Name: rs343
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs343

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr8:19953276 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.086131 (22798/264690, TOPMED)
A=0.098370 (24640/250484, GnomAD_exome)
A=0.091178 (13894/152384, ALFA) (+ 23 more)
A=0.080445 (11274/140146, GnomAD)
A=0.096451 (11430/118506, ExAC)
A=0.13586 (3839/28258, 14KJPN)
A=0.13932 (2335/16760, 8.3KJPN)
A=0.07189 (935/13006, GO-ESP)
A=0.1040 (666/6404, 1000G_30x)
A=0.1028 (515/5008, 1000G)
A=0.0625 (280/4480, Estonian)
A=0.0890 (343/3854, ALSPAC)
A=0.0844 (313/3708, TWINSUK)
A=0.1383 (404/2922, KOREAN)
A=0.1250 (229/1832, Korea1K)
A=0.0906 (154/1700, HapMap)
A=0.072 (72/998, GoNL)
A=0.139 (87/626, Chileans)
A=0.065 (39/600, NorthernSweden)
A=0.069 (37/534, MGP)
A=0.102 (22/216, Qatari)
A=0.160 (34/212, Vietnamese)
C=0.404 (46/114, SGDP_PRJ)
A=0.12 (5/40, GENOME_DK)
C=0.50 (6/12, Siberian)
A=0.50 (6/12, Siberian)

