14 AD, AR 3 614844 ZNF423 604557
16q12.2 Joubert syndrome 7 AR 3 611560 RPGRIP1L 610937
16q23.1 Joubert syndrome 20 AR 3 614970 TMEM231 614949
17p13.1 ?Joubert syndrome 38 AR 3 619476 KIAA0753 617112
17p13.1 ?Joubert syndrome 29 AR 3 617562 TMEM107 616183
17p13.1 Meckel syndrome 13 AR 3 617562 TMEM107 616183
17p11.2 Joubert syndrome 27 AR 3 617120 B9D1 614144
17q22 Joubert syndrome 28 AR 3 617121 MKS1 609883
19q13.2 Joubert syndrome 34 AR 3 614175 B9D2 611951
19q13.2 ?Meckel syndrome 10 AR 3 614175 B9D2 611951
Xp22.2 Joubert syndrome 10 XLR 3 300804 OFD1 300170

TEXT

A number sign (#) is used with this entry because of evidence that Joubert syndrome-9 (JBTS9) is caused by homozygous or compound heterozygous mutation in the CC2D2A gene (612013) on chromosome 4p15. Digenic inheritance has also been reported; see MOLECULAR GENETICS.

Meckel syndrome-6 (MKS6; 612284) and COACH syndrome-2 (COACH2; 619111) are allelic disorders with overlapping features.


Description

Joubert syndrome-9 (JBTS9) is an autosomal recessive disorder characterized by hypotonia, ataxia, developmental delay, abnormal eye movements, and abnormal respiratory control. Variable features include retinal dystrophy, kidney disease, and seizures. Brain imaging shows cerebellar vermis hypoplasia and the 'molar tooth sign.' Brain imaging may also show ventriculomegaly (Bachmann-Gagescu et al., 2012).

For a general phenotypic description and a discussion of genetic heterogeneity of Joubert syndrome, see JBST1 (213300).


Clinical Features

Noor et al. (2008) ascertained a highly consanguineous Pakistani family segregating autosomal recessive mild to moderate mental retardation and retinitis pigmentosa (RP), with 4 living affected individuals; an additional family member with mental retardation was determined to be a 48,XXXX phenocopy. Height, weight, and occipitofrontal circumference were within the normal range in all affected individuals, and there was no facial dysmorphism. The 3 older patients all had retinitis pigmentosa, astigmatism, and nystagmus; the youngest, at age 3 years, did not have RP but did have astigmatism and nystagmus. RP was not present in other members of the family. The oldest affected individual also had early cataract. Gorden et al. (2008) reviewed the brain MRIs of the patients reported by Noor et al. (2008) and determined that they had findings consistent with Joubert syndrome. In an erratum, Noor et al. (2008) agreed.

Gorden et al. (2008) reported 7 families with Joubert syndrome linked to chromosome 4p. The clinical features were variable, but common features included the molar tooth sign, cerebellar vermis hypoplasia, and abnormal eye movements. Two patients had retinal dystrophy and 2 had a history of encephalocele. One patient had abnormal renal ultrasound and hepatosplenomegaly, and another had renal disease. One additional patient was a 22-year-old woman with agenesis of the corpus callosum, hydrocephalus, cerebellar vermis hypoplasia, abnormal eye movements, coloboma, mild renal disease, and hepatic fibrosis requiring liver transplant at age 10 years. Gorden et al. (2008) noted that the features in this patient were reminiscent of COACH syndrome (COACH2; 619111), which in some cases may be a variant representing a transitional phenotype between Joubert syndrome and Meckel syndrome (249000).


Inheritance

The transmission pattern of JBTS9 in the family reported by Noor et al. (2008) was consistent with autosomal recessive inheritance.


Mapping

In a consanguineous Pakistani family segregating Joubert syndrome, Noor et al. (2008) performed homozygosity mapping using Affymetrix 500K microarrays and identified an 11.2-Mb homozygous and haploidentical region on chromosome 4p15.33-p15.2. Linkage analysis across this region yielded a maximum 2-point lod score of 3.59 at marker D4S419.


Molecular Genetics

In affected members of a consanguineous Pakistani family with Joubert syndrome, Noor et al. (2008) identified homozygosity for a splice site mutation in the CC2D2A gene (612013.0001) that segregated with the phenotype. The mutation was not found in 460 Pakistani control chromosomes.

