nsv513764
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:195,629
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 482 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 477 SVs from 56 studies. See in: genome view
Overlapping variant regions from other studies: 139 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 160 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv513764 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 114,967,659 | 115,163,287 |
| nsv513764 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | Second Pass | NC_000023.10 | ChrX | 114,202,222 | 114,397,850 |
| nsv513764 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_004070891.1 | ChrX|NW_00 4070891.1 | 636,461 | 832,089 |
| nsv513764 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 114,108,478 | 114,304,106 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv627016 | insertion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv627016 | Remapped | Perfect | NC_000023.11:g.(11 4967659_?)_(?_1151 63287)ins195629 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 114,967,659 | 115,163,287 |
| nssv627016 | Remapped | Perfect | NW_004070891.1:g.( 636461_?)_(?_83208 9)ins195629 | GRCh37.p13 | First Pass | NW_004070891.1 | ChrX|NW_00 4070891.1 | 636,461 | 832,089 |
| nssv627016 | Remapped | Perfect | NC_000023.10:g.(11 4202222_?)_(?_1143 97850)ins195629 | GRCh37.p13 | Second Pass | NC_000023.10 | ChrX | 114,202,222 | 114,397,850 |
| nssv627016 | Submitted genomic | NC_000023.9:g.(114 108478_?)_(?_11430 4106)ins195629 | NCBI36 (hg18) | NC_000023.9 | ChrX | 114,108,478 | 114,304,106 |