Clinical Significance: Reported in ClinVar
Gene : Consequence: LPL : Intron Variant
Publications: 4 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	152384	C=0.908822	A=0.091178	0.826701	0.009056	0.164243	4
European	Sub	127152	C=0.910312	A=0.089688	0.829086	0.008462	0.162451	1
African	Sub	6458	C=0.9464	A=0.0536	0.896253	0.003407	0.100341	0
African Others	Sub	220	C=0.959	A=0.041	0.918182	0.0	0.081818	0
African American	Sub	6238	C=0.9460	A=0.0540	0.895479	0.003527	0.100994	0
Asian	Sub	444	C=0.885	A=0.115	0.774775	0.004505	0.220721	1
East Asian	Sub	282	C=0.865	A=0.135	0.737589	0.007092	0.255319	1
Other Asian	Sub	162	C=0.920	A=0.080	0.839506	0.0	0.160494	0
Latin American 1	Sub	860	C=0.915	A=0.085	0.846512	0.016279	0.137209	4
Latin American 2	Sub	8204	C=0.8676	A=0.1324	0.755241	0.01999	0.224768	1
South Asian	Sub	178	C=0.865	A=0.135	0.764045	0.033708	0.202247	1
Other	Sub	9088	C=0.8999	A=0.1001	0.810299	0.010563	0.179137	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.913869	A=0.086131
gnomAD - Exomes	Global	Study-wide	250484	C=0.901630	A=0.098370
gnomAD - Exomes	European	Sub	134834	C=0.921363	A=0.078637
gnomAD - Exomes	Asian	Sub	48858	C=0.86008	A=0.13992
gnomAD - Exomes	American	Sub	34424	C=0.87172	A=0.12828
gnomAD - Exomes	African	Sub	16194	C=0.95017	A=0.04983
gnomAD - Exomes	Ashkenazi Jewish	Sub	10066	C=0.86340	A=0.13660
gnomAD - Exomes	Other	Sub	6108	C=0.9013	A=0.0987
Allele Frequency Aggregator	Total	Global	152384	C=0.908822	A=0.091178
Allele Frequency Aggregator	European	Sub	127152	C=0.910312	A=0.089688
Allele Frequency Aggregator	Other	Sub	9088	C=0.8999	A=0.1001
Allele Frequency Aggregator	Latin American 2	Sub	8204	C=0.8676	A=0.1324
Allele Frequency Aggregator	African	Sub	6458	C=0.9464	A=0.0536
Allele Frequency Aggregator	Latin American 1	Sub	860	C=0.915	A=0.085
Allele Frequency Aggregator	Asian	Sub	444	C=0.885	A=0.115
Allele Frequency Aggregator	South Asian	Sub	178	C=0.865	A=0.135
gnomAD - Genomes	Global	Study-wide	140146	C=0.919555	A=0.080445
gnomAD - Genomes	European	Sub	75910	C=0.91917	A=0.08083
gnomAD - Genomes	African	Sub	41990	C=0.94796	A=0.05204
gnomAD - Genomes	American	Sub	13640	C=0.86745	A=0.13255
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	C=0.8592	A=0.1408
gnomAD - Genomes	East Asian	Sub	3130	C=0.8473	A=0.1527
gnomAD - Genomes	Other	Sub	2152	C=0.9075	A=0.0925
ExAC	Global	Study-wide	118506	C=0.903549	A=0.096451
ExAC	Europe	Sub	71798	C=0.91703	A=0.08297
ExAC	Asian	Sub	24516	C=0.85907	A=0.14093
ExAC	American	Sub	11200	C=0.87277	A=0.12723
ExAC	African	Sub	10096	C=0.94889	A=0.05111
ExAC	Other	Sub	896	C=0.914	A=0.086
14KJPN	JAPANESE	Study-wide	28258	C=0.86414	A=0.13586
8.3KJPN	JAPANESE	Study-wide	16760	C=0.86068	A=0.13932
GO Exome Sequencing Project	Global	Study-wide	13006	C=0.92811	A=0.07189
GO Exome Sequencing Project	European American	Sub	8600	C=0.9155	A=0.0845
GO Exome Sequencing Project	African American	Sub	4406	C=0.9528	A=0.0472
1000Genomes_30x	Global	Study-wide	6404	C=0.8960	A=0.1040
1000Genomes_30x	African	Sub	1786	C=0.9619	A=0.0381
1000Genomes_30x	Europe	Sub	1266	C=0.8989	A=0.1011
1000Genomes_30x	South Asian	Sub	1202	C=0.8769	A=0.1231
1000Genomes_30x	East Asian	Sub	1170	C=0.8325	A=0.1675
1000Genomes_30x	American	Sub	980	C=0.871	A=0.129
1000Genomes	Global	Study-wide	5008	C=0.8972	A=0.1028
1000Genomes	African	Sub	1322	C=0.9629	A=0.0371
1000Genomes	East Asian	Sub	1008	C=0.8353	A=0.1647
1000Genomes	Europe	Sub	1006	C=0.9066	A=0.0934
1000Genomes	South Asian	Sub	978	C=0.877	A=0.123
1000Genomes	American	Sub	694	C=0.876	A=0.124
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.9375	A=0.0625
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.9110	A=0.0890
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.9156	A=0.0844
KOREAN population from KRGDB	KOREAN	Study-wide	2922	C=0.8617	A=0.1383
Korean Genome Project	KOREAN	Study-wide	1832	C=0.8750	A=0.1250
HapMap	Global	Study-wide	1700	C=0.9094	A=0.0906
HapMap	American	Sub	766	C=0.894	A=0.106
HapMap	African	Sub	506	C=0.968	A=0.032
HapMap	Asian	Sub	254	C=0.850	A=0.150
HapMap	Europe	Sub	174	C=0.891	A=0.109
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.928	A=0.072
Chileans	Chilean	Study-wide	626	C=0.861	A=0.139
Northern Sweden	ACPOP	Study-wide	600	C=0.935	A=0.065
Medical Genome Project healthy controls from Spanish population	Spanish controls	Study-wide	534	C=0.931	A=0.069
Qatari	Global	Study-wide	216	C=0.898	A=0.102
A Vietnamese Genetic Variation Database	Global	Study-wide	212	C=0.840	A=0.160
SGDP_PRJ	Global	Study-wide	114	C=0.404	A=0.596
The Danish reference pan genome	Danish	Study-wide	40	C=0.88	A=0.12
Siberian	Global	Study-wide	12	C=0.50	A=0.50

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 8	NC_000008.11:g.19953276C>A
GRCh37.p13 chr 8	NC_000008.10:g.19810787C>A
LPL RefSeqGene (LRG_1298)	NG_008855.2:g.56560C>A

Gene: LPL, lipoprotein lipase (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LPL transcript	NM_000237.3:c.430-34C>A	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: A (allele ID: 1220105 )

ClinVar Accession	Disease Names	Clinical Significance
RCV001614596.3	not provided	Benign

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A
GRCh38.p14 chr 8	NC_000008.11:g.19953276=	NC_000008.11:g.19953276C>A
GRCh37.p13 chr 8	NC_000008.10:g.19810787=	NC_000008.10:g.19810787C>A
LPL RefSeqGene (LRG_1298)	NG_008855.2:g.56560=	NG_008855.2:g.56560C>A
LPL transcript	NM_000237.2:c.430-34=	NM_000237.2:c.430-34C>A
LPL transcript	NM_000237.3:c.430-34=	NM_000237.3:c.430-34C>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

