Entry - #609813 - SPONDYLOCOSTAL DYSOSTOSIS 3, AUTOSOMAL RECESSIVE; SCDO3 - OMIM
# 609813

SPONDYLOCOSTAL DYSOSTOSIS 3, AUTOSOMAL RECESSIVE; SCDO3


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
7p22.3 Spondylocostal dysostosis 3, autosomal recessive 609813 AR 3 LFNG 602576
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal recessive
GROWTH
Height
- Short stature
CHEST
Ribs Sternum Clavicles & Scapulae
- Fused ribs
SKELETAL
Spine
- Multiple vertebral anomalies
- Hypoplastic odontoid process
- 'Pebble-beach' appearance of vertebral bodies
- Multiple vertebral ossification centers
- Scoliosis, nonprogressive (cervical and thoracic)
- Kyphosis
Pelvis
- Normal pelvis
Limbs
- Normal long bones
MISCELLANEOUS
- Two patients have been independently reported (last curated February 2019)
MOLECULAR BASIS
- Caused by mutation in the lunatic fringe gene (LFNG, 602576.0001)

TEXT

A number sign (#) is used with this entry because of evidence that autosomal recessive spondylocostal dysostosis-3 (SCDO3) is caused by homozygous or compound heterozygous mutation in the LFNG gene (602576) on chromosome 7p22.

For a phenotypic description and a discussion of genetic heterogeneity of spondylocostal dysostosis, see 277300.


Clinical Features

Sparrow et al. (2006) reported a proband of Lebanese background who presented with extensive congenital vertebral anomalies; long, slender fingers; and camptodactyly of the left index finger. X-ray and magnetic resonance imaging (MRI) scans showed multiple vertebral ossification centers in the thoracic spine, which showed fitted angular shapes similar to those seen in the patient with spondylocostal dysostosis (SCDO2; see 608681) caused by mutation in the MESP2 gene (605195) (Whittock et al., 2004). Severe foreshortening of the spine was emphasized by comparison of the patient's arm span (186.5 cm) with adult height (155 cm; lower segment 92.5 cm). In contrast to SCDO2, vertebral anomalies were also present in the cervical and lumbar spine.

Otomo et al. (2019) described a 9-month-old Japanese boy with a spinal deformity. His height was approximately -2.5 SD. He had multiple vertebral anomalies from cervical to sacral vertebrae as well as defect and fusion of ribs. Radiographs showed normal pelvis and long tubular bones, but a 'pebble-beach' appearance of the vertebral bodies. Lateral view of the cervical spine showed kyphosis and a hypoplastic odontoid process.


Inheritance

The transmission pattern of SCDO3 in the patient reported by Sparrow et al. (2006) and the patient reported by Otomo et al. (2019) was consistent with autosomal recessive inheritance.


Molecular Genetics

In a Lebanese patient with spondylocostal dysostosis in whom mutations in the DLL3 (602768) and MESP2 genes were excluded, Sparrow et al. (2006) screened for mutations in the LFNG gene based on the phenotype of the homologous mouse mutant and identified a homozygous missense mutation (F188L; 602576.0001). Both parents with normal spinal and hand anatomy were heterozygous for the mutant allele. Based on comparison with the Lfng-null mouse, Sparrow et al. (2006) suggested that the hand anomalies in the proband were not caused by the LFNG mutation but were a secondary consequence of the cervical segmentation phenotype through nerve entrapment.

In a 9-month-old Japanese boy with spondylocostal dysostosis, Otomo et al. (2019) found compound heterozygosity for a missense (D201N; 602576.0002) and a frameshift (602576.0003) mutation in the LFNG gene. Each parent was heterozygous for 1 of the mutations. Neither mutation was found in the ExAC, ESP6500, or iJGVD databases.


REFERENCES

  1. Otomo, N., Mizumoto, S., Lu, H.-F., Takeda, K., Campos-Xavier, B., Mittaz-Crettol, L., Guo, L., Takikawa, K., Nakamura, M., Yamada, S., Matsumoto, M., Watanabe, K., Ikegawa, S. Identification of novel LFNG mutations in spondylocostal dysostosis. J. Hum. Genet. 64: 261-264, 2019. [PubMed: 30531807, related citations] [Full Text]

  2. Sparrow, D. B., Chapman, G., Wouters, M. A., Whittock, N. V., Ellard, S., Fatkin, D., Turnpenny, P. D., Kusumi, K., Sillence, D., Dunwoodie, S. L. Mutation of the lunatic fringe gene in humans causes spondylocostal dysostosis with a severe vertebral phenotype. Am. J. Hum. Genet. 78: 28-37, 2006. [PubMed: 16385447, images, related citations] [Full Text]

  3. Whittock, N. V., Sparrow, D. B., Wouters, M. A., Sillence, D., Ellard, S., Dunwoodie, S. L., Turnpenny, P. D. Mutated MESP2 causes spondylocostal dysostosis in humans. Am. J. Hum. Genet. 74: 1249-1254, 2004. [PubMed: 15122512, images, related citations] [Full Text]