Gorden et al. (2008) identified 7 different mutations in the CC2D2A gene (see, e.g., 612013.0003-612013.0006) in 6 (9%) of 70 families with clinical features consistent with Joubert syndrome. One of the patients had COACH syndrome (COACH2; 619111), defined as a subtype of Joubert syndrome with liver disease.

Lee et al. (2012) reported 2 patients with Joubert syndrome who had a heterozygous mutation in the CC2D2A gene, consistent with JBTS9 (see 612013.0007 and 612013.0009), and a heterozygous mutation in the CEP41 gene (see 612013.0005 and 612013.0006), consistent with JBTS15 (614464), indicating digenic inheritance.


Genotype/Phenotype Correlations

Bachmann-Gagescu et al. (2012) identified biallelic pathogenic mutations in the CC2D2A gene in 20 patients from 17 unrelated families with Joubert syndrome. The patients were ascertained from a larger cohort of 209 families with the disorder, yielding a prevalence of about 8% for those with CC2D2A mutations. Patients with CC2D2A-related Joubert syndrome were more likely to have ventriculomegaly and seizures compared to Joubert syndrome patients without CC2D2A mutations. Although mutation-specific genotype-phenotype correlations could not be identified, most Joubert syndrome patients had at least 1 missense mutation, compared to those with the more severe Meckel syndrome, which tends to be associated with nonsense mutations (see 612013.0002).


REFERENCES

  1. Bachmann-Gagescu, R., Ishak, G. E., Dempsey, J. C., Adkins, J., O'Day, D., Phelps, I. G., Gunay-Aygun, M., Kline, A. D., Szczaluba, K., Martorell, L., Alswaid, A., Alrasheed, S., Pai, S., Izatt, L., Ronan, A., Parisi, M. A., Mefford, H., Glass, I., Doherty, D. Genotype-phenotype correlation in CC2D2A-related Joubert syndrome reveals an association with ventriculomegaly and seizures. J. Med. Genet. 49: 126-137, 2012. [PubMed: 22241855, related citations] [Full Text]

  2. Gorden, N. T., Arts, H. H., Parisi, M. A., Coene, K. L. M., Letteboer, S. J. F., van Beersum, S. E. C., Mans, D. A., Hikida, A., Eckert, M., Knutzen, D., Alswaid, A. F., Ozyurek, H., and 23 others. CC2D2A is mutated in Joubert syndrome and interacts with the ciliopathy-associated basal body protein CEP290. Am. J. Hum. Genet. 83: 559-571, 2008. [PubMed: 18950740, images, related citations] [Full Text]

  3. Lee, J. E., Silhavy, J. L., Zaki, M. S., Schroth, J., Bielas, S. L., Marsh, S. E., Olvera, J., Brancati, F., Iannicelli, M., Ikegami, K., Schlossman, A. M., Merriman, B., and 18 others. CEP41 is mutated in Joubert syndrome and is required for tubulin glutamylation at the cilium. Nature Genet. 44: 193-199, 2012. [PubMed: 22246503, images, related citations] [Full Text]

  4. Noor, A., Windpassinger, C., Patel, M., Stachowiak, B., Mikhailov, A., Azam, M., Irfan, M., Siddiqui, Z. K., Naeem, F., Paterson, A. D., Lutfullah, M., Vincent, J. B., Ayub, M. CC2D2A, encoding a coiled-coil and C2 domain protein, causes autosomal-recessive mental retardation with retinitis pigmentosa. Am. J. Hum. Genet. 82: 1011-1018, 2008. Note: Erratum: Am. J. Hum. Genet. 83: 656 only, 2008. [PubMed: 18387594, images, related citations] [Full Text]


Cassandra L. Kniffin - updated : 9/18/2013
Cassandra L. Kniffin - updated : 2/2/2012
Cassandra L. Kniffin - updated : 11/26/2008
Creation Date:
Marla J. F. O'Neill : 9/12/2008
alopez : 11/11/2022
carol : 12/02/2020
alopez : 05/14/2019
carol : 09/30/2013
ckniffin : 9/18/2013
ckniffin : 9/18/2013
carol : 2/2/2012
wwang : 6/25/2010
ckniffin : 6/25/2010
terry : 1/21/2010
carol : 12/4/2008
ckniffin : 11/26/2008
joanna : 9/23/2008
wwang : 9/12/2008

