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Nishihara S, Angata K, Aoki-Kinoshita KF, et al., editors. Glycoscience Protocols (GlycoPODv2) [Internet]. Saitama (JP): Japan Consortium for Glycobiology and Glycotechnology; 2021-.
Introduction
The cellular localization and tissue distribution of heparan sulfate (HS) can be investigated by immunostaining using anti-HS antibodies (1–3). However, HS preparations derived from various sources differ in their reactivity to an anti-HS antibody depending on the epitope content along the HS chain. A single anti-HS antibody can react with only particular HS chains, which have a specific epitope structure. To detect all HS-proteoglycans simultaneously, the anti-HS “stub” antibody, F69-3G10, is available after treatment with bacterial heparin/HS lyases. The epitope structure of this antibody is generated only by digestion with the bacterial lyases. Characteristics of major anti-HS antibodies are summarized in the chapter “Application of anti-glycosaminoglycan antibodies and biotinylated hyaluronan binding protein (bHABP) [1] ~ Characteristics and epitopes for anti-heparan sulfate antibodies.”
Protocol
HS is ubiquitously expressed on the cell surface and in the extracellular matrix of animal tissues. Immunostaining using anti-HS antibodies is an effective way for visualizing the cellular localization and tissue distribution of HS. Although the reactivity of HS to an anti-HS antibody differs depending on the epitope content along the HS chain, here, we show the protocols of immunostaining COS-7 cells and a liver tissue with an anti-HS antibody, F58-10E4, as examples.
Materials
- 1.
0.01 M Phosphate-buffered saline, pH 7.4 (PBS)
- 2.
Paraformaldehyde (PFA)
- 3.
Bovine serum albumin (BSA)
- 4.
Anti-HS antibody, F58-10E4 (Seikagaku Corp., Tokyo, Japan) (Note 1)
- 5.
Alexa Fluor® 488 goat anti-mouse IgM, 2 mg/mL (Thermo Fisher Scientific, Waltham, MA, USA)
- 6.
Anti-mouse IgM biotin conjugate antibody
- 7.
4’,6-Diamino-2-phenylindole (DAPI) (Thermo Fisher Scientific)
- 8.
VECTASHIELS mounting medium (Vector Laboratories Inc., Burlingame, CA)
- 9.
30% H2O2
- 10.
Vectastain ABC kit (Vector Laboratories Inc.)
- 11.
3-3’-Diaminobenzidine (DAB) tetrahydrochloride
Instrument
- 1.
Fluorescence microscope, BZ-9000 (KEYENCE Corporation, Osaka, Japan)
Methods
- 1.
Staining of cells
- a.
Seed cells on a cover glass in a 6-cm dish.
- b.
Transfer the cover glass to a 6-well plate and wash it with PBS three times.
- c.
Add 1 mL of 4% PFA/PBS to the well for fixing and incubate at room temperature for 30 min.
- d.
Wash the cover glass with PBS for 1 s once and then for 5 min three times. (Note 2)
- e.
Add 200 μL of 1% BSA/PBS to the cover glass for blocking and incubate at room temperature for 30 min.
- f.
Wash the cover glass with PBS twice and then with 1% BSA/PBS once.
- g.
Transfer the cover glass to a humid box.
- h.
Add 200 μL of the anti-HS antibody F58-10E4 (diluted 1:200 in 1% BSA/PBS) and incubate at 4°C overnight. (Note 3)
- i.
Transfer the cover glass to a 6-well plate, and wash it with PBS for 5 min three times.
- j.
Wash the cover glass with 1% BSA/PBS twice.
- k.
Transfer the cover glass to a humid box.
- l.
Add 200 μL of the secondary antibody, Alexa Fluor® 488 goat anti-mouse IgM (diluted 1: 200 in 1% BSA/PBS), and incubate for 1 h at room temperature with light shielding (Note 3).
- m.
Transfer the cover glass to a 6-well plate and wash it with PBS for 5 min three times.
- n.
Add 1 mL of 5 ng/mL DAPI and incubate for 5 min at room temperature with light shielding.
- o.
Wash the cover glass with PBS for 1 s once and then for 5 min three times.
- p.
Mount the cover glass using the mounting medium.
- q.
Capture images using a fluorescent microscope (Figure 1).
- 2.
Staining of tissues
- a.
Soak a paraffin-embedded section on a glass slide in xylene (three times), ethanol (twice), 90%, 70%, and 50% ethanol sequentially for 5 min each, and then in 2 changes of H2O for 5 min each in a Coplin jar at room temperature for deparaffinization and hydration (Note 4).
- b.
Soak the section in two changes in PBS for 5 min and then 0.1% Triton X-100/PBS for 10 min for the retrieval of the antigen.
- c.
Soak the slide in two changes in PBS and then in H2O for 5 min.
- d.
Soak the slide in 3% H2O2/methanol at room temperature for 30 min for the inactivation of endogenous peroxidases.
- e.
Soak the slide in two changes in H2O and then two changes in PBS for 5 min each.
- f.
Add 200 μL of 3% BSA/PBS to the section for blocking in a humid box and incubate for 1 h at room temperature.
- g.
Tap off the excess BSA/PBS solution.
- h.
Add 200 μL of the anti-HS antibody, F58-10E4 (diluted 1:100 in 1% BSA/PBS), to the section in a humid box and incubate at 4°C overnight.
- i.
Tap off the excess antibody solution.
- j.
Soak the slide in PBS for 1 s once and then in three changes in PBS for 5 min each (Note 5).
- k.
Add 200 μL of the secondary antibody, anti-mouse IgM biotin conjugate antibody (diluted 1:100 in 1% BSA/PBS), to the section in a humid box and incubate at room temperature for 1 h.
- l.
Tap off the excess secondary antibody solution.
- m.
Soak the slide in PBS for 1 s once and then in three changes in PBS for 5 min each.
- n.
Add 200 μL of the ABC solution of the Vectastain ABC kit (diluted 1:200 in PBS) to the section in a humid box and incubate at room temperature for 1 h.
- o.
Tap off the excess ABC solution.
- p.
Soak the slide in PBS for 1 s once and then in three changes in PBS for 5 min each (Note 5).
- q.
Soak the slide in 0.06% DAB/PBS for 10 min and then in 0.01% H2O2/0.06% DAB/PBS within 10 min until the color is developed.
- r.
Soak the slide in PBS for 1 s to terminate the reaction and then in three changes in PBS for 5 min each.
- s.
Soak the slide in H2O for 5 min and then in 20%, 40%, 80%, and 100% ethanol sequentially for 5 min each.
- t.
Soak the slide in three changes in xylene for 10 min each.
- u.
Dry the section in air.
- v.
Mount the sections under a cover glass using the mounting medium.
- w.
Capture images using a microscope (Figure 2).
Notes
- 1.
Seikagaku Corp. discontinued its research reagent business on Sept. 30, 2011. Anti-HS antibodies are available from several companies, including Cosmo Bio Co., Ltd., Tokyo, Japan. Authentic HS preparations can be purchased from Sigma-Aldrich.
- 2.
To permeabilize the cells, they are treated with the lysis buffer (PBS containing 0.1% Triton X-100) for 5 min at room temperature after step 1d of Methods and then washed with PBS twice.
- 3.
The antibody solution should be diluted just before use.
- 4.
In the case of a frozen section, the section is soaked in acetone/methanol (1:1) for fixing and incubated at room temperature for 3 min. After the section has been dried in air, experiments can be performed from step 2d of Methods.
- 5.
Be careful not to overdevelop the preparations. The incubation period can be changed.
References
- 1.
- Li J, Kleeff J, Abiatari I, Kayed H, Giese NA, Felix K, Giese T, Büchler MW, Friess H. Enhanced levels of Hsulf-1 interfere with heparin-binding growth factor signaling in pancreatic cancer. Mol Cancer. 2005 Apr 7;4(1):14. [PMC free article: PMC1087876] [PubMed: 15817123] [CrossRef]
- 2.
- Stickens D, Zak BM, Rougier N, Esko JD, Werb Z. Mice deficient in Ext2 lack heparan sulfate and develop exostoses. Development. 2005 Nov;132(22):5055–68. [PMC free article: PMC2767329] [PubMed: 16236767] [CrossRef]
- 3.
- Pan Y, Woodbury A, Esko JD, Grobe K, Zhang X. Heparan sulfate biosynthetic gene Ndst1 is required for FGF signaling in early lens development. Development. 2006 Dec;133(24):4933–44. [PubMed: 17107998] [CrossRef]
Footnotes
The authors declare no competing or financial interests.
Figures

Figure 2:
Sections of liver stained with the anti–heparan sulfate antibody F58-10E4.
A significant staining with F58-10E4 (A) was observed between hepatic cells (indicated by arrows) but not with normal mouse IgM (negative control) (B). Scale bar, 50 μm.