Contributors:
Joanna S. Amberger - updated : 02/27/2019
Creation Date:
Anne M. Stumpf : 12/30/2005
carol : 03/19/2024
carol : 02/28/2019
carol : 02/27/2019
carol : 02/05/2014
carol : 10/19/2009
joanna : 2/2/2009
alopez : 1/4/2006
alopez : 12/30/2005

# 609813

SPONDYLOCOSTAL DYSOSTOSIS 3, AUTOSOMAL RECESSIVE; SCDO3


ORPHA: 2311;   DO: 0112361;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
7p22.3 Spondylocostal dysostosis 3, autosomal recessive 609813 Autosomal recessive 3 LFNG 602576

TEXT

A number sign (#) is used with this entry because of evidence that autosomal recessive spondylocostal dysostosis-3 (SCDO3) is caused by homozygous or compound heterozygous mutation in the LFNG gene (602576) on chromosome 7p22.

For a phenotypic description and a discussion of genetic heterogeneity of spondylocostal dysostosis, see 277300.


Clinical Features

Sparrow et al. (2006) reported a proband of Lebanese background who presented with extensive congenital vertebral anomalies; long, slender fingers; and camptodactyly of the left index finger. X-ray and magnetic resonance imaging (MRI) scans showed multiple vertebral ossification centers in the thoracic spine, which showed fitted angular shapes similar to those seen in the patient with spondylocostal dysostosis (SCDO2; see 608681) caused by mutation in the MESP2 gene (605195) (Whittock et al., 2004). Severe foreshortening of the spine was emphasized by comparison of the patient's arm span (186.5 cm) with adult height (155 cm; lower segment 92.5 cm). In contrast to SCDO2, vertebral anomalies were also present in the cervical and lumbar spine.

Otomo et al. (2019) described a 9-month-old Japanese boy with a spinal deformity. His height was approximately -2.5 SD. He had multiple vertebral anomalies from cervical to sacral vertebrae as well as defect and fusion of ribs. Radiographs showed normal pelvis and long tubular bones, but a 'pebble-beach' appearance of the vertebral bodies. Lateral view of the cervical spine showed kyphosis and a hypoplastic odontoid process.


Inheritance

The transmission pattern of SCDO3 in the patient reported by Sparrow et al. (2006) and the patient reported by Otomo et al. (2019) was consistent with autosomal recessive inheritance.


Molecular Genetics

In a Lebanese patient with spondylocostal dysostosis in whom mutations in the DLL3 (602768) and MESP2 genes were excluded, Sparrow et al. (2006) screened for mutations in the LFNG gene based on the phenotype of the homologous mouse mutant and identified a homozygous missense mutation (F188L; 602576.0001). Both parents with normal spinal and hand anatomy were heterozygous for the mutant allele. Based on comparison with the Lfng-null mouse, Sparrow et al. (2006) suggested that the hand anomalies in the proband were not caused by the LFNG mutation but were a secondary consequence of the cervical segmentation phenotype through nerve entrapment.

In a 9-month-old Japanese boy with spondylocostal dysostosis, Otomo et al. (2019) found compound heterozygosity for a missense (D201N; 602576.0002) and a frameshift (602576.0003) mutation in the LFNG gene. Each parent was heterozygous for 1 of the mutations. Neither mutation was found in the ExAC, ESP6500, or iJGVD databases.


REFERENCES

  1. Otomo, N., Mizumoto, S., Lu, H.-F., Takeda, K., Campos-Xavier, B., Mittaz-Crettol, L., Guo, L., Takikawa, K., Nakamura, M., Yamada, S., Matsumoto, M., Watanabe, K., Ikegawa, S. Identification of novel LFNG mutations in spondylocostal dysostosis. J. Hum. Genet. 64: 261-264, 2019. [PubMed: 30531807] [Full Text: https://doi.org/10.1038/s10038-018-0548-2]

  2. Sparrow, D. B., Chapman, G., Wouters, M. A., Whittock, N. V., Ellard, S., Fatkin, D., Turnpenny, P. D., Kusumi, K., Sillence, D., Dunwoodie, S. L. Mutation of the lunatic fringe gene in humans causes spondylocostal dysostosis with a severe vertebral phenotype. Am. J. Hum. Genet. 78: 28-37, 2006. [PubMed: 16385447] [Full Text: https://doi.org/10.1086/498879]

  3. Whittock, N. V., Sparrow, D. B., Wouters, M. A., Sillence, D., Ellard, S., Dunwoodie, S. L., Turnpenny, P. D. Mutated MESP2 causes spondylocostal dysostosis in humans. Am. J. Hum. Genet. 74: 1249-1254, 2004. [PubMed: 15122512] [Full Text: https://doi.org/10.1086/421053]


Contributors:
Joanna S. Amberger - updated : 02/27/2019

Creation Date:
Anne M. Stumpf : 12/30/2005

Edit History:
carol : 03/19/2024
carol : 02/28/2019
carol : 02/27/2019
carol : 02/05/2014
carol : 10/19/2009
joanna : 2/2/2009
alopez : 1/4/2006
alopez : 12/30/2005