# 612285

JOUBERT SYNDROME 9; JBTS9


Other entities represented in this entry:

JOUBERT SYNDROME 9/15, DIGENIC, INCLUDED

ORPHA: 2318, 475;   DO: 0111004;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
4p15.32 Joubert syndrome 9 612285 Autosomal recessive 3 CC2D2A 612013

TEXT

A number sign (#) is used with this entry because of evidence that Joubert syndrome-9 (JBTS9) is caused by homozygous or compound heterozygous mutation in the CC2D2A gene (612013) on chromosome 4p15. Digenic inheritance has also been reported; see MOLECULAR GENETICS.

Meckel syndrome-6 (MKS6; 612284) and COACH syndrome-2 (COACH2; 619111) are allelic disorders with overlapping features.


Description

Joubert syndrome-9 (JBTS9) is an autosomal recessive disorder characterized by hypotonia, ataxia, developmental delay, abnormal eye movements, and abnormal respiratory control. Variable features include retinal dystrophy, kidney disease, and seizures. Brain imaging shows cerebellar vermis hypoplasia and the 'molar tooth sign.' Brain imaging may also show ventriculomegaly (Bachmann-Gagescu et al., 2012).

For a general phenotypic description and a discussion of genetic heterogeneity of Joubert syndrome, see JBST1 (213300).


Clinical Features

Noor et al. (2008) ascertained a highly consanguineous Pakistani family segregating autosomal recessive mild to moderate mental retardation and retinitis pigmentosa (RP), with 4 living affected individuals; an additional family member with mental retardation was determined to be a 48,XXXX phenocopy. Height, weight, and occipitofrontal circumference were within the normal range in all affected individuals, and there was no facial dysmorphism. The 3 older patients all had retinitis pigmentosa, astigmatism, and nystagmus; the youngest, at age 3 years, did not have RP but did have astigmatism and nystagmus. RP was not present in other members of the family. The oldest affected individual also had early cataract. Gorden et al. (2008) reviewed the brain MRIs of the patients reported by Noor et al. (2008) and determined that they had findings consistent with Joubert syndrome. In an erratum, Noor et al. (2008) agreed.

Gorden et al. (2008) reported 7 families with Joubert syndrome linked to chromosome 4p. The clinical features were variable, but common features included the molar tooth sign, cerebellar vermis hypoplasia, and abnormal eye movements. Two patients had retinal dystrophy and 2 had a history of encephalocele. One patient had abnormal renal ultrasound and hepatosplenomegaly, and another had renal disease. One additional patient was a 22-year-old woman with agenesis of the corpus callosum, hydrocephalus, cerebellar vermis hypoplasia, abnormal eye movements, coloboma, mild renal disease, and hepatic fibrosis requiring liver transplant at age 10 years. Gorden et al. (2008) noted that the features in this patient were reminiscent of COACH syndrome (COACH2; 619111), which in some cases may be a variant representing a transitional phenotype between Joubert syndrome and Meckel syndrome (249000).


Inheritance

The transmission pattern of JBTS9 in the family reported by Noor et al. (2008) was consistent with autosomal recessive inheritance.


Mapping

In a consanguineous Pakistani family segregating Joubert syndrome, Noor et al. (2008) performed homozygosity mapping using Affymetrix 500K microarrays and identified an 11.2-Mb homozygous and haploidentical region on chromosome 4p15.33-p15.2. Linkage analysis across this region yielded a maximum 2-point lod score of 3.59 at marker D4S419.


Molecular Genetics

In affected members of a consanguineous Pakistani family with Joubert syndrome, Noor et al. (2008) identified homozygosity for a splice site mutation in the CC2D2A gene (612013.0001) that segregated with the phenotype. The mutation was not found in 460 Pakistani control chromosomes.

Gorden et al. (2008) identified 7 different mutations in the CC2D2A gene (see, e.g., 612013.0003-612013.0006) in 6 (9%) of 70 families with clinical features consistent with Joubert syndrome. One of the patients had COACH syndrome (COACH2; 619111), defined as a subtype of Joubert syndrome with liver disease.