103 SubSNP, 25 Frequency, 1 ClinVar submissions

No	Submitter	Submission ID	Date (Build)
1	DEBNICK	ss344	Sep 19, 2000 (36)
2	WI_SSAHASNP	ss6804713	Feb 20, 2003 (111)
3	IMCJ-GDT	ss16343018	Feb 27, 2004 (120)
4	PERLEGEN	ss24421365	Sep 20, 2004 (123)
5	ILLUMINA	ss75139237	Dec 07, 2007 (129)
6	AFFY	ss76661873	Dec 07, 2007 (129)
7	KRIBB_YJKIM	ss80743679	Dec 15, 2007 (130)
8	HGSV	ss83741132	Dec 15, 2007 (130)
9	BGI	ss104512501	Dec 01, 2009 (131)
10	KRIBB_YJKIM	ss119336845	Dec 01, 2009 (131)
11	ILLUMINA	ss160621046	Dec 01, 2009 (131)
12	ILLUMINA	ss173587454	Jul 04, 2010 (132)
13	1000GENOMES	ss234352460	Jul 15, 2010 (132)
14	1000GENOMES	ss241227284	Jul 15, 2010 (132)
15	ILLUMINA	ss244294796	Jul 04, 2010 (132)
16	BL	ss254171378	May 09, 2011 (134)
17	GMI	ss279724005	May 04, 2012 (137)
18	ILLUMINA	ss410878517	Sep 17, 2011 (135)
19	ILLUMINA	ss480780937	May 04, 2012 (137)
20	ILLUMINA	ss480796791	May 04, 2012 (137)
21	ILLUMINA	ss481698816	Sep 08, 2015 (146)
22	ILLUMINA	ss485185202	May 04, 2012 (137)
23	1000GENOMES	ss490960909	May 04, 2012 (137)
24	ILLUMINA	ss537173600	Sep 08, 2015 (146)
25	SSMP	ss655035529	Apr 25, 2013 (138)
26	NHLBI-ESP	ss712829676	Apr 25, 2013 (138)
27	ILLUMINA	ss778518802	Sep 08, 2015 (146)
28	ILLUMINA	ss783038743	Sep 08, 2015 (146)
29	ILLUMINA	ss783998155	Sep 08, 2015 (146)
30	ILLUMINA	ss832296459	Sep 08, 2015 (146)
31	ILLUMINA	ss833975167	Sep 08, 2015 (146)
32	EVA-GONL	ss985272592	Aug 21, 2014 (142)
33	JMKIDD_LAB	ss1075339984	Aug 21, 2014 (142)
34	1000GENOMES	ss1328915042	Aug 21, 2014 (142)
35	DDI	ss1431441569	Apr 01, 2015 (144)
36	EVA_GENOME_DK	ss1582593740	Apr 01, 2015 (144)
37	EVA_DECODE	ss1594862252	Apr 01, 2015 (144)
38	EVA_UK10K_ALSPAC	ss1620133655	Apr 01, 2015 (144)
39	EVA_UK10K_TWINSUK	ss1663127688	Apr 01, 2015 (144)
40	EVA_EXAC	ss1689111435	Apr 01, 2015 (144)
41	EVA_MGP	ss1711194692	Apr 01, 2015 (144)
42	EVA_SVP	ss1713021082	Apr 01, 2015 (144)
43	ILLUMINA	ss1752723232	Sep 08, 2015 (146)
44	WEILL_CORNELL_DGM	ss1928562346	Feb 12, 2016 (147)
45	JJLAB	ss2024980534	Sep 14, 2016 (149)
46	USC_VALOUEV	ss2153201998	Dec 20, 2016 (150)
47	HUMAN_LONGEVITY	ss2301287753	Dec 20, 2016 (150)
48	SYSTEMSBIOZJU	ss2626975134	Nov 08, 2017 (151)
49	ILLUMINA	ss2634720435	Nov 08, 2017 (151)
50	GRF	ss2708962508	Nov 08, 2017 (151)
51	GNOMAD	ss2737022189	Nov 08, 2017 (151)
52	GNOMAD	ss2748007668	Nov 08, 2017 (151)
53	GNOMAD	ss2864092624	Nov 08, 2017 (151)
54	AFFY	ss2986076157	Nov 08, 2017 (151)
55	SWEGEN	ss3002804401	Nov 08, 2017 (151)
56	BIOINF_KMB_FNS_UNIBA	ss3026281090	Nov 08, 2017 (151)
57	CSHL	ss3348082013	Nov 08, 2017 (151)
58	ILLUMINA	ss3630013623	Oct 12, 2018 (152)
59	ILLUMINA	ss3632620986	Oct 12, 2018 (152)
60	ILLUMINA	ss3633493721	Oct 12, 2018 (152)
61	ILLUMINA	ss3634220167	Oct 12, 2018 (152)
62	ILLUMINA	ss3635162170	Oct 12, 2018 (152)
63	ILLUMINA	ss3635899137	Oct 12, 2018 (152)
64	ILLUMINA	ss3636899249	Oct 12, 2018 (152)
65	ILLUMINA	ss3637652276	Oct 12, 2018 (152)
66	ILLUMINA	ss3638748361	Oct 12, 2018 (152)
67	ILLUMINA	ss3640869460	Oct 12, 2018 (152)
68	ILLUMINA	ss3643680160	Oct 12, 2018 (152)
