Entry - #300958 - INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, SNIJDERS BLOK TYPE; MRXSSB - OMIM
# 300958

INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, SNIJDERS BLOK TYPE; MRXSSB


Alternative titles; symbols

MENTAL RETARDATION, X-LINKED 102, FORMERLY; MRX102, FORMERLY


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
Xp11.4 Intellectual developmental disorder, X-linked syndromic, Snijders Blok type 300958 XLD, XLR 3 DDX3X 300160
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- X-linked dominant
- X-linked recessive
GROWTH
Weight
- Low weight
Other
- Intrauterine growth retardation
- Failure to thrive
HEAD & NECK
Head
- Microcephaly
- Macrocephaly
- Plagiocephaly
- Brachycephaly
Face
- Dysmorphic facial features
- Frontal bossing
- Long face
- Hypotonic face
- Smooth philtrum
- Long philtrum
Ears
- Hearing loss
- Recurrent otitis media
Eyes
- Visual problems
- Deep-set eyes
- Hypertelorism
- Strabismus
- Cataracts
- Upslanting palpebral fissures
Nose
- Wide nasal bridge
- Bulbous nasal tip
- Narrow alae nasi
- Anteverted nares Low columella
Mouth
- Cleft lip
- Cleft palate
- Thin upper lip
- High-arched palate
CARDIOVASCULAR
Heart
- Atrial septal defect
- Ventricular septal defect
- Patent ductus arteriosus
ABDOMEN
Gastrointestinal
- Feeding problems
- Gastroesophageal reflux (GER)
SKELETAL
- Joint hyperlaxity
Spine
- Scoliosis
SKIN, NAILS, & HAIR
Skin
- Pigmentation abnormalities
MUSCLE, SOFT TISSUES
- Hypotonia
NEUROLOGIC
Central Nervous System
- Intellectual disability, variable
- Developmental delay
- Dystonia
- Seizures
- Movement disorders
- Dyskinesia
- Wide-based gait
- Spasticity
- Corpus callosum hypoplasia
- Enlarged ventricles
- Cortical malformations
Behavioral Psychiatric Manifestations
- Autism spectrum disorder
- Hyperactivity
- Aggression
- Self-injurious behavior
ENDOCRINE FEATURES
- Precocious puberty
PRENATAL MANIFESTATIONS
- Nuchal thickening
Amniotic Fluid
- Oligohydramnios
Maternal
- Pregnancy induced hypertension
MISCELLANEOUS
- Onset in infancy
- No consistent dysmorphic facial phenotype
- Affected girls have de novo heterozygous mutations consistent with X-linked dominant inheritance
MOLECULAR BASIS
- Caused by mutation in the DEAD-box helicase 3, X-linked gene (DDX3X, 300160.0001)
Intellectual developmental disorder, X-linked syndromic - PS309510 - 56 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
Xp22.2 Raynaud-Claes syndrome XLD 3 300114 CLCN4 302910
Xp22.2 Basilicata-Akhtar syndrome XLD 3 301032 MSL3 300609
Xp22.2 Intellectual developmental disorder, X-linked syndromic, Pilorge type XL 3 301076 GLRA2 305990
Xp22.2 Pettigrew syndrome XLR 3 304340 AP1S2 300629
Xp22.12 Intellectual developmental disorder, X-linked syndromic, Houge type XL 3 301008 CNKSR2 300724
Xp22.11 Intellectual developmental disorder, X-linked syndromic, Snyder-Robinson type XLR 3 309583 SMS 300105
Xp22.11 MEHMO syndrome XLR 3 300148 EIF2S3 300161
Xp22.11 Intellectual developmental disorder, X-linked syndromic 37 XL 3 301118 ZFX 314980
Xp22.11-p21.3 Van Esch-O'Driscoll syndrome XLR 3 301030 POLA1 312040
Xp21.3 Partington syndrome XLR 3 309510 ARX 300382
Xp21.1-p11.23 Intellectual developmental disorder, X-linked syndromic 17 XLR 2 300858 MRXS17 300858
Xp11 ?Intellectual developmental disorder, X-linked syndromic 12 XL 2 309545 MRXS12 309545
Xp11.4 Intellectual developmental disorder, X-linked syndromic, Hedera type XLR 3 300423 ATP6AP2 300556
Xp11.4 Intellectual developmental disorder, X-linked syndromic, Snijders Blok type XLD, XLR 3 300958 DDX3X 300160
Xp11.4 Intellectual developmental disorder and microcephaly with pontine and cerebellar hypoplasia XL 3 300749 CASK 300172
Xp11.3-q22 Intellectual developmental disorder, X-linked syndromic 7 XL 2 300218 MRXS7 300218
Xp11.2 Intellectual developmental disorder, X-linked, syndromic, Stocco dos Santos type XL 2 300434 SDSX 300434
Xp11.23 Renpenning syndrome XLR 3 309500 PQBP1 300463
Xp11.22 Intellectual developmental disorder, X-linked syndromic, Claes-Jensen type XLR 3 300534 KDM5C 314690
Xp11.22 Intellectual developmental disorder, X-linked syndromic, Turner type XL 3 309590 HUWE1 300697
Xp11.22 Intellectual developmental disorder, X-linked syndromic, Siderius type XLR 3 300263 PHF8 300560
Xp11.22 Prieto syndrome XLR 3 309610 WNK3 300358
Xp11.22 Aarskog-Scott syndrome XLR 3 305400 FGD1 300546
Xp11.22 Intellectual developmental disorder, X-linked syndromic 16 XLR 3 305400 FGD1 300546
Xq11.2 Wieacker-Wolff syndrome XLR 3 314580 ZC4H2 300897
Xq12-q21.31 Intellectual developmental disorder, X-linked syndromic 9 2 300709 MRXS9 300709
Xq12 Wilson-Turner syndrome XLR 3 309585 LAS1L 300964
Xq12 Intellectual developmental disorder, X-linked syndromic, Billuart type XLR 3 300486 OPHN1 300127
Xq13-q21 Martin-Probst syndrome XLR 2 300519 MRXSMP 300519
Xq13.1 ?Corpus callosum, agenesis of, with impaired intellectual development, ocular coloboma and micrognathia XLR 3 300472 IGBP1 300139
Xq13.1 Lujan-Fryns syndrome XLR 3 309520 MED12 300188
Xq13.1 Intellectual developmental disorder, X-linked syndromic 34 XL 3 300967 NONO 300084
Xq13.1 Intellectual developmental disorder, X-linked syndromic 33 XLR 3 300966 TAF1 313650
Xq13.2 Intellectual developmental disorder, X-linked syndromic, Abidi type XL 2 300262 MRXSAB 300262
Xq13.2 Tonne-Kalscheuer syndrome XL 3 300978 RLIM 300379
Xq21.33-q23 Intellectual developmental disorder, X-linked syndromic, Chudley-Schwartz type XLR 2 300861 MRXSCS 300861
Xq22.1 Intellectual developmental disorder, X-linked syndromic, Bain type XLD 3 300986 HNRNPH2 300610
Xq22.3 Arts syndrome XLR 3 301835 PRPS1 311850
Xq24 Intellectual developmental disorder, X-linked syndromic, Nascimento type XLR 3 300860 UBE2A 312180
Xq24 Intellectual developmental disorder, X-linked syndromic 14 XLR 3 300676 UPF3B 300298
Xq24 Intellectual developmental disorder, X-linked syndromic, Hackman-Di Donato type XLR 3 301039 NKAP 300766
Xq24 Intellectual developmental disorder, X-linked syndromic, Cabezas type XLR 3 300354 CUL4B 300304
Xq25 Intellectual developmental disorder, X-linked syndromic, Wu type XLR 3 300699 GRIA3 305915
Xq26.1 Intellectual developmental disorder, X-linked syndromic, Raymond type XL 3 300799 ZDHHC9 300646
Xq26.2 ?Paganini-Miozzo syndrome XLR 3 301025 HS6ST2 300545
Xq26.2 Borjeson-Forssman-Lehmann syndrome XLR 3 301900 PHF6 300414
Xq26.3 Intellectual developmental disorder, X-linked syndromic, Christianson type XL 3 300243 SLC9A6 300231
Xq26.3 ?Intellectual developmental disorder, X-linked syndromic, Shashi type XLR 3 300238 RBMX 300199
Xq26.3 ?Intellectual developmental disorder, X-linked syndromic, Gustavson type XLR 3 309555 RBMX 300199
Xq27.3 Fragile X syndrome XLD 3 300624 FMR1 309550
Xq28 Intellectual developmental disorder, X-linked 109 XLR 3 309548 AFF2 300806
Xq28 Intellectual developmental disorder, X-linked syndromic, Lubs type XLR 3 300260 MECP2 300005
Xq28 Intellectual developmental disorder, X-linked syndromic 13 XLR 3 300055 MECP2 300005
Xq28 Intellectual developmental disorder, X-linked syndromic 35 XLR 3 300998 RPL10 312173
Xq28 Intellectual developmental disorder, X-linked syndromic, Armfield type XLR 3 300261 FAM50A 300453
Chr.X Intellectual developmental disorder, X-linked, syndromic 32 XLR 2 300886 MRXS32 300886

TEXT

A number sign (#) is used with this entry because of evidence that the Snijders Blok type of X-linked syndromic intellectual developmental disorder (MRXSSB) is caused by heterozygous or hemizygous mutation in the DDX3X gene (300160) on Xp11.


Description

Syndromic X-linked intellectual developmental disorder of the Snijders Blok type (MRXSSB), which occurs predominantly in females, is characterized by mildly to severely impaired intellectual development with variable other features including brain abnormalities, microcephaly, hypotonia, movement disorder and/or spasticity, ventricular enlargement, hypoplasia, and behavioral problems (Snijders Blok et al., 2015; Nicola et al., 2019).


Clinical Features

Snijders Blok et al. (2015) reported 38 females with mildly to severely impaired intellectual development and variable neurologic features, including hypotonia in 12 (76%), movement disorders comprising dyskinesia, spasticity, and stiff-legged or wide-based gait in 17 (45%), microcephaly in 12 (32%), behavioral problems such as autism spectrum disorder, hyperactivity, and aggression in 20 (53%), and epilepsy in 6 (16%). Additional variable nonneurologic features included joint hyperlaxity, skin pigmentary abnormalities, cleft lip and/or palate, hearing and visual impairment, and precocious puberty. Some patients had abnormal brain imaging findings, such as corpus callosum hypoplasia (35%), ventricular enlargement (35%), and evidence of cortical dysplasia (4 patients). Although common dysmorphic facial features were noted, there was no consistent recognizable phenotype. Five males from 3 additional, unrelated families also had MRXSSB. Features included mild to severe intellectual disability, movement disorders, such as spasticity, behavior problems, and variable dysmorphic features. Carrier females in these 3 families were unaffected.

Kellaris et al. (2018) described 2 brothers with mildly to moderately impaired intellectual development, macrocephaly, and progressive spasticity. The eldest brother had dysarthria and progressive spastic paraparesis. He lost the ability to ambulate independently at age 21. The younger brother had a progressive spastic paraparesis and tremor with a learning disability/mixed expressive-receptive language disorder. Both showed similar brain MRI findings: prominent lateral ventricles and cortical sulci and symmetric, confluent periventricular T2-hyperintensity in the supratentorial white matter suggesting central white matter loss.

Nicola et al. (2019) studied 3 unrelated boys with impaired intellectual development requiring special education support. The first patient was a 9-year-old boy with mildly to moderately impaired intellectual development. A prenatal ultrasound revealed nuchal thickening. He had a history of atrial septal defect (ASD), patent ductus arteriosus (PDA), and feeding problems as an infant. The second patient was an 8-year-old boy with moderately impaired intellectual development and hyperactive, aggressive behavior. He was diagnosed with cyanotic heart disease (pulmonary atresia, ventral septal defect, and confluent branch pulmonary arteries) as a neonate and required a modified Blalock-Taussig shunt. The third patient was a 16-year-old boy with severely impaired intellectual development and pulmonary stenosis. All had involuntary movements, although this had resolved in patient 1. Two patients had hearing issues (recurrent otitis or conductive hearing loss) and ophthalmologic issues (cataracts, myopia). Nicola et al. (2019) recommended screening for cardiac anomalies as well as ophthalmologic and hearing surveillance in males identified with DDX3X variants.

Scala et al. (2019) described 3 unrelated females with severely impaired intellectual development, dysmorphic features, and central nervous system malformations. Patient 1 was an 11-year-old girl with a history of global developmental delay, absent speech, spastic tetraparesis, and severe scoliosis. She was incidentally diagnosed with a pilocytic astrocytoma at age 8. Patient 2 was a 2-year-old girl with a prenatal history of intrauterine growth retardation (IUGR), increased nuchal translucency, ventriculomegaly, and oligohydramnios. Postnatally, she had diffuse hypotonia, feeding problems, sensorineural hearing loss, microcephaly, and severe developmental delay. Patient 3 was a 10-year-old nonverbal girl with a history of IUGR, akinetic seizures, hand stereotypies, and microcephaly. Brain MRI studies revealed similar malformations in all 3 girls. The findings were characterized by bilateral frontal polymicrogyria (patients 1 and 3), variable degrees of corpus callosal hypodysgenesis, dysmorphic basal ganglia, small olfactory bulbs, and pontine and inferior vermis hypoplasia. White matter was globally reduced with consequent enlargement of the lateral ventricles.

Beal et al. (2019) analyzed 6 females from 5 unrelated families with impaired intellectual development. Common facial dysmorphisms in this cohort included short palpebral fissures, micrognathia, bulbous nasal tip, protruding ears, high-arched palate, thin upper vermilion, and smooth philtrum. Novel clinical features included dystonia in one patient and cyclical vomiting syndrome in another. Patient 6 was reported to have cutaneous mastocytosis; the authors noted that although this diagnosis may be unrelated to DDX3X, the Wnt-beta catenin (see 116806) pathway is known to be impaired in DDX3X and plays a role in the maintenance and differentiation of mast cells.

Chanes et al. (2019) described a 10-year-old girl born at 25 weeks' gestation following an emergency cesarian section for severe preeclampsia. She was referred for a genetics evaluation at age 19.5 months with a diagnosis of cerebral palsy. Physical examination was notable for microcephaly, dolichocephaly, epicanthal folds, telecanthus, large ears, and hypopigmented spots on the chest and abdomen. At age 6, she was diagnosed with global cognitive delays, attention deficit-hyperactivity disorder, and possible autism. Follow-up examination at age 10 revealed a normal head circumference, dolichostenomelic appearance, joint hypermobility, and a long face with broad nasal bridge, anteverted nares, and telecanthus. Pigmentary abnormalities were still present on her chest and abdomen. MRI revealed a thin corpus callosum, prominent prepontine cistern, vertical clivus, and prominent ventricles.


Inheritance

The transmission pattern of MRXSSB in 38 females from 35 families reported by Snijders Blok et al. (2015) was consistent with X-linked dominant inheritance. All reported DDX3X mutations in females have occurred de novo (Nicola et al., 2019).

The transmission pattern of MRXSSB in males in 3 families reported by Snijders Blok et al. (2015) was consistent with X-linked recessive inheritance. Carrier females in these families were unaffected. DDX3X mutations in some males have been reported to occur de novo (Nicola et al., 2019).


Molecular Genetics

Snijders Blok et al. (2015) identified 35 different de novo heterozygous mutations in the DDX3X gene (see, e.g., 300160.0001-300160.0004) in 38 girls with MRXSSB. The mutations were found by whole-exome sequencing of 3 large cohorts of patients referred for testing (including the Deciphering Developmental Disorders Study, 2015); DDX3X mutations were found in 1 to 3% of these patient cohorts, rendering it one of the most common causes of intellectual disability in females. Nineteen of the mutations were predicted to cause complete loss of function, resulting in haploinsufficiency in the female patients. In vitro cellular functional expression studies and in vivo studies in zebrafish of some of the identified missense mutations showed that they caused a loss of function in the canonical WNT signaling pathway with a disruption of beta-catenin signaling. There was no evidence for a dominant-negative effect; Snijders Blok et al. (2015) postulated haploinsufficiency as the disease mechanism. De novo variants were not found in any male patients who were part of the cohorts, but affected males in 3 families were found to carry hemizygous missense mutations in the DDX3X gene (see, e.g., 300160.0005) that were inherited from an unaffected mother. Functional studies revealed no differences of the male mutant alleles from wildtype, but Snijders Blok et al. (2015) speculated that they were pathogenic and that the effect of the mutant alleles was beyond the detection range of the assays. The results were consistent with the hypothesis that DDX3X is dosage sensitive and may have differential activity in females than in males.

By whole-exome sequencing, Kellaris et al. (2018) identified a maternally inherited missense mutation (R79K; 300160.0006) in the DDX3X gene in 2 brothers with MRXSSB. Functional testing of DDX3X activity in zebrafish embryos showed that the allele causes a partial loss of DDX3X function, indicating a hypomorphic variant.

In 3 unrelated males with MRXSSB, Nicola et al. (2019) identified hemizygous missense mutations in the DDX3X gene (see, e.g., R376H, 300160.0007 and V496M, 300160.0008). The mutations, which were found by exome sequencing and confirmed by Sanger sequencing, occurred de novo in 2 of the patients. Nicola et al. (2019) proposed that de novo DDX3X mutations are not necessarily male lethal and therefore should be considered as a cause of syndromic impaired intellectual development in both males and females.

Scala et al. (2019) identified 3 different de novo heterozygous mutations in the DDX3X in 3 unrelated females with MRXSSB (300160.0009-300160.0011). The mutations were found by whole-exome sequencing and confirmed by Sanger sequencing.

By whole-exome sequencing, Beal et al. (2019) identified 5 novel heterozygous DDX3X mutations (4 frameshifts and 1 splice site) in 6 females with MRXSSB from 5 unrelated families. Two sibs had the same frameshift mutation (300160.0012); parental testing for the mutation was negative, suggesting germline mosaicism. Although both girls had impaired intellectual development, the older sister was more severely affected.

By exome sequencing, Chanes et al. (2019) identified a de novo heterozygous frameshift mutation (300160.0013) in the DDX3X gene in a 10-year-old girl with MRXSSB.


REFERENCES

  1. Beal, B., Hayes, I., McGaughran, J., Amor, D. J., Miteff, C., Jackson, V., van Reyk, O., Subramanian, G., Hildebrand, M. S., Morgan, A. T., Goel, H. Expansion of phenotype of DDX3X syndrome: six new cases. Clin. Dysmorph. 28: 169-174, 2019. [PubMed: 31274575, related citations] [Full Text]

  2. Chanes, N. M., Wong, J., Lacassie, Y. Further delineation of DDX3X syndrome. Clin. Dysmorph. 28: 149-151, 2019. [PubMed: 30817323, related citations] [Full Text]

  3. Deciphering Developmental Disorders Study. Large-scale discovery of novel genetic causes of developmental disorders. Nature 519: 223-228, 2015. [PubMed: 25533962, images, related citations] [Full Text]

  4. Kellaris, G., Khan, K., Baig, S. M., Tsai, I.-C., Zamora, F. M., Ruggieri, P., Natowicz, M. R., Katsanis, N. A hypomorphic inherited pathogenic variant in DDX3X causes male intellectual disability with additional neurodevelopmental and neurodegenerative features. Hum. Genomics 12: 11, 2018. Note: Electronic Article. [PubMed: 29490693, images, related citations] [Full Text]

  5. Nicola, P., Blackburn, P. R., Rasmussen, K. J., Bertsch, N. L., Klee, E. W., Hasadsri, L., Pichurin, P. N., Rankin, J., Raymond, F. L., DDD Study, Clayton-Smith, J. De novo DDX3X missense variants in males appear viable and contribute to syndromic intellectual disability. Am. J. Med. Genet. 179A: 570-578, 2019. [PubMed: 30734472, related citations] [Full Text]

  6. Scala, M., Torella, A., Severino, M., Morana, G., Castello, R., Accogli, A., Verrico, A., Vari, M. S., Cappuccio, G., Pinelli, M., Vitiello, G., Terrone, G., D'Amico, A., TUDP Consortium, Nigro, V., Capra, V. Three de novo DDX3X variants associated with distinctive brain developmental abnormalities and brain tumor in intellectually disabled females. Europ. J. Hum. Genet. 27: 1254-1259, 2019. [PubMed: 30936465, related citations] [Full Text]

  7. Snijders Blok, L., Madsen, E., Juusola, J., Gilissen, C., Baralle, D., Reijnders, M. R. F., Venselaar, H., Helsmoortel, C., Cho, M. T., Hoischen, A., Vissers, L. E. L. M., Koemans, T. S., and 74 others. Mutations in DDX3X are a common cause of unexplained intellectual disability with gender-specific effects on Wnt signaling. Am. J. Hum. Genet. 97: 343-352, 2015. [PubMed: 26235985, images, related citations] [Full Text]


Contributors:
Kelly A. Przylepa - updated : 05/07/2020
Creation Date:
Cassandra L. Kniffin : 8/31/2015
alopez : 12/15/2023
carol : 05/13/2021
carol : 05/07/2020
carol : 07/03/2017
carol : 09/04/2015
ckniffin : 9/1/2015

# 300958

INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, SNIJDERS BLOK TYPE; MRXSSB


Alternative titles; symbols

MENTAL RETARDATION, X-LINKED 102, FORMERLY; MRX102, FORMERLY


ORPHA: 457260;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
Xp11.4 Intellectual developmental disorder, X-linked syndromic, Snijders Blok type 300958 X-linked dominant; X-linked recessive 3 DDX3X 300160

TEXT

A number sign (#) is used with this entry because of evidence that the Snijders Blok type of X-linked syndromic intellectual developmental disorder (MRXSSB) is caused by heterozygous or hemizygous mutation in the DDX3X gene (300160) on Xp11.


Description

Syndromic X-linked intellectual developmental disorder of the Snijders Blok type (MRXSSB), which occurs predominantly in females, is characterized by mildly to severely impaired intellectual development with variable other features including brain abnormalities, microcephaly, hypotonia, movement disorder and/or spasticity, ventricular enlargement, hypoplasia, and behavioral problems (Snijders Blok et al., 2015; Nicola et al., 2019).


Clinical Features

Snijders Blok et al. (2015) reported 38 females with mildly to severely impaired intellectual development and variable neurologic features, including hypotonia in 12 (76%), movement disorders comprising dyskinesia, spasticity, and stiff-legged or wide-based gait in 17 (45%), microcephaly in 12 (32%), behavioral problems such as autism spectrum disorder, hyperactivity, and aggression in 20 (53%), and epilepsy in 6 (16%). Additional variable nonneurologic features included joint hyperlaxity, skin pigmentary abnormalities, cleft lip and/or palate, hearing and visual impairment, and precocious puberty. Some patients had abnormal brain imaging findings, such as corpus callosum hypoplasia (35%), ventricular enlargement (35%), and evidence of cortical dysplasia (4 patients). Although common dysmorphic facial features were noted, there was no consistent recognizable phenotype. Five males from 3 additional, unrelated families also had MRXSSB. Features included mild to severe intellectual disability, movement disorders, such as spasticity, behavior problems, and variable dysmorphic features. Carrier females in these 3 families were unaffected.

Kellaris et al. (2018) described 2 brothers with mildly to moderately impaired intellectual development, macrocephaly, and progressive spasticity. The eldest brother had dysarthria and progressive spastic paraparesis. He lost the ability to ambulate independently at age 21. The younger brother had a progressive spastic paraparesis and tremor with a learning disability/mixed expressive-receptive language disorder. Both showed similar brain MRI findings: prominent lateral ventricles and cortical sulci and symmetric, confluent periventricular T2-hyperintensity in the supratentorial white matter suggesting central white matter loss.

Nicola et al. (2019) studied 3 unrelated boys with impaired intellectual development requiring special education support. The first patient was a 9-year-old boy with mildly to moderately impaired intellectual development. A prenatal ultrasound revealed nuchal thickening. He had a history of atrial septal defect (ASD), patent ductus arteriosus (PDA), and feeding problems as an infant. The second patient was an 8-year-old boy with moderately impaired intellectual development and hyperactive, aggressive behavior. He was diagnosed with cyanotic heart disease (pulmonary atresia, ventral septal defect, and confluent branch pulmonary arteries) as a neonate and required a modified Blalock-Taussig shunt. The third patient was a 16-year-old boy with severely impaired intellectual development and pulmonary stenosis. All had involuntary movements, although this had resolved in patient 1. Two patients had hearing issues (recurrent otitis or conductive hearing loss) and ophthalmologic issues (cataracts, myopia). Nicola et al. (2019) recommended screening for cardiac anomalies as well as ophthalmologic and hearing surveillance in males identified with DDX3X variants.

Scala et al. (2019) described 3 unrelated females with severely impaired intellectual development, dysmorphic features, and central nervous system malformations. Patient 1 was an 11-year-old girl with a history of global developmental delay, absent speech, spastic tetraparesis, and severe scoliosis. She was incidentally diagnosed with a pilocytic astrocytoma at age 8. Patient 2 was a 2-year-old girl with a prenatal history of intrauterine growth retardation (IUGR), increased nuchal translucency, ventriculomegaly, and oligohydramnios. Postnatally, she had diffuse hypotonia, feeding problems, sensorineural hearing loss, microcephaly, and severe developmental delay. Patient 3 was a 10-year-old nonverbal girl with a history of IUGR, akinetic seizures, hand stereotypies, and microcephaly. Brain MRI studies revealed similar malformations in all 3 girls. The findings were characterized by bilateral frontal polymicrogyria (patients 1 and 3), variable degrees of corpus callosal hypodysgenesis, dysmorphic basal ganglia, small olfactory bulbs, and pontine and inferior vermis hypoplasia. White matter was globally reduced with consequent enlargement of the lateral ventricles.