Lee et al. (2012) reported 2 patients with Joubert syndrome who had a heterozygous mutation in the CC2D2A gene, consistent with JBTS9 (see 612013.0007 and 612013.0009), and a heterozygous mutation in the CEP41 gene (see 612013.0005 and 612013.0006), consistent with JBTS15 (614464), indicating digenic inheritance.


Genotype/Phenotype Correlations

Bachmann-Gagescu et al. (2012) identified biallelic pathogenic mutations in the CC2D2A gene in 20 patients from 17 unrelated families with Joubert syndrome. The patients were ascertained from a larger cohort of 209 families with the disorder, yielding a prevalence of about 8% for those with CC2D2A mutations. Patients with CC2D2A-related Joubert syndrome were more likely to have ventriculomegaly and seizures compared to Joubert syndrome patients without CC2D2A mutations. Although mutation-specific genotype-phenotype correlations could not be identified, most Joubert syndrome patients had at least 1 missense mutation, compared to those with the more severe Meckel syndrome, which tends to be associated with nonsense mutations (see 612013.0002).


REFERENCES

  1. Bachmann-Gagescu, R., Ishak, G. E., Dempsey, J. C., Adkins, J., O'Day, D., Phelps, I. G., Gunay-Aygun, M., Kline, A. D., Szczaluba, K., Martorell, L., Alswaid, A., Alrasheed, S., Pai, S., Izatt, L., Ronan, A., Parisi, M. A., Mefford, H., Glass, I., Doherty, D. Genotype-phenotype correlation in CC2D2A-related Joubert syndrome reveals an association with ventriculomegaly and seizures. J. Med. Genet. 49: 126-137, 2012. [PubMed: 22241855] [Full Text: https://doi.org/10.1136/jmedgenet-2011-100552]

  2. Gorden, N. T., Arts, H. H., Parisi, M. A., Coene, K. L. M., Letteboer, S. J. F., van Beersum, S. E. C., Mans, D. A., Hikida, A., Eckert, M., Knutzen, D., Alswaid, A. F., Ozyurek, H., and 23 others. CC2D2A is mutated in Joubert syndrome and interacts with the ciliopathy-associated basal body protein CEP290. Am. J. Hum. Genet. 83: 559-571, 2008. [PubMed: 18950740] [Full Text: https://doi.org/10.1016/j.ajhg.2008.10.002]

  3. Lee, J. E., Silhavy, J. L., Zaki, M. S., Schroth, J., Bielas, S. L., Marsh, S. E., Olvera, J., Brancati, F., Iannicelli, M., Ikegami, K., Schlossman, A. M., Merriman, B., and 18 others. CEP41 is mutated in Joubert syndrome and is required for tubulin glutamylation at the cilium. Nature Genet. 44: 193-199, 2012. [PubMed: 22246503] [Full Text: https://doi.org/10.1038/ng.1078]

  4. Noor, A., Windpassinger, C., Patel, M., Stachowiak, B., Mikhailov, A., Azam, M., Irfan, M., Siddiqui, Z. K., Naeem, F., Paterson, A. D., Lutfullah, M., Vincent, J. B., Ayub, M. CC2D2A, encoding a coiled-coil and C2 domain protein, causes autosomal-recessive mental retardation with retinitis pigmentosa. Am. J. Hum. Genet. 82: 1011-1018, 2008. Note: Erratum: Am. J. Hum. Genet. 83: 656 only, 2008. [PubMed: 18387594] [Full Text: https://doi.org/10.1016/j.ajhg.2008.01.021]


Contributors:
Cassandra L. Kniffin - updated : 9/18/2013
Cassandra L. Kniffin - updated : 2/2/2012
Cassandra L. Kniffin - updated : 11/26/2008

Creation Date:
Marla J. F. O'Neill : 9/12/2008

Edit History:
alopez : 11/11/2022
carol : 12/02/2020
alopez : 05/14/2019
carol : 09/30/2013
ckniffin : 9/18/2013
ckniffin : 9/18/2013
carol : 2/2/2012
wwang : 6/25/2010
ckniffin : 6/25/2010
terry : 1/21/2010
carol : 12/4/2008
ckniffin : 11/26/2008
joanna : 9/23/2008
wwang : 9/12/2008