69	OMUKHERJEE_ADBS	ss3646373012	Oct 12, 2018 (152)
70	EGCUT_WGS	ss3670484429	Jul 13, 2019 (153)
71	EVA_DECODE	ss3721555407	Jul 13, 2019 (153)
72	ACPOP	ss3735467014	Jul 13, 2019 (153)
73	ILLUMINA	ss3745461953	Jul 13, 2019 (153)
74	EVA	ss3767717727	Jul 13, 2019 (153)
75	ILLUMINA	ss3772954546	Jul 13, 2019 (153)
76	KHV_HUMAN_GENOMES	ss3810881186	Jul 13, 2019 (153)
77	EVA	ss3824351375	Apr 26, 2020 (154)
78	EVA	ss3825737067	Apr 26, 2020 (154)
79	EVA	ss3831054886	Apr 26, 2020 (154)
80	SGDP_PRJ	ss3869436674	Apr 26, 2020 (154)
81	KRGDB	ss3916862504	Apr 26, 2020 (154)
82	KOGIC	ss3963402119	Apr 26, 2020 (154)
83	FSA-LAB	ss3984393679	Apr 27, 2021 (155)
84	FSA-LAB	ss3984393680	Apr 27, 2021 (155)
85	EVA	ss3986415457	Apr 27, 2021 (155)
86	EVA	ss4017379932	Apr 27, 2021 (155)
87	TOPMED	ss4778092284	Apr 27, 2021 (155)
88	TOMMO_GENOMICS	ss5187654346	Apr 27, 2021 (155)
89	1000G_HIGH_COVERAGE	ss5276330100	Oct 14, 2022 (156)
90	EVA	ss5315316828	Oct 14, 2022 (156)
91	EVA	ss5379642028	Oct 14, 2022 (156)
92	HUGCELL_USP	ss5472980726	Oct 14, 2022 (156)
93	EVA	ss5509275463	Oct 14, 2022 (156)
94	1000G_HIGH_COVERAGE	ss5566253918	Oct 14, 2022 (156)
95	EVA	ss5624176075	Oct 14, 2022 (156)
96	SANFORD_IMAGENETICS	ss5644923800	Oct 14, 2022 (156)
97	TOMMO_GENOMICS	ss5729270925	Oct 14, 2022 (156)
98	EVA	ss5799750254	Oct 14, 2022 (156)
99	YY_MCH	ss5809516717	Oct 14, 2022 (156)
100	EVA	ss5830224439	Oct 14, 2022 (156)
101	EVA	ss5848702256	Oct 14, 2022 (156)
102	EVA	ss5888021411	Oct 14, 2022 (156)
103	EVA	ss5974104283	Oct 14, 2022 (156)
104	1000Genomes	NC_000008.10 - 19810787	Oct 12, 2018 (152)
105	1000Genomes_30x	NC_000008.11 - 19953276	Oct 14, 2022 (156)
106	The Avon Longitudinal Study of Parents and Children	NC_000008.10 - 19810787	Oct 12, 2018 (152)
107	Chileans	NC_000008.10 - 19810787	Apr 26, 2020 (154)
108	Genetic variation in the Estonian population	NC_000008.10 - 19810787	Oct 12, 2018 (152)
109	ExAC	NC_000008.10 - 19810787	Oct 12, 2018 (152)
110	The Danish reference pan genome	NC_000008.10 - 19810787	Apr 26, 2020 (154)
111	gnomAD - Genomes	NC_000008.11 - 19953276	Apr 27, 2021 (155)
112	gnomAD - Exomes	NC_000008.10 - 19810787	Jul 13, 2019 (153)
113	GO Exome Sequencing Project	NC_000008.10 - 19810787	Oct 12, 2018 (152)
114	Genome of the Netherlands Release 5	NC_000008.10 - 19810787	Apr 26, 2020 (154)
115	HapMap	NC_000008.11 - 19953276	Apr 26, 2020 (154)
116	KOREAN population from KRGDB	NC_000008.10 - 19810787	Apr 26, 2020 (154)
117	Korean Genome Project	NC_000008.11 - 19953276	Apr 26, 2020 (154)
118	Medical Genome Project healthy controls from Spanish population	NC_000008.10 - 19810787	Apr 26, 2020 (154)
119	Northern Sweden	NC_000008.10 - 19810787	Jul 13, 2019 (153)
120	Qatari	NC_000008.10 - 19810787	Apr 26, 2020 (154)
121	SGDP_PRJ	NC_000008.10 - 19810787	Apr 26, 2020 (154)
122	Siberian	NC_000008.10 - 19810787	Apr 26, 2020 (154)
123	8.3KJPN	NC_000008.10 - 19810787	Apr 27, 2021 (155)
124	14KJPN	NC_000008.11 - 19953276	Oct 14, 2022 (156)
125	TopMed	NC_000008.11 - 19953276	Apr 27, 2021 (155)
126	UK 10K study - Twins	NC_000008.10 - 19810787	Oct 12, 2018 (152)
