Entry - *300371 - ATP-BINDING CASSETTE, SUBFAMILY D, MEMBER 1; ABCD1 - OMIM
* 300371

ATP-BINDING CASSETTE, SUBFAMILY D, MEMBER 1; ABCD1


Alternative titles; symbols

ADRENOLEUKODYSTROPHY PROTEIN; ALDP


HGNC Approved Gene Symbol: ABCD1

Cytogenetic location: Xq28   Genomic coordinates (GRCh38) : X:153,724,856-153,744,755 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Xq28 Adrenoleukodystrophy 300100 XLR 3
Adrenomyeloneuropathy, adult 300100 XLR 3

TEXT

Description

ABCD1 (ALDP) maps to Xq28 and is mutated in the X-linked disorder adrenoleukodystrophy (ALD; 300100). ABCD1 is a member of the ATP-binding cassette (ABC) transporter superfamily. The superfamily contains membrane proteins that translocate a wide variety of substrates across extra- and intracellular membranes, including metabolic products, lipids and sterols, and drugs. Overexpression of certain ABC transporters occurs in cancer cell lines and tumors that are multidrug resistant such as ABCB1/MDR1 (171050), ABCC1/MRP1 (158343), and ABCG2 (603756). The family also includes ABCC7/CFTR (602421), the gene mutated in the autosomal recessive condition cystic fibrosis (Dean et al., 2001).


Cloning and Expression

Using positional cloning, Mosser et al. (1993) identified a gene partially deleted in 6 of 85 unrelated patients with adrenoleukodystrophy. In familial cases, the deletions segregated with the disease. In particular, an identical deletion was detected in 2 brothers with different clinical phenotypes of ALD. Candidate exons, identified by computer analysis of genomic sequences, were used to isolate cDNAs by exon-connection and screening of cDNA libraries. Northern blot data provided by Mosser et al. (1993) showed that some tissues with abundant peroxisomes (liver and kidney) have low levels of ALDP transcript, whereas other tissues with fewer peroxisomes (cardiac and skeletal muscle) have high levels. Valle and Gartner (1993) found it appealing, however, to think that ALDP is a peroxisomal membrane transporter directly involved in the import of the peroxisomal enzyme whose activity is defective, lignoceroyl-CoA synthetase (also known as very long chain fatty acid-CoA (VLCFA-CoA) synthetase (van den Bosch et al., 1992)). Aubourg et al. (1993) provided a review of the molecular information, including evidence that the 'ALD protein' is a peroxisomal transporter protein involved in the import or anchoring of VLCFA-CoA synthetase. The gene has an open reading frame of 2,235 bases which encodes a 745-amino acid protein with 38.5% amino acid identity and 78.9% similarity to the PMP70 protein (ABCD3; 170995). It was found to have no homology to the rat gene for long chain acyl-CoA synthetase.

Sarde et al. (1994) reported the sequence of the mouse ALD cDNA and data suggesting that homologous sequences are present in a wide range of species, including S. cerevisiae and C. elegans. Shani et al. (1995) cloned and characterized PXA1, a gene of Saccharomyces cerevisiae, which, because of similarities in sequence and function, they proposed to be an ortholog of the ALD gene.


Evolution

Eichler et al. (1997) identified a 9.7-kb segment encompassing exons 7 to 10 of the ALD gene that has duplicated to specific locations near the pericentromeric regions of chromosomes 2p11, 10p11, 16p11, and 22q11. Comparative sequence analysis reveals 92 to 96% nucleotide identity, indicating that the autosomal ALD paralogs arose relatively recently during the course of higher primate evolution, i.e., 5 to 10 million years ago. Analysis of sequences flanking the duplication region identified an unusual GCTTTTTGC repeat that may be a sequence-specific integration site for the process of pericentromeric-directed transposition. The breakpoint sequence and phylogenetic analysis predicted a 2-step transposition model, in which a duplication from Xq28 to pericentromeric 2p11 occurred once, followed by a rapid distribution of a larger duplicon cassette among the pericentromeric regions. Eichler et al. (1997) stated that knowledge of this duplicated segment should facilitate effective mutation detection among ALD patients and provide further insight into the molecular basis underlying a pericentromeric-directed mechanism for nonhomologous interchromosomal exchange.


Gene Structure

Sarde et al. (1994) reported that the ALD gene extends over 21 kb and contains 10 exons.

Kennedy et al. (1996) showed that the mouse Ald gene contains 10 exons and spans about 22 kb in band B of the X chromosome, 47 cM from the centromere.


Gene Function

ABCD1 expresses a half transporter which is located in the peroxisome. When mutated, ABCD1 results in the condition adrenoleukodystrophy with an elevation in very long chain fatty acids. ABCD1 is 1 of 4 related peroxisomal transporters that are found in the human genome, the others being ABCD2 (601081), ABCD3 (170995), and ABCD4 (603214). These genes are highly conserved in evolution, and 2 homologous genes are present in the yeast genome, PXA1 and PXA2. The PXA2 gene has been demonstrated to transport long chain fatty acids (Shani and Valle, 1996; Verleur et al., 1997). A defective pxa1 gene in Arabidopsis thaliana results in defective import of fatty acids into the peroxisome (Zolman et al., 2001).

Kobayashi et al. (1994) raised an antibody against the synthetic C-terminal peptides deduced from the cDNA of the ALD gene and used it to demonstrate an 80-kD band protein in control fibroblasts that was absent in a patient with ALD, in whom ALD mRNA was undetectable on Southern blot analysis. In an immunocytologic study, staining with the antibody was in a punctate pattern in normal fibroblasts, whereas no punctate staining was seen in cells from the ALD patient. These data were interpreted as indicating that the ALD gene encodes a membrane protein of 80 kD.

Ho et al. (1995) predicted that disruptive effects of the accumulation of very long chain saturated fatty acids on cell membrane structure and function may explain the neurologic manifestations of ALD patients. Especially the 26-carbon acid, hexacosanoic acid, is involved. They studied the interaction of radiolabelled hexacosanoic acid with model membranes and bovine serum albumin by NMR spectroscopy to compare properties of the hexacosanoic acid with those of typical dietary fatty acids. Desorption of hexacosanoic acid from membranes was orders of magnitude slower than that of shorter-chain fatty acids and binding to serum albumin was ineffective.

Using transient and stable overexpression of human cDNAs encoding the ALD protein and its closest relative, the ALDR (ABCD2; 601081) protein, Netik et al. (1999) could restore the impaired peroxisomal beta-oxidation in fibroblasts of ALD patients. The pathognomonic accumulation of very long chain fatty acids could also be prevented by overexpression of the ALDR protein in immortalized ALD cells. Immunofluorescence analysis demonstrated that the functional replacement of ALD protein by ALDR protein was not due to stabilization of the mutated ALD protein itself. Moreover, Netik et al. (1999) could restore the peroxisomal beta-oxidation defect in the liver of Ald-deficient mice by stimulation of Aldr and Pmp70 gene expression through a dietary treatment with the peroxisome proliferator fenofibrate. These results suggested that a correction of the biochemical defect in ALD might be possible by drug-induced overexpression or ectopic expression of the ALDR gene.

In cell cultures and mouse tissue, McGuinness et al. (2003) showed that the ALDP protein transporter may facilitate an interaction between peroxisomes and mitochondria, the 2 sites of VLCFA beta-oxidation.


Molecular Genetics

Using positional cloning, Mosser et al. (1993) identified a gene on Xq28 that was partially deleted in 6 of 85 unrelated patients with adrenoleukodystrophy. In familial cases, the deletions segregated with the disease.

Cartier et al. (1993) found abnormalities in the putative ALD gene in 6 patients, including one with a transcript which, although indistinguishable in size from controls, had a missense mutation predicting a glu291-to-lys substitution in a conserved region of the ALD protein; see 300371.0001.

Mosser et al. (1994) raised monoclonal antibodies against the ALD protein that detected a 75-kD band. This protein was absent in several patients with adrenoleukodystrophy. Immunofluorescence and immunoelectron microscopy showed that the ALDP is associated with the peroxisomal membrane. It may be involved in the import of very long chain fatty acid CoA synthase into the peroxisomal membrane.

To facilitate the detection of mutations in the ALD gene, Sarde et al. (1994) determined the intronic sequences flanking the exons as well as the sequence of the 3-prime untranslated region and of the immediate 5-prime promoter region. Sequences present in distal exons cross-hybridized strongly to additional sequences in the human genome. On a pulsed field map, they positioned the ALD gene between DXS15 and the L1CAM gene (308840), about 650 kb upstream from the color pigment genes. Because of the distance separating ALD from the color vision genes, Sarde et al. (1994) suggested that the frequent occurrence of color vision anomalies in patients with adrenomyeloneuropathy (the adult-onset form of ALD) may represent a secondary manifestation (i.e., the consequence of cerebral involvement) of ALD and not a contiguous gene syndrome.

To determine whether mutations occur in the ATP-binding domain, termed the nucleotide-binding fold (NBF), of the ALD protein, Fanen et al. (1994) used denaturing gradient gel electrophoresis (DGGE) to analyze exons 6 and 8, which encode this domain, in 50 ALD patients. They identified 4 amino acid substitutions, 3 frameshift mutations leading to a premature termination signal, and 1 splice mutation. These amino acid substitutions occurred at residues highly conserved in other ATP-binding cassette (ABC) proteins. In addition, they reported the first observation of a nonsense mutation in the ALD gene, occurring in exon 4.

Ligtenberg et al. (1995) performed a systematic analysis of the open reading frame of the ALD gene, using RT-PCR followed by direct sequencing, and demonstrated mutations in all 28 unrelated kindreds analyzed. No entire gene deletions or drastic promoter mutations were detected. In only 1 kindred did the mutation involve multiple exons. The other mutations were small alterations leading to missense (13 of 28) or nonsense mutations, a single amino acid deletion, frameshifts, or splice acceptor-site defects. The gene mutant in ALD encodes an ATP-binding transporter that is located in the peroxisomal membrane. Mutations affecting a single amino acid were concentrated in the region between the third and fourth putative transmembrane domains and in the ATP-binding domain. Braun et al. (1995) determined the mutations in the ALD gene in patients with different clinical phenotypes.

In 4 of 112 patients with ALD, Kok et al. (1995) detected large deletions of the carboxyl-terminal portion of the ALD gene. In 25 of the ALD probands whose ALD genes appeared normal by Southern blot analysis, they found variants on single strand conformation polymorphism (SSCP) analysis in 22; SSCP variants were found in none of 60 X chromosomes from normal individuals. Mutations were detected in all of the ALD probands. The mutations were distributed throughout the gene and did not correlate with phenotype. Approximately half were nonrecurrent missense mutations of which 64% occurred in CpG dinucleotides. There was a small cluster of frameshift mutations in a small region of exon 5, including an identical AG deletion in 7 unrelated probands. The data supported overwhelmingly the supposition that mutations in the putative ALD gene result in the disease.

In a screening of patients with adrenoleukodystrophy/adrenomyeloneuropathy from 20 kindreds, Krasemann et al. (1996) identified 19 mutations: 11 missense and 2 nonsense mutations, 5 deletions, and 1 insertion. Four mutations could be shown to be de novo. No correlation between the type of mutation and the severity of the phenotype could be determined with the exception of the R401Q mutation. Krasemann et al. (1996) stated that all mutations were detected only once. R617 seemed to be a hotspot of mutations, since they found 2 mutations (R617G and R617C) in addition to the mutations described previously by others.

Lachtermacher et al. (2000) noted that a very small percentage (0.1%) of affected males had plasma C26:0 levels that are borderline normal, and 15% of obligate female carriers have normal results. Effective mutation detection in these families is therefore fundamental to unambiguous determination of genetic status. Of particular concern are female members of kindreds segregating X-ALD mutations, because normal VLCFA levels do not guarantee lack of carrier status. Lachtermacher et al. (2000) described a fast method for detection of X-ALD mutations. The method was based on SSCP analysis of nested PCR fragments followed by sequence-determination reactions. Using this method, they found X-ALD mutations in 30 kindreds, including 15 not previously reported.

Dvorakova et al. (2001) examined the ABCD1 gene in probands from 11 unrelated Czech and Slovak families with X-linked ALD by the direct sequencing of cDNA or genomic PCR products. In 10 families there were 10 different mutations, 8 of which were novel. They also identified the first polymorphism causing an amino acid exchange in the ABCD1 gene, asn13 to thr.

Unterrainer et al. (2000) showed that restoration of beta-oxidation in X-ALD fibroblasts following transient transfection with normal ALD cDNA is more effective in ALDP-deficient fibroblasts compared with fibroblasts expressing normal amounts of mutated ALDP. Utilizing the HeLa Tet-on system, they constructed a stable HeLa cell line expressing a constant level of endogenous ALDP and doxycycline-inducible levels of mutated ALDP. Although mutated ALDP increased more than 6-fold in a dosage-dependent manner, the total amount of ALDP (mutated and normal) remained approximately even as demonstrated by Western blot and flow cytometric analyses. Increased amounts of mutated ALDP resulted in decreased peroxisomal beta-oxidation and accumulation of very long chain fatty acids. The authors hypothesized that mutated and normal ALDP may compete for integration into a limited number of sites in the peroxisomal membrane.

Kemp et al. (2001) reviewed ABCD1 mutations in X-linked adrenoleukodystrophy. The majority of the mutations are point mutations, but large deletions had been described. No correlation between genotype and phenotype was evident. In 15 to 20% of obligate heterozygotes, results of tests for elevated levels of VLCFA in plasma were false-negative. Therefore, mutation analysis is the only reliable method for identification of heterozygotes. Kemp et al. (2001) reviewed the 406 mutations contained in an online X-linked adrenoleukodystrophy mutation database and reported 47 novel mutations.

Corzo et al. (2002) described a contiguous gene microdeletion syndrome involving the ABCD1 and BCAP31 (300398) genes, which they called the contiguous ABCD1/DXS1375E deletion syndrome (CADDS; 300475).

In a 3-year-old Japanese boy with X-linked ALD, Matsumoto et al. (2005) identified a partial deletion (exons 3 to 10) of the ABCD1 gene with fusion to a neighboring gene, PLXNB3 (300214). Sequencing showed that the breakpoints were at nucleotide +1374 in intron 2 of the ABCD1 gene and at nucleotide +915 in intron 2 of the PLXNB3 gene. The mother was confirmed as a carrier of the deletion.

Childhood cerebral adrenoleukodystrophy (CCER), adrenomyeloneuropathy (AMN), and AMN with cerebral demyelination are the main phenotypic variants of X-linked adrenoleukodystrophy. Asheuer et al. (2005) studied the expression of the ABCD1, ABCD2, ABCD3, and ABCD4 genes and 2 VLCFA synthetase genes, VLCS (SLC27A2; 603247) and BG1 (ACSBG1; 614362), in fibroblasts and brains from normal controls and ALD patients with the 3 main phenotypes, and they studied VLCFA concentrations in normal-appearing white matter from ALD patients with the 3 main phenotypes. The authors showed that ABCD1-truncating mutations were unlikely to cause variation in the ALD phenotype. Accumulation of saturated VLCFA in normal-appearing white matter correlated with ALD phenotype. Expression of ABCD4 and BG1, but not of the ABCD2, ABCD3, and VLCS genes, tended to correlate with the severity of the disease, acting early in the pathogenesis of ALD.

Launay et al. (2024) observed mitochondrial network abnormalities in fibroblasts from patients with ALD after treatment with C26:0 very long chain fatty acid, which resolved with treatment with the antioxidant N-acetylcysteine. C26:0 treatment also resulted in increased phosphorylation of DRP1 (128240) and translocation to the mitochondrial network. Treatment with a DRP1 inhibitor resolved the mitochondrial network abnormalities.


Animal Model

Forss-Petter et al. (1997) generated mice deficient in ALDP by targeted disruption. Motor functions in Aldp-deficient mice developed on schedule, and unexpectedly, adult animals appeared unaffected by neurologic symptoms up to 6 months of age. Biochemical analyses demonstrated impaired beta-oxidation in mutant fibroblasts and abnormal accumulation of very long chain fatty acids in the CNS and kidney. In 6-month-old mutants, adrenal cortex cells displayed a ballooned morphology and needle-like lipid inclusions, also found in testis and ovaries. However, lipid inclusions and demyelinating lesions of the CNS were not a feature.

Heinzer et al. (2003) characterized a very long chain acyl-CoA synthetase (VLCS) knockout mouse that exhibited decreased peroxisomal VLCS activity and VLCFA beta-oxidation but did not accumulate VLCFAs. They generated mice doubly null for Vlcs and Abcd1; the double knockout mice had the biochemical abnormalities observed in the individual knockout mice but did not display a more severe X-linked ALD phenotype. Heinzer et al. (2003) concluded that VLCFA levels are independent of peroxisomal fatty acid beta-oxidation, that there is no ABCD1/VLCS interaction, and that the common severe forms of X-linked ALD cannot be modeled by decreasing peroxisomal VLCS activity in the X-linked ALD mouse.

In Abcd1-knockout mice, Pujol et al. (2004) demonstrated that axonal damage was the first pathologic event in this model, followed by myelin degeneration. The phenotype could be modulated through expression levels of Abcd2 (601081). Overexpression of Abcd2 in Abcd1-knockout mice prevented both VLCFA accumulation and neurodegenerative features, whereas Abcd1/Abcd2 double mutants exhibited an earlier onset and more severe disease.

Oezen et al. (2005) reported normal VLCFA levels in mitochondria of Abcd1-deficient mice. Polarographic analyses of the respiratory chain as well as enzymatic assays of isolated muscle mitochondria revealed no differences between Abcd1-deficient and control mice. Ultrastructural analysis revealed normal size, structure, and localization of mitochondria in muscle of both groups. Mitochondrial enzyme activities in brain homogenates of Abcd1-deficient and wildtype animals also did not differ, and studies on mitochondrial oxidative phosphorylation in permeabilized human skin fibroblasts of ALD patients and controls revealed no abnormalities. Oezen et al. (2005) concluded that accumulation of VLCFA per se does not cause mitochondrial abnormalities, and vice versa mitochondrial abnormalities are not responsible for the accumulation of VLCFA in Abcd1-deficient mice.

Fourcade et al. (2008) found evidence of lipoxidative protein damage in the spinal cord of Abcd1-null mice as early as 3.5 months of age before the onset of neurologic symptoms. At 12 months, Abcd1-null mice had accumulated additional proteins affected by oxidative damage. Abcd1-null mice, spinal cord slices from these mice, and human ALD fibroblasts all showed a defective antioxidant response to VLCFA.

Launay et al. (2024) identified abnormalities of axonal mitochondria in the corticospinal tracts of Abcd1- mice. In 14-month-old Abcd1- mouse spinal cords, Launay et al. (2024) identified donut-shaped mitochondria in presynaptic boutons, indicating mitochondrial stress. Furthermore, in 12-month-old Abcd1- mouse spinal cord neurons, Launay et al. (2024) identified increased expression of phosphorylated Drp1, indicating increased mitochondrial fission. Treatment of 8-month-old Abcd1- mice with antioxidants for 4 months resulted in normalized Drp1 expression. Launay et al. (2024) then studied mitochondria in C. elegans deficient in pmp-4, the ortholog of ABCD1. Mutant worms had abnormal appearing axonal mitochondria, which normalized with drp-1 silencing.


ALLELIC VARIANTS ( 26 Selected Examples):

.0001 ADRENOLEUKODYSTROPHY

ABCD1, GLU291LYS
  
RCV000012044

In fibroblasts from a patient with adrenoleukodystrophy (ALD; 300100), Cartier et al. (1993) found a 4.2-kb transcript, as in normal fibroblasts, by Northern blot analysis. However, a probe from the 5-prime end of the ALD gene detected an abnormal 1.9-kb TaqI restriction DNA fragment pointing to a novel TaqI restriction site in exon 1. Further study revealed a G-to-A transition at base 1258 in the ALD allele of the affected patient and in one allele of his mother, converting glutamic acid to lysine at residue 291.


.0002 ADRENOLEUKODYSTROPHY

ABCD1, PRO484ARG
  
RCV000012045

Berger et al. (1994) used PCR to amplify fragments of ALD cDNA from a patient with adolescent adrenoleukodystrophy (ALD; 300100). Bidirectional sequencing of the entire coding ALD gene disclosed a C-to-G transversion at nucleotide 1451 in exon 5, resulting in substitution of proline-484 by arginine. Altogether, 5 of 9 sibs had the mutation: the proband with adolescent ALD, 2 with cerebral ALD, 1 with adrenomyeloneuropathy, and 1 with Addison disease only. All 5, as well as the symptomatic mother, showed accumulation of very long chain fatty acids. The mutation was not found in unaffected members of the family in 5 unrelated ALD patients or in 20 controls. The mother had slowly progressive spastic paraparesis. Thus, 5 different phenotypes were observed in the 6 affected members of the family.


.0003 ADRENOLEUKODYSTROPHY

ABCD1, IVS6AS, A-G, -2
  
RCV000012046...

In a patient with adrenoleukodystrophy (ALD; 300100), Kemp et al. (1995) found an A-to-G transition at position -2 of the splice acceptor site at the 3-prime end of intron 6. In the patient's mother, both the normal and the mutant allele were present. Exon 7 of the ALD gene contains a sequence that can serve as a cryptic splice site. Splicing at this site creates an mRNA of which 34 bp are deleted, which leads to a frameshift at amino acid arg545, immediately followed by a stop codon.


.0004 ADRENOLEUKODYSTROPHY

ABCD1, IVS8AS, G-A, -10, 8-BP INS
  
RCV000077961...

In a patient with adrenoleukodystrophy (ALD; 300100), Kemp et al. (1995) found an insertion of 8 bp at the start of exon 9 of the ALD gene. Sequencing of the genomic fragment containing the 149-bp intron 8 revealed that the G at position -10 of the 3-prime splice acceptor site of exon 9 was substituted with an A. This mutation created an upstream novel splice acceptor site. The 8-bp insertion led to a frameshift at position arg622 and a premature stop codon 16 amino acids downstream.


.0005 ADRENOMYELONEUROPATHY

ABCD1, ARG389GLY
  
RCV000012048...

In a family in which 1 male had adrenomyeloneuropathy (AMN; see 300100), Krasemann et al. (1996) identified a de novo mutation in exon 3 of the ALD gene: a C-to-G transversion at nucleotide 1551 resulting in an arg389-to-gly substitution.


.0006 ADRENOLEUKODYSTROPHY

ABCD1, ASN148SER
  
RCV000012049...

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified an A-to-G transition at nucleotide 829 in exon 1 of the ALD gene, converting asparagine-148 to serine.


.0007 ADRENOLEUKODYSTROPHY

ABCD1, TYR174ASP
  
RCV000012050

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a T-to-G transversion at nucleotide 906 in exon 1 of the ALD gene, converting tyrosine-174 to aspartic acid. The mutation creates a new TaqI restriction site.


.0008 ADRENOLEUKODYSTROPHY

ABCD1, GLY266ARG
  
RCV000012051...

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a G-to-A transition at nucleotide 1182 in exon 1 of the ALD gene, converting glycine-266 to arginine.


.0009 ADRENOLEUKODYSTROPHY

ABCD1, ARG401GLN
  
RCV000012052...

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a G-to-A transition at nucleotide 1588 in exon 3 of the ALD gene, converting arginine-401 to glutamine.


.0010 ADRENOLEUKODYSTROPHY

ABCD1, ARG418TRP
  
RCV000012053...

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a C-to-T transition at nucleotide 1638 in exon 4 of the ALD gene, converting arginine-418 to tryptophan. The patient's mother carried the same nucleotide substitution in heterozygous form.


.0011 ADRENOMYELONEUROPATHY

ABCD1, ARG464TER
  
RCV000012054...

In 1 patient with Addison disease at age 10 years and adrenomyeloneuropathy (AMN; see 300100) at age 15 years, Fanen et al. (1994) identified a C-to-T transition at nucleotide 1776 in exon 4 of the ALD gene, converting arginine to a premature termination codon at residue 464. The mutation creates a new BglII restriction site.


.0012 ADRENOLEUKODYSTROPHY

ABCD1, 2-BP DEL, 1801AG
  
RCV000012055...

In 3 unrelated patients with the classic childhood form of adrenoleukodystrophy (ALD; 300100), Barcelo et al. (1994) and Fuchs et al. (1994) identified a 2-bp (AG) deletion at nucleotides 1801-1802 in exon 5, leading to a frameshift after the first 471 amino acids and a premature termination codon. The predicted mutated protein would have 553 amino acids (192 residues less than the normal protein), losing both ATP binding sites.


.0013 ADRENOLEUKODYSTROPHY

ABCD1, GLU477TER
  
RCV000012056

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a G-to-T transition at nucleotide 1815 in exon 5 of the ALD gene, converting glutamic acid to a premature termination codon at residue 477.


.0014 ADRENOLEUKODYSTROPHY

ABCD1, SER515PHE
  
RCV000012057

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a C-to-T transition at nucleotide 1930 in exon 6 of the ALD gene, converting serine-515 to phenylalanine.


.0015 ADRENOLEUKODYSTROPHY

ABCD1, 1-BP DEL, 1937C
  
RCV000012058

Fanen et al. (1994) identified a 1-bp deletion at nucleotide 1937 of the ALD gene, leading to a termination codon at position 557 in exon 6 and a truncated protein. The mutation was detected in the heterozygous mother of a boy who died at age 13 years from cerebral adrenoleukodystrophy (ALD; 300100).


.0016 ADRENOMYELONEUROPATHY

ABCD1, ARG518TRP
  
RCV000012059...

In an adult patient who developed adrenomyeloneuropathy (AMN; see 300100) at age 27 years, Fanen et al. (1994) identified a C-to-T transition at nucleotide 1938 in exon 6 of the ALD gene, converting arginine-518 to tryptophan.


.0017 ADRENOMYELONEUROPATHY

ABCD1, IVS6DS, G-A, +1
  
RCV000012060

Fanen et al. (1994) identified a G-to-A substitution at position 2020, which is the first nucleotide of the donor splice site of intron 6 of the ALD gene. The mutation was detected in an adult who developed adrenomyeloneuropathy (AMN; see 300100) at age 28 years and died at age 43 years from cerebral involvement. This family illustrates the marked clinical variation of adrenoleukodystrophy: 2 infantile cerebral cases, 1 pure adrenomyeloneuropathy case, and 1 Addison disease case were diagnosed among the brothers or nephews of this patient.


.0018 ADRENOLEUKODYSTROPHY

ABCD1, 2-BP DEL, 2177TA
  
RCV000012061

In a family in which 2 brothers had cerebral adrenoleukodystrophy (ALD; 300100), one at age 7 years and the other at age 9 years, Fanen et al. (1994) identified a 2-bp (TA) deletion at nucleotide 2177 of the ALD gene, leading to a termination codon at position 599 in exon 8 and a truncated protein.


.0019 ADDISON DISEASE

ABCD1, SER606LEU
  
RCV000012062...

In a patient who had Addison disease without neurologic involvement at 20 years of age, Fanen et al. (1994) identified a C-to-T transition at nucleotide 2203 in exon 8 of the ALD gene, converting serine-606 to leucine.


.0020 ADDISON DISEASE

ABCD1, 1-BP DEL, 2204G
  
RCV000012063

In a family in which the affected propositus had isolated Addison disease at age 21 years, Fanen et al. (1994) identified a 1-bp (G) deletion at nucleotide 2204 of the ALD gene, leading to a termination codon at position 635 in exon 8 and a truncated protein.


.0021 ADRENOMYELONEUROPATHY

ABCD1, ARG617HIS
  
RCV000012064...

In a patient who developed adrenomyeloneuropathy (AMN; see 300100) with cerebral involvement at age 33 years, Fanen et al. (1994) identified a G-to-A transition at nucleotide 2236 in exon 8 of the ALD gene, converting arginine-617 to histidine. The mutation leads to a conservative change at the first amino acid of the Walker B motif. The mutation was absent in DNA from the patient's mother, who had normal plasma VLCFA levels (predicting a noncarrier status). Therefore, the arg617-to-his mutation presented by this patient is likely to be a de novo mutation.


.0022 ADRENOLEUKODYSTROPHY

ABCD1, ARG617CYS
  
RCV000012065...

Fanen et al. (1994) identified a C-to-T transition at nucleotide 2235 in exon 8 of the ALD gene, converting arginine-617 to cysteine. The mutation was discovered in a family in which the index case died of cerebral adrenoleukodystrophy (ALD; 300100) at age 9 years. DNA from this patient was not available for study, but the mutation was shown to be present in his heterozygous mother and sister and absent in his normal brother, sister, and aunt.


.0023 ADRENOLEUKODYSTROPHY

ABCD1, 3-BP DEL, 1258GAG, GLU291DEL
  
RCV000012066...

The glu291-to-lys mutation of the ALD gene (300371.0001) is a recognized cause of adrenoleukodystrophy (ALD; 300100). Kano et al. (1998) described deletion of codon 291 (GAG) in a Japanese family with a variety of phenotypes in affected individuals. Whereas the proband was classified as having a rare intermediate type of adult cerebral and cerebello-brainstem form of ALD, his younger brother and nephew had the childhood type of ALD. Another nephew was classified as having an adolescent form. At 47 years of age, the proband developed depression, personality change, forgetfulness, and carelessness. He was noted to be severely amotivational, apathetic, and irritable. These behavioral abnormalities resulted in occupational and social compromise and hospitalization at age 48. No skin pigmentation was noted. The level of tau (157140) in the proband's cerebrospinal fluid was as high as that of patients with Alzheimer disease (104300). His brain MRI showed bilateral abnormalities in the cerebellar hemispheres and brainstem, but not in the cerebral white matter, where marked reductions of cerebral blood flow and oxygen metabolism were clearly demonstrated by positron emission tomography. The proband's younger brother developed mental deterioration, inactiveness, impaired vision, slurring of speech, and gait disturbance at age 8. He died 1 year later of respiratory failure. Autopsy was performed in his case and in that of one of the nephews, who had onset of symptoms at age 7 and died at age 9. Autopsy in both showed massive demyelination of the cerebral white matter but sparing of the U-fibers, compatible with childhood ALD.


.0024 ADRENOLEUKODYSTROPHY

ABCD1, IVS8DS, G-A, +1
  
RCV000012067

Guimaraes et al. (2001) found a splice site mutation in the ABCD1 gene which was associated with production of a small quantity of correctly spliced mRNA molecules and a small amount of ALD protein detected by Western blot analysis. The atypical and relatively mild early course of the patient was attributed to the existence of some normal ALDP. The patient was a 23-year-old man who had developed normally until the age of 9 years, when he was diagnosed with Addison disease. At that time, no neurologic involvement could be observed. Five years later, he was biochemically diagnosed with adrenoleukodystrophy (ALD; 300100); VLCFA levels were found to be increased in both plasma and skin fibroblasts. At the age of 21 years, muscular weakness and difficulty in walking led him to a new clinical evaluation; spastic paraparesis with neurophysiologic abnormalities with an altered spinal cord MRI and a normal cerebral MRI were found. Eighteen months later, the patient displayed a cerebral AMN subphenotype associated with an affected cerebellum. He was in a vegetative state at the time of report.


.0025 ADRENOLEUKODYSTROPHY

ABCD1, IVS1DS, G-A, -1
  
RCV000012068

Guimaraes et al. (2001) described a 'leaky' splicing mutation in a patient with atypical adrenoleukodystrophy (ALD; 300100). The alteration was at the -1 position of the donor splice site of exon 1. The mutation resulted in the utilization of a cryptic 5-prime splice site within intron 1. Nevertheless, this change allowed for some correct splicing. Western blot analysis showed the existence of normal-migrating ALD protein. However, as expected, the levels of this protein were greatly decreased. The patient was a 44-year-old man who showed an AMN pure subphenotype of X-ALD. He was diagnosed with Addison disease at the age of 22 years. Ten years later spastic paraparesis was manifested and the biochemical diagnosis (increased VLCFA levels in plasma and fibroblasts) established him as an X-ALD patient.


.0026 ADRENOMYELONEUROPATHY

ABCD1, 26-BP DEL, NT369
  
RCV000012069

In a large kindred in which 22 members over 6 generations had adrenomyeloneuropathy (AMN; see 300100), O'Neill et al. (2001) identified a 26-bp deletion (nucleotides 369-394) in the N terminus of the ABCD1 gene, resulting in deletion of amino acids 1-65, including the translation initiation codon. In cells of affected members, the protein was found at reduced levels and appeared to localize normally within the cell, but beta-oxidative function was severely reduced to approximately 20% of normal. The kindred had a highly concordant phenotype with onset in the thirties or forties of a progressive gait disturbance, lower extremity spasticity, hyperreflexia, and occasional sensory abnormalities. The mutation segregated with the disease in 5 affected men and 7 affected women who were tested and was absent in 30 unaffected family members and 40 normal controls, suggesting X-linked dominant inheritance with 100% disease penetrance in female carriers.


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Hilary J. Vernon - updated : 08/30/2024
Cassandra L. Kniffin - updated : 12/8/2009
George E. Tiller - updated : 6/5/2008
George E. Tiller - updated : 5/19/2008
George E. Tiller - updated : 5/21/2007
Marla J. F. O'Neill - updated : 10/25/2005
George E. Tiller - updated : 2/25/2005
Cassandra L. Kniffin - updated : 4/2/2003
Cassandra L. Kniffin - updated : 1/21/2003
Creation Date:
Gerald V. Raymond : 1/13/2003
carol : 08/30/2024
carol : 09/25/2022
carol : 02/22/2017
alopez : 02/21/2017
mgross : 11/28/2011
wwang : 1/4/2010
ckniffin : 12/8/2009
wwang : 6/5/2008
wwang : 5/20/2008
terry : 5/19/2008
wwang : 6/1/2007
terry : 5/21/2007
wwang : 10/27/2005
terry : 10/25/2005
tkritzer : 3/4/2005
terry : 3/3/2005
terry : 2/25/2005
carol : 2/3/2004
carol : 4/18/2003
tkritzer : 4/8/2003
ckniffin : 4/2/2003
carol : 1/30/2003
tkritzer : 1/28/2003
ckniffin : 1/21/2003
carol : 1/13/2003
carol : 1/13/2003
carol : 1/13/2003

* 300371

ATP-BINDING CASSETTE, SUBFAMILY D, MEMBER 1; ABCD1


Alternative titles; symbols

ADRENOLEUKODYSTROPHY PROTEIN; ALDP


HGNC Approved Gene Symbol: ABCD1

SNOMEDCT: 1269423000, 363732003, 65389002;   ICD10CM: E27.1, E71.52, E71.522, E71.529;  


Cytogenetic location: Xq28   Genomic coordinates (GRCh38) : X:153,724,856-153,744,755 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Xq28 Adrenoleukodystrophy 300100 X-linked recessive 3
Adrenomyeloneuropathy, adult 300100 X-linked recessive 3

TEXT

Description

ABCD1 (ALDP) maps to Xq28 and is mutated in the X-linked disorder adrenoleukodystrophy (ALD; 300100). ABCD1 is a member of the ATP-binding cassette (ABC) transporter superfamily. The superfamily contains membrane proteins that translocate a wide variety of substrates across extra- and intracellular membranes, including metabolic products, lipids and sterols, and drugs. Overexpression of certain ABC transporters occurs in cancer cell lines and tumors that are multidrug resistant such as ABCB1/MDR1 (171050), ABCC1/MRP1 (158343), and ABCG2 (603756). The family also includes ABCC7/CFTR (602421), the gene mutated in the autosomal recessive condition cystic fibrosis (Dean et al., 2001).


Cloning and Expression

Using positional cloning, Mosser et al. (1993) identified a gene partially deleted in 6 of 85 unrelated patients with adrenoleukodystrophy. In familial cases, the deletions segregated with the disease. In particular, an identical deletion was detected in 2 brothers with different clinical phenotypes of ALD. Candidate exons, identified by computer analysis of genomic sequences, were used to isolate cDNAs by exon-connection and screening of cDNA libraries. Northern blot data provided by Mosser et al. (1993) showed that some tissues with abundant peroxisomes (liver and kidney) have low levels of ALDP transcript, whereas other tissues with fewer peroxisomes (cardiac and skeletal muscle) have high levels. Valle and Gartner (1993) found it appealing, however, to think that ALDP is a peroxisomal membrane transporter directly involved in the import of the peroxisomal enzyme whose activity is defective, lignoceroyl-CoA synthetase (also known as very long chain fatty acid-CoA (VLCFA-CoA) synthetase (van den Bosch et al., 1992)). Aubourg et al. (1993) provided a review of the molecular information, including evidence that the 'ALD protein' is a peroxisomal transporter protein involved in the import or anchoring of VLCFA-CoA synthetase. The gene has an open reading frame of 2,235 bases which encodes a 745-amino acid protein with 38.5% amino acid identity and 78.9% similarity to the PMP70 protein (ABCD3; 170995). It was found to have no homology to the rat gene for long chain acyl-CoA synthetase.

Sarde et al. (1994) reported the sequence of the mouse ALD cDNA and data suggesting that homologous sequences are present in a wide range of species, including S. cerevisiae and C. elegans. Shani et al. (1995) cloned and characterized PXA1, a gene of Saccharomyces cerevisiae, which, because of similarities in sequence and function, they proposed to be an ortholog of the ALD gene.


Evolution

Eichler et al. (1997) identified a 9.7-kb segment encompassing exons 7 to 10 of the ALD gene that has duplicated to specific locations near the pericentromeric regions of chromosomes 2p11, 10p11, 16p11, and 22q11. Comparative sequence analysis reveals 92 to 96% nucleotide identity, indicating that the autosomal ALD paralogs arose relatively recently during the course of higher primate evolution, i.e., 5 to 10 million years ago. Analysis of sequences flanking the duplication region identified an unusual GCTTTTTGC repeat that may be a sequence-specific integration site for the process of pericentromeric-directed transposition. The breakpoint sequence and phylogenetic analysis predicted a 2-step transposition model, in which a duplication from Xq28 to pericentromeric 2p11 occurred once, followed by a rapid distribution of a larger duplicon cassette among the pericentromeric regions. Eichler et al. (1997) stated that knowledge of this duplicated segment should facilitate effective mutation detection among ALD patients and provide further insight into the molecular basis underlying a pericentromeric-directed mechanism for nonhomologous interchromosomal exchange.


Gene Structure

Sarde et al. (1994) reported that the ALD gene extends over 21 kb and contains 10 exons.

Kennedy et al. (1996) showed that the mouse Ald gene contains 10 exons and spans about 22 kb in band B of the X chromosome, 47 cM from the centromere.