Beal et al. (2019) analyzed 6 females from 5 unrelated families with impaired intellectual development. Common facial dysmorphisms in this cohort included short palpebral fissures, micrognathia, bulbous nasal tip, protruding ears, high-arched palate, thin upper vermilion, and smooth philtrum. Novel clinical features included dystonia in one patient and cyclical vomiting syndrome in another. Patient 6 was reported to have cutaneous mastocytosis; the authors noted that although this diagnosis may be unrelated to DDX3X, the Wnt-beta catenin (see 116806) pathway is known to be impaired in DDX3X and plays a role in the maintenance and differentiation of mast cells.

Chanes et al. (2019) described a 10-year-old girl born at 25 weeks' gestation following an emergency cesarian section for severe preeclampsia. She was referred for a genetics evaluation at age 19.5 months with a diagnosis of cerebral palsy. Physical examination was notable for microcephaly, dolichocephaly, epicanthal folds, telecanthus, large ears, and hypopigmented spots on the chest and abdomen. At age 6, she was diagnosed with global cognitive delays, attention deficit-hyperactivity disorder, and possible autism. Follow-up examination at age 10 revealed a normal head circumference, dolichostenomelic appearance, joint hypermobility, and a long face with broad nasal bridge, anteverted nares, and telecanthus. Pigmentary abnormalities were still present on her chest and abdomen. MRI revealed a thin corpus callosum, prominent prepontine cistern, vertical clivus, and prominent ventricles.


Inheritance

The transmission pattern of MRXSSB in 38 females from 35 families reported by Snijders Blok et al. (2015) was consistent with X-linked dominant inheritance. All reported DDX3X mutations in females have occurred de novo (Nicola et al., 2019).

The transmission pattern of MRXSSB in males in 3 families reported by Snijders Blok et al. (2015) was consistent with X-linked recessive inheritance. Carrier females in these families were unaffected. DDX3X mutations in some males have been reported to occur de novo (Nicola et al., 2019).


Molecular Genetics

Snijders Blok et al. (2015) identified 35 different de novo heterozygous mutations in the DDX3X gene (see, e.g., 300160.0001-300160.0004) in 38 girls with MRXSSB. The mutations were found by whole-exome sequencing of 3 large cohorts of patients referred for testing (including the Deciphering Developmental Disorders Study, 2015); DDX3X mutations were found in 1 to 3% of these patient cohorts, rendering it one of the most common causes of intellectual disability in females. Nineteen of the mutations were predicted to cause complete loss of function, resulting in haploinsufficiency in the female patients. In vitro cellular functional expression studies and in vivo studies in zebrafish of some of the identified missense mutations showed that they caused a loss of function in the canonical WNT signaling pathway with a disruption of beta-catenin signaling. There was no evidence for a dominant-negative effect; Snijders Blok et al. (2015) postulated haploinsufficiency as the disease mechanism. De novo variants were not found in any male patients who were part of the cohorts, but affected males in 3 families were found to carry hemizygous missense mutations in the DDX3X gene (see, e.g., 300160.0005) that were inherited from an unaffected mother. Functional studies revealed no differences of the male mutant alleles from wildtype, but Snijders Blok et al. (2015) speculated that they were pathogenic and that the effect of the mutant alleles was beyond the detection range of the assays. The results were consistent with the hypothesis that DDX3X is dosage sensitive and may have differential activity in females than in males.

By whole-exome sequencing, Kellaris et al. (2018) identified a maternally inherited missense mutation (R79K; 300160.0006) in the DDX3X gene in 2 brothers with MRXSSB. Functional testing of DDX3X activity in zebrafish embryos showed that the allele causes a partial loss of DDX3X function, indicating a hypomorphic variant.

In 3 unrelated males with MRXSSB, Nicola et al. (2019) identified hemizygous missense mutations in the DDX3X gene (see, e.g., R376H, 300160.0007 and V496M, 300160.0008). The mutations, which were found by exome sequencing and confirmed by Sanger sequencing, occurred de novo in 2 of the patients. Nicola et al. (2019) proposed that de novo DDX3X mutations are not necessarily male lethal and therefore should be considered as a cause of syndromic impaired intellectual development in both males and females.