127	A Vietnamese Genetic Variation Database	NC_000008.10 - 19810787	Jul 13, 2019 (153)
128	ALFA	NC_000008.11 - 19953276	Apr 27, 2021 (155)
129	ClinVar	RCV001614596.3	Oct 14, 2022 (156)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs17278080	Oct 08, 2004 (123)
rs59893879	May 25, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss76661873, ss83741132, ss254171378, ss279724005, ss480780937, ss1594862252, ss1713021082, ss3643680160	NC_000008.9:19855066:C:A	NC_000008.11:19953275:C:A	(self)
41009782, 22797044, 429635, 16222677, 9205021, 8758678, 6190552, 809229, 10186908, 24039898, 310452, 8751879, 10604276, 21453654, 5718352, 45623653, 22797044, 5083450, ss234352460, ss241227284, ss480796791, ss481698816, ss485185202, ss490960909, ss537173600, ss655035529, ss712829676, ss778518802, ss783038743, ss783998155, ss832296459, ss833975167, ss985272592, ss1075339984, ss1328915042, ss1431441569, ss1582593740, ss1620133655, ss1663127688, ss1689111435, ss1711194692, ss1752723232, ss1928562346, ss2024980534, ss2153201998, ss2626975134, ss2634720435, ss2708962508, ss2737022189, ss2748007668, ss2864092624, ss2986076157, ss3002804401, ss3348082013, ss3630013623, ss3632620986, ss3633493721, ss3634220167, ss3635162170, ss3635899137, ss3636899249, ss3637652276, ss3638748361, ss3640869460, ss3646373012, ss3670484429, ss3735467014, ss3745461953, ss3767717727, ss3772954546, ss3824351375, ss3825737067, ss3831054886, ss3869436674, ss3916862504, ss3984393679, ss3984393680, ss3986415457, ss4017379932, ss5187654346, ss5315316828, ss5379642028, ss5509275463, ss5624176075, ss5644923800, ss5799750254, ss5830224439, ss5848702256, ss5974104283	NC_000008.10:19810786:C:A	NC_000008.11:19953275:C:A	(self)
RCV001614596.3, 53779853, 289194323, 3580962, 19780120, 63108029, 615469844, 7846304687, ss2301287753, ss3026281090, ss3721555407, ss3810881186, ss3963402119, ss4778092284, ss5276330100, ss5472980726, ss5566253918, ss5729270925, ss5809516717, ss5888021411	NC_000008.11:19953275:C:A	NC_000008.11:19953275:C:A	(self)
ss344, ss6804713, ss16343018, ss24421365, ss75139237, ss80743679, ss104512501, ss119336845, ss160621046, ss173587454, ss244294796, ss410878517	NT_167187.1:7668932:C:A	NC_000008.11:19953275:C:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

4 citations for rs343

PMID	Title	Author	Year	Journal
18985010	Association of lipoprotein lipase (LPL) single nucleotide polymorphisms with type 2 diabetes mellitus.	Cho YS et al.	2008	Experimental & molecular medicine
19148283	Genetic differences between the determinants of lipid profile phenotypes in African and European Americans: the Jackson Heart Study.	Deo RC et al.	2009	PLoS genetics
20416077	Identification of type 2 diabetes-associated combination of SNPs using support vector machine.	Ban HJ et al.	2010	BMC genetics
23105935	Interaction Effects of Lipoprotein Lipase Polymorphisms with Lifestyle on Lipid Levels in a Korean Population: A Cross-sectional Study.	Pyun JA et al.	2012	Genomics & informatics

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs343