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. 2011 Oct 7;89(4):543-50.
doi: 10.1016/j.ajhg.2011.09.007.

Absence of an orphan mitochondrial protein, c19orf12, causes a distinct clinical subtype of neurodegeneration with brain iron accumulation

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Absence of an orphan mitochondrial protein, c19orf12, causes a distinct clinical subtype of neurodegeneration with brain iron accumulation

Monika B Hartig et al. Am J Hum Genet. .

Abstract

The disease classification neurodegeneration with brain iron accumulation (NBIA) comprises a clinically and genetically heterogeneous group of progressive neurodegenerative disorders characterized by brain iron deposits in the basal ganglia. For about half of the cases, the molecular basis is currently unknown. We used homozygosity mapping followed by candidate gene sequencing to identify a homozygous 11 bp deletion in the orphan gene C19orf12. Mutation screening of 23 ideopathic NBIA index cases revealed two mutated alleles in 18 of them, and one loss-of-function mutation is the most prevalent. We also identified compound heterozygous missense mutations in a case initially diagnosed with Parkinson disease at age 49. Psychiatric signs, optic atrophy, and motor axonal neuropathy were common findings. Compared to the most prevalent NBIA subtype, pantothenate kinase associated neurodegeneration (PKAN), individuals with two C19orf12 mutations were older at age of onset and the disease progressed more slowly. A polyclonal antibody against the predicted membrane spanning protein showed a mitochondrial localization. A histopathological examination in a single autopsy case detected Lewy bodies, tangles, spheroids, and tau pathology. The mitochondrial localization together with the immunohistopathological findings suggests a pathomechanistic overlap with common forms of neurodegenerative disorders.

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Figures

Figure 1
Figure 1
Pedigree of the NBIA Family Used for Homozygosity Mapping Mutated and nonmutated alleles are indicated.
Figure 2
Figure 2
Gene Structure and Identified Disease Alleles Gene structure of the two isoforms of C19orf12 with the identified mutations. The predicted transmembrane domain is marked in yellow. Mutation nomenclature of the C19orf12 gene is based on splice variant 1 (NM_001031726.2). RefSeq accession number of splice variant 2 is NM_031448.3.
Figure 3
Figure 3
Evolutionary Conservation of C19orf12 Multiple sequences of C19orf12 orthologs were aligned with CLUSTALW2. Amino acids are indicated as identical (red), highly similar (green), and similar (blue). The predicted transmembrane domain is marked in yellow.
Figure 4
Figure 4
Magnetic Resonance Images of Cases with the Homozygous C19orf12 Deletion c.204_214del11, p.Gly69ArgfsX10 Axial T2-weighted magnetic resonance imaging (1.5 T) shows a bilateral hypointensity of the globus pallidus (A) and substantia nigra (B).
Figure 5
Figure 5
Brain Histopathology of an Individual with the Homozygous C19orf12 Missense Mutation c.205G>A, p.Gly69Arg, p.Gly69Arg (A) Hematoxylin and eosin staining and (B) Prussian blue staining of the globus pallidus showed iron-containing deposits in neurons (insert in B) that are more diffusely distributed in astrocytes and very dense in perivascular macrophages (arrowhead in A) as well as many axonal spheroids (arrows in A) that were stained faintly by antibodies against APP (insert in B). Spheroids were found in the globus pallidus, putamen, and caudate nucleus, and at a lower density in the thalamus, internal capsule, brainstem, cerebral cortex, dentate nucleus, and spinal cord. Numerous α-synuclein-positive Lewy bodies, Lewy body-like inclusions, and some Lewy neurites were detected in the frontal cortex (C) and other neocortical areas; the hippocampus was less severely affected. Similar histopathology with Lewy bodies and Lewy body-like inclusions was found in the brain stem, including the substantia nigra, basal ganglia, cortex, and spinal cord (not shown). Some seemingly extracellular α-synuclein-positive deposits were noted in various areas (D, showing the external capsule and claustrum). Hyperphosphorylated tau-containing neuronal inclusions were identified in the hippocampus (E). The tau protein often seemed densely packed around pyramidal cell nuclei as is sometimes observed in tauopathies (F). Only a very small number of tau-positive inclusions stained with silver staining methods (Bodian, Bielschowsky, Gallyas) but did not show fibrils. Tufted astrocytes or coiled bodies were not seen. No neurofibrillary tangels (NFT) were seen in the globus pallidus or the substantia nigra. However, tau-positive extracellular punctuate and globular or irregularly shaped structures were found widely distributed in the hippocampus and the neocortex. In some instances these structures seemed to be associated with astrocytes.
Figure 6
Figure 6
Subcellular Localization of C19orf12 A C19orf12-GFP fusion protein (upper α-synuclein-positive deposits were noted in various areas [E]) and C19orf12 untagged protein (lower panel) exhibit a mitochondrial localization in transiently transfected and in stably transduced fibroblasts, respectively. Mitochondria were stained with mitochondrial single strand binding protein (anti-mtSSBP; red) or anti-porin (green). Nuclear DNA was stained with DAPI (blue).
Figure 7
Figure 7
Subcellular Localization of C19orf12 in Mitochondria NDHF-neo cells were harvested to obtain mitochondria, ER, and cytosol fractions. Equal amount of proteins (20 μg) from each fraction were resolved by SDS-PAGE and immunoblotted for C19orf12 with an antibody against the whole protein. Porin and calnexin were used as a loading control of inner mitochondrial membrane proteins and endoplasmatic reticulum, respectively.

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