Scala et al. (2019) identified 3 different de novo heterozygous mutations in the DDX3X in 3 unrelated females with MRXSSB (300160.0009-300160.0011). The mutations were found by whole-exome sequencing and confirmed by Sanger sequencing.

By whole-exome sequencing, Beal et al. (2019) identified 5 novel heterozygous DDX3X mutations (4 frameshifts and 1 splice site) in 6 females with MRXSSB from 5 unrelated families. Two sibs had the same frameshift mutation (300160.0012); parental testing for the mutation was negative, suggesting germline mosaicism. Although both girls had impaired intellectual development, the older sister was more severely affected.

By exome sequencing, Chanes et al. (2019) identified a de novo heterozygous frameshift mutation (300160.0013) in the DDX3X gene in a 10-year-old girl with MRXSSB.


REFERENCES

  1. Beal, B., Hayes, I., McGaughran, J., Amor, D. J., Miteff, C., Jackson, V., van Reyk, O., Subramanian, G., Hildebrand, M. S., Morgan, A. T., Goel, H. Expansion of phenotype of DDX3X syndrome: six new cases. Clin. Dysmorph. 28: 169-174, 2019. [PubMed: 31274575] [Full Text: https://doi.org/10.1097/MCD.0000000000000289]

  2. Chanes, N. M., Wong, J., Lacassie, Y. Further delineation of DDX3X syndrome. Clin. Dysmorph. 28: 149-151, 2019. [PubMed: 30817323] [Full Text: https://doi.org/10.1097/MCD.0000000000000263]

  3. Deciphering Developmental Disorders Study. Large-scale discovery of novel genetic causes of developmental disorders. Nature 519: 223-228, 2015. [PubMed: 25533962] [Full Text: https://doi.org/10.1038/nature14135]

  4. Kellaris, G., Khan, K., Baig, S. M., Tsai, I.-C., Zamora, F. M., Ruggieri, P., Natowicz, M. R., Katsanis, N. A hypomorphic inherited pathogenic variant in DDX3X causes male intellectual disability with additional neurodevelopmental and neurodegenerative features. Hum. Genomics 12: 11, 2018. Note: Electronic Article. [PubMed: 29490693] [Full Text: https://doi.org/10.1186/s40246-018-0141-y]

  5. Nicola, P., Blackburn, P. R., Rasmussen, K. J., Bertsch, N. L., Klee, E. W., Hasadsri, L., Pichurin, P. N., Rankin, J., Raymond, F. L., DDD Study, Clayton-Smith, J. De novo DDX3X missense variants in males appear viable and contribute to syndromic intellectual disability. Am. J. Med. Genet. 179A: 570-578, 2019. [PubMed: 30734472] [Full Text: https://doi.org/10.1002/ajmg.a.61061]

  6. Scala, M., Torella, A., Severino, M., Morana, G., Castello, R., Accogli, A., Verrico, A., Vari, M. S., Cappuccio, G., Pinelli, M., Vitiello, G., Terrone, G., D'Amico, A., TUDP Consortium, Nigro, V., Capra, V. Three de novo DDX3X variants associated with distinctive brain developmental abnormalities and brain tumor in intellectually disabled females. Europ. J. Hum. Genet. 27: 1254-1259, 2019. [PubMed: 30936465] [Full Text: https://doi.org/10.1038/s41431-019-0392-7]

  7. Snijders Blok, L., Madsen, E., Juusola, J., Gilissen, C., Baralle, D., Reijnders, M. R. F., Venselaar, H., Helsmoortel, C., Cho, M. T., Hoischen, A., Vissers, L. E. L. M., Koemans, T. S., and 74 others. Mutations in DDX3X are a common cause of unexplained intellectual disability with gender-specific effects on Wnt signaling. Am. J. Hum. Genet. 97: 343-352, 2015. [PubMed: 26235985] [Full Text: https://doi.org/10.1016/j.ajhg.2015.07.004]


Contributors:
Kelly A. Przylepa - updated : 05/07/2020

Creation Date:
Cassandra L. Kniffin : 8/31/2015

Edit History:
alopez : 12/15/2023
carol : 05/13/2021
carol : 05/07/2020
carol : 07/03/2017
carol : 09/04/2015
ckniffin : 9/1/2015