Gene Function

ABCD1 expresses a half transporter which is located in the peroxisome. When mutated, ABCD1 results in the condition adrenoleukodystrophy with an elevation in very long chain fatty acids. ABCD1 is 1 of 4 related peroxisomal transporters that are found in the human genome, the others being ABCD2 (601081), ABCD3 (170995), and ABCD4 (603214). These genes are highly conserved in evolution, and 2 homologous genes are present in the yeast genome, PXA1 and PXA2. The PXA2 gene has been demonstrated to transport long chain fatty acids (Shani and Valle, 1996; Verleur et al., 1997). A defective pxa1 gene in Arabidopsis thaliana results in defective import of fatty acids into the peroxisome (Zolman et al., 2001).

Kobayashi et al. (1994) raised an antibody against the synthetic C-terminal peptides deduced from the cDNA of the ALD gene and used it to demonstrate an 80-kD band protein in control fibroblasts that was absent in a patient with ALD, in whom ALD mRNA was undetectable on Southern blot analysis. In an immunocytologic study, staining with the antibody was in a punctate pattern in normal fibroblasts, whereas no punctate staining was seen in cells from the ALD patient. These data were interpreted as indicating that the ALD gene encodes a membrane protein of 80 kD.

Ho et al. (1995) predicted that disruptive effects of the accumulation of very long chain saturated fatty acids on cell membrane structure and function may explain the neurologic manifestations of ALD patients. Especially the 26-carbon acid, hexacosanoic acid, is involved. They studied the interaction of radiolabelled hexacosanoic acid with model membranes and bovine serum albumin by NMR spectroscopy to compare properties of the hexacosanoic acid with those of typical dietary fatty acids. Desorption of hexacosanoic acid from membranes was orders of magnitude slower than that of shorter-chain fatty acids and binding to serum albumin was ineffective.

Using transient and stable overexpression of human cDNAs encoding the ALD protein and its closest relative, the ALDR (ABCD2; 601081) protein, Netik et al. (1999) could restore the impaired peroxisomal beta-oxidation in fibroblasts of ALD patients. The pathognomonic accumulation of very long chain fatty acids could also be prevented by overexpression of the ALDR protein in immortalized ALD cells. Immunofluorescence analysis demonstrated that the functional replacement of ALD protein by ALDR protein was not due to stabilization of the mutated ALD protein itself. Moreover, Netik et al. (1999) could restore the peroxisomal beta-oxidation defect in the liver of Ald-deficient mice by stimulation of Aldr and Pmp70 gene expression through a dietary treatment with the peroxisome proliferator fenofibrate. These results suggested that a correction of the biochemical defect in ALD might be possible by drug-induced overexpression or ectopic expression of the ALDR gene.

In cell cultures and mouse tissue, McGuinness et al. (2003) showed that the ALDP protein transporter may facilitate an interaction between peroxisomes and mitochondria, the 2 sites of VLCFA beta-oxidation.


Molecular Genetics

Using positional cloning, Mosser et al. (1993) identified a gene on Xq28 that was partially deleted in 6 of 85 unrelated patients with adrenoleukodystrophy. In familial cases, the deletions segregated with the disease.

Cartier et al. (1993) found abnormalities in the putative ALD gene in 6 patients, including one with a transcript which, although indistinguishable in size from controls, had a missense mutation predicting a glu291-to-lys substitution in a conserved region of the ALD protein; see 300371.0001.

Mosser et al. (1994) raised monoclonal antibodies against the ALD protein that detected a 75-kD band. This protein was absent in several patients with adrenoleukodystrophy. Immunofluorescence and immunoelectron microscopy showed that the ALDP is associated with the peroxisomal membrane. It may be involved in the import of very long chain fatty acid CoA synthase into the peroxisomal membrane.

To facilitate the detection of mutations in the ALD gene, Sarde et al. (1994) determined the intronic sequences flanking the exons as well as the sequence of the 3-prime untranslated region and of the immediate 5-prime promoter region. Sequences present in distal exons cross-hybridized strongly to additional sequences in the human genome. On a pulsed field map, they positioned the ALD gene between DXS15 and the L1CAM gene (308840), about 650 kb upstream from the color pigment genes. Because of the distance separating ALD from the color vision genes, Sarde et al. (1994) suggested that the frequent occurrence of color vision anomalies in patients with adrenomyeloneuropathy (the adult-onset form of ALD) may represent a secondary manifestation (i.e., the consequence of cerebral involvement) of ALD and not a contiguous gene syndrome.

To determine whether mutations occur in the ATP-binding domain, termed the nucleotide-binding fold (NBF), of the ALD protein, Fanen et al. (1994) used denaturing gradient gel electrophoresis (DGGE) to analyze exons 6 and 8, which encode this domain, in 50 ALD patients. They identified 4 amino acid substitutions, 3 frameshift mutations leading to a premature termination signal, and 1 splice mutation. These amino acid substitutions occurred at residues highly conserved in other ATP-binding cassette (ABC) proteins. In addition, they reported the first observation of a nonsense mutation in the ALD gene, occurring in exon 4.

Ligtenberg et al. (1995) performed a systematic analysis of the open reading frame of the ALD gene, using RT-PCR followed by direct sequencing, and demonstrated mutations in all 28 unrelated kindreds analyzed. No entire gene deletions or drastic promoter mutations were detected. In only 1 kindred did the mutation involve multiple exons. The other mutations were small alterations leading to missense (13 of 28) or nonsense mutations, a single amino acid deletion, frameshifts, or splice acceptor-site defects. The gene mutant in ALD encodes an ATP-binding transporter that is located in the peroxisomal membrane. Mutations affecting a single amino acid were concentrated in the region between the third and fourth putative transmembrane domains and in the ATP-binding domain. Braun et al. (1995) determined the mutations in the ALD gene in patients with different clinical phenotypes.

In 4 of 112 patients with ALD, Kok et al. (1995) detected large deletions of the carboxyl-terminal portion of the ALD gene. In 25 of the ALD probands whose ALD genes appeared normal by Southern blot analysis, they found variants on single strand conformation polymorphism (SSCP) analysis in 22; SSCP variants were found in none of 60 X chromosomes from normal individuals. Mutations were detected in all of the ALD probands. The mutations were distributed throughout the gene and did not correlate with phenotype. Approximately half were nonrecurrent missense mutations of which 64% occurred in CpG dinucleotides. There was a small cluster of frameshift mutations in a small region of exon 5, including an identical AG deletion in 7 unrelated probands. The data supported overwhelmingly the supposition that mutations in the putative ALD gene result in the disease.

In a screening of patients with adrenoleukodystrophy/adrenomyeloneuropathy from 20 kindreds, Krasemann et al. (1996) identified 19 mutations: 11 missense and 2 nonsense mutations, 5 deletions, and 1 insertion. Four mutations could be shown to be de novo. No correlation between the type of mutation and the severity of the phenotype could be determined with the exception of the R401Q mutation. Krasemann et al. (1996) stated that all mutations were detected only once. R617 seemed to be a hotspot of mutations, since they found 2 mutations (R617G and R617C) in addition to the mutations described previously by others.

Lachtermacher et al. (2000) noted that a very small percentage (0.1%) of affected males had plasma C26:0 levels that are borderline normal, and 15% of obligate female carriers have normal results. Effective mutation detection in these families is therefore fundamental to unambiguous determination of genetic status. Of particular concern are female members of kindreds segregating X-ALD mutations, because normal VLCFA levels do not guarantee lack of carrier status. Lachtermacher et al. (2000) described a fast method for detection of X-ALD mutations. The method was based on SSCP analysis of nested PCR fragments followed by sequence-determination reactions. Using this method, they found X-ALD mutations in 30 kindreds, including 15 not previously reported.

Dvorakova et al. (2001) examined the ABCD1 gene in probands from 11 unrelated Czech and Slovak families with X-linked ALD by the direct sequencing of cDNA or genomic PCR products. In 10 families there were 10 different mutations, 8 of which were novel. They also identified the first polymorphism causing an amino acid exchange in the ABCD1 gene, asn13 to thr.

Unterrainer et al. (2000) showed that restoration of beta-oxidation in X-ALD fibroblasts following transient transfection with normal ALD cDNA is more effective in ALDP-deficient fibroblasts compared with fibroblasts expressing normal amounts of mutated ALDP. Utilizing the HeLa Tet-on system, they constructed a stable HeLa cell line expressing a constant level of endogenous ALDP and doxycycline-inducible levels of mutated ALDP. Although mutated ALDP increased more than 6-fold in a dosage-dependent manner, the total amount of ALDP (mutated and normal) remained approximately even as demonstrated by Western blot and flow cytometric analyses. Increased amounts of mutated ALDP resulted in decreased peroxisomal beta-oxidation and accumulation of very long chain fatty acids. The authors hypothesized that mutated and normal ALDP may compete for integration into a limited number of sites in the peroxisomal membrane.

Kemp et al. (2001) reviewed ABCD1 mutations in X-linked adrenoleukodystrophy. The majority of the mutations are point mutations, but large deletions had been described. No correlation between genotype and phenotype was evident. In 15 to 20% of obligate heterozygotes, results of tests for elevated levels of VLCFA in plasma were false-negative. Therefore, mutation analysis is the only reliable method for identification of heterozygotes. Kemp et al. (2001) reviewed the 406 mutations contained in an online X-linked adrenoleukodystrophy mutation database and reported 47 novel mutations.

Corzo et al. (2002) described a contiguous gene microdeletion syndrome involving the ABCD1 and BCAP31 (300398) genes, which they called the contiguous ABCD1/DXS1375E deletion syndrome (CADDS; 300475).

In a 3-year-old Japanese boy with X-linked ALD, Matsumoto et al. (2005) identified a partial deletion (exons 3 to 10) of the ABCD1 gene with fusion to a neighboring gene, PLXNB3 (300214). Sequencing showed that the breakpoints were at nucleotide +1374 in intron 2 of the ABCD1 gene and at nucleotide +915 in intron 2 of the PLXNB3 gene. The mother was confirmed as a carrier of the deletion.

Childhood cerebral adrenoleukodystrophy (CCER), adrenomyeloneuropathy (AMN), and AMN with cerebral demyelination are the main phenotypic variants of X-linked adrenoleukodystrophy. Asheuer et al. (2005) studied the expression of the ABCD1, ABCD2, ABCD3, and ABCD4 genes and 2 VLCFA synthetase genes, VLCS (SLC27A2; 603247) and BG1 (ACSBG1; 614362), in fibroblasts and brains from normal controls and ALD patients with the 3 main phenotypes, and they studied VLCFA concentrations in normal-appearing white matter from ALD patients with the 3 main phenotypes. The authors showed that ABCD1-truncating mutations were unlikely to cause variation in the ALD phenotype. Accumulation of saturated VLCFA in normal-appearing white matter correlated with ALD phenotype. Expression of ABCD4 and BG1, but not of the ABCD2, ABCD3, and VLCS genes, tended to correlate with the severity of the disease, acting early in the pathogenesis of ALD.

Launay et al. (2024) observed mitochondrial network abnormalities in fibroblasts from patients with ALD after treatment with C26:0 very long chain fatty acid, which resolved with treatment with the antioxidant N-acetylcysteine. C26:0 treatment also resulted in increased phosphorylation of DRP1 (128240) and translocation to the mitochondrial network. Treatment with a DRP1 inhibitor resolved the mitochondrial network abnormalities.


Animal Model

Forss-Petter et al. (1997) generated mice deficient in ALDP by targeted disruption. Motor functions in Aldp-deficient mice developed on schedule, and unexpectedly, adult animals appeared unaffected by neurologic symptoms up to 6 months of age. Biochemical analyses demonstrated impaired beta-oxidation in mutant fibroblasts and abnormal accumulation of very long chain fatty acids in the CNS and kidney. In 6-month-old mutants, adrenal cortex cells displayed a ballooned morphology and needle-like lipid inclusions, also found in testis and ovaries. However, lipid inclusions and demyelinating lesions of the CNS were not a feature.

Heinzer et al. (2003) characterized a very long chain acyl-CoA synthetase (VLCS) knockout mouse that exhibited decreased peroxisomal VLCS activity and VLCFA beta-oxidation but did not accumulate VLCFAs. They generated mice doubly null for Vlcs and Abcd1; the double knockout mice had the biochemical abnormalities observed in the individual knockout mice but did not display a more severe X-linked ALD phenotype. Heinzer et al. (2003) concluded that VLCFA levels are independent of peroxisomal fatty acid beta-oxidation, that there is no ABCD1/VLCS interaction, and that the common severe forms of X-linked ALD cannot be modeled by decreasing peroxisomal VLCS activity in the X-linked ALD mouse.

In Abcd1-knockout mice, Pujol et al. (2004) demonstrated that axonal damage was the first pathologic event in this model, followed by myelin degeneration. The phenotype could be modulated through expression levels of Abcd2 (601081). Overexpression of Abcd2 in Abcd1-knockout mice prevented both VLCFA accumulation and neurodegenerative features, whereas Abcd1/Abcd2 double mutants exhibited an earlier onset and more severe disease.

Oezen et al. (2005) reported normal VLCFA levels in mitochondria of Abcd1-deficient mice. Polarographic analyses of the respiratory chain as well as enzymatic assays of isolated muscle mitochondria revealed no differences between Abcd1-deficient and control mice. Ultrastructural analysis revealed normal size, structure, and localization of mitochondria in muscle of both groups. Mitochondrial enzyme activities in brain homogenates of Abcd1-deficient and wildtype animals also did not differ, and studies on mitochondrial oxidative phosphorylation in permeabilized human skin fibroblasts of ALD patients and controls revealed no abnormalities. Oezen et al. (2005) concluded that accumulation of VLCFA per se does not cause mitochondrial abnormalities, and vice versa mitochondrial abnormalities are not responsible for the accumulation of VLCFA in Abcd1-deficient mice.

Fourcade et al. (2008) found evidence of lipoxidative protein damage in the spinal cord of Abcd1-null mice as early as 3.5 months of age before the onset of neurologic symptoms. At 12 months, Abcd1-null mice had accumulated additional proteins affected by oxidative damage. Abcd1-null mice, spinal cord slices from these mice, and human ALD fibroblasts all showed a defective antioxidant response to VLCFA.

Launay et al. (2024) identified abnormalities of axonal mitochondria in the corticospinal tracts of Abcd1- mice. In 14-month-old Abcd1- mouse spinal cords, Launay et al. (2024) identified donut-shaped mitochondria in presynaptic boutons, indicating mitochondrial stress. Furthermore, in 12-month-old Abcd1- mouse spinal cord neurons, Launay et al. (2024) identified increased expression of phosphorylated Drp1, indicating increased mitochondrial fission. Treatment of 8-month-old Abcd1- mice with antioxidants for 4 months resulted in normalized Drp1 expression. Launay et al. (2024) then studied mitochondria in C. elegans deficient in pmp-4, the ortholog of ABCD1. Mutant worms had abnormal appearing axonal mitochondria, which normalized with drp-1 silencing.


ALLELIC VARIANTS 26 Selected Examples):

.0001   ADRENOLEUKODYSTROPHY

ABCD1, GLU291LYS
SNP: rs128624213, ClinVar: RCV000012044

In fibroblasts from a patient with adrenoleukodystrophy (ALD; 300100), Cartier et al. (1993) found a 4.2-kb transcript, as in normal fibroblasts, by Northern blot analysis. However, a probe from the 5-prime end of the ALD gene detected an abnormal 1.9-kb TaqI restriction DNA fragment pointing to a novel TaqI restriction site in exon 1. Further study revealed a G-to-A transition at base 1258 in the ALD allele of the affected patient and in one allele of his mother, converting glutamic acid to lysine at residue 291.


.0002   ADRENOLEUKODYSTROPHY

ABCD1, PRO484ARG
SNP: rs128624214, ClinVar: RCV000012045

Berger et al. (1994) used PCR to amplify fragments of ALD cDNA from a patient with adolescent adrenoleukodystrophy (ALD; 300100). Bidirectional sequencing of the entire coding ALD gene disclosed a C-to-G transversion at nucleotide 1451 in exon 5, resulting in substitution of proline-484 by arginine. Altogether, 5 of 9 sibs had the mutation: the proband with adolescent ALD, 2 with cerebral ALD, 1 with adrenomyeloneuropathy, and 1 with Addison disease only. All 5, as well as the symptomatic mother, showed accumulation of very long chain fatty acids. The mutation was not found in unaffected members of the family in 5 unrelated ALD patients or in 20 controls. The mother had slowly progressive spastic paraparesis. Thus, 5 different phenotypes were observed in the 6 affected members of the family.


.0003   ADRENOLEUKODYSTROPHY

ABCD1, IVS6AS, A-G, -2
SNP: rs1569541109, ClinVar: RCV000012046, RCV002399317, RCV003886360

In a patient with adrenoleukodystrophy (ALD; 300100), Kemp et al. (1995) found an A-to-G transition at position -2 of the splice acceptor site at the 3-prime end of intron 6. In the patient's mother, both the normal and the mutant allele were present. Exon 7 of the ALD gene contains a sequence that can serve as a cryptic splice site. Splicing at this site creates an mRNA of which 34 bp are deleted, which leads to a frameshift at amino acid arg545, immediately followed by a stop codon.


.0004   ADRENOLEUKODYSTROPHY

ABCD1, IVS8AS, G-A, -10, 8-BP INS
SNP: rs398123108, gnomAD: rs398123108, ClinVar: RCV000077961, RCV000414732, RCV000626568, RCV001000924, RCV002408605

In a patient with adrenoleukodystrophy (ALD; 300100), Kemp et al. (1995) found an insertion of 8 bp at the start of exon 9 of the ALD gene. Sequencing of the genomic fragment containing the 149-bp intron 8 revealed that the G at position -10 of the 3-prime splice acceptor site of exon 9 was substituted with an A. This mutation created an upstream novel splice acceptor site. The 8-bp insertion led to a frameshift at position arg622 and a premature stop codon 16 amino acids downstream.


.0005   ADRENOMYELONEUROPATHY

ABCD1, ARG389GLY
SNP: rs128624215, gnomAD: rs128624215, ClinVar: RCV000012048, RCV003488335

In a family in which 1 male had adrenomyeloneuropathy (AMN; see 300100), Krasemann et al. (1996) identified a de novo mutation in exon 3 of the ALD gene: a C-to-G transversion at nucleotide 1551 resulting in an arg389-to-gly substitution.


.0006   ADRENOLEUKODYSTROPHY

ABCD1, ASN148SER
SNP: rs128624216, ClinVar: RCV000012049, RCV001268346

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified an A-to-G transition at nucleotide 829 in exon 1 of the ALD gene, converting asparagine-148 to serine.


.0007   ADRENOLEUKODYSTROPHY

ABCD1, TYR174ASP
SNP: rs128624217, ClinVar: RCV000012050

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a T-to-G transversion at nucleotide 906 in exon 1 of the ALD gene, converting tyrosine-174 to aspartic acid. The mutation creates a new TaqI restriction site.


.0008   ADRENOLEUKODYSTROPHY

ABCD1, GLY266ARG
SNP: rs128624218, ClinVar: RCV000012051, RCV000723479, RCV001358196, RCV002415409

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a G-to-A transition at nucleotide 1182 in exon 1 of the ALD gene, converting glycine-266 to arginine.


.0009   ADRENOLEUKODYSTROPHY

ABCD1, ARG401GLN
SNP: rs128624219, ClinVar: RCV000012052, RCV001001636, RCV001781249

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a G-to-A transition at nucleotide 1588 in exon 3 of the ALD gene, converting arginine-401 to glutamine.


.0010   ADRENOLEUKODYSTROPHY

ABCD1, ARG418TRP
SNP: rs128624220, ClinVar: RCV000012053, RCV000518515

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a C-to-T transition at nucleotide 1638 in exon 4 of the ALD gene, converting arginine-418 to tryptophan. The patient's mother carried the same nucleotide substitution in heterozygous form.


.0011   ADRENOMYELONEUROPATHY

ABCD1, ARG464TER
SNP: rs128624221, ClinVar: RCV000012054, RCV001781250, RCV003415686

In 1 patient with Addison disease at age 10 years and adrenomyeloneuropathy (AMN; see 300100) at age 15 years, Fanen et al. (1994) identified a C-to-T transition at nucleotide 1776 in exon 4 of the ALD gene, converting arginine to a premature termination codon at residue 464. The mutation creates a new BglII restriction site.


.0012   ADRENOLEUKODYSTROPHY

ABCD1, 2-BP DEL, 1801AG
SNP: rs387906494, ClinVar: RCV000012055, RCV000516943, RCV004752700

In 3 unrelated patients with the classic childhood form of adrenoleukodystrophy (ALD; 300100), Barcelo et al. (1994) and Fuchs et al. (1994) identified a 2-bp (AG) deletion at nucleotides 1801-1802 in exon 5, leading to a frameshift after the first 471 amino acids and a premature termination codon. The predicted mutated protein would have 553 amino acids (192 residues less than the normal protein), losing both ATP binding sites.


.0013   ADRENOLEUKODYSTROPHY

ABCD1, GLU477TER
SNP: rs128624222, gnomAD: rs128624222, ClinVar: RCV000012056

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a G-to-T transition at nucleotide 1815 in exon 5 of the ALD gene, converting glutamic acid to a premature termination codon at residue 477.


.0014   ADRENOLEUKODYSTROPHY

ABCD1, SER515PHE
SNP: rs128624223, ClinVar: RCV000012057

Fuchs et al. (1994) studied 10 unrelated German patients with adrenoleukodystrophy (ALD; 300100) and identified a C-to-T transition at nucleotide 1930 in exon 6 of the ALD gene, converting serine-515 to phenylalanine.


.0015   ADRENOLEUKODYSTROPHY

ABCD1, 1-BP DEL, 1937C
SNP: rs387906495, ClinVar: RCV000012058

Fanen et al. (1994) identified a 1-bp deletion at nucleotide 1937 of the ALD gene, leading to a termination codon at position 557 in exon 6 and a truncated protein. The mutation was detected in the heterozygous mother of a boy who died at age 13 years from cerebral adrenoleukodystrophy (ALD; 300100).


.0016   ADRENOMYELONEUROPATHY

ABCD1, ARG518TRP
SNP: rs128624224, ClinVar: RCV000012059, RCV000723537, RCV001358358

In an adult patient who developed adrenomyeloneuropathy (AMN; see 300100) at age 27 years, Fanen et al. (1994) identified a C-to-T transition at nucleotide 1938 in exon 6 of the ALD gene, converting arginine-518 to tryptophan.


.0017   ADRENOMYELONEUROPATHY

ABCD1, IVS6DS, G-A, +1
SNP: rs1569541096, ClinVar: RCV000012060

Fanen et al. (1994) identified a G-to-A substitution at position 2020, which is the first nucleotide of the donor splice site of intron 6 of the ALD gene. The mutation was detected in an adult who developed adrenomyeloneuropathy (AMN; see 300100) at age 28 years and died at age 43 years from cerebral involvement. This family illustrates the marked clinical variation of adrenoleukodystrophy: 2 infantile cerebral cases, 1 pure adrenomyeloneuropathy case, and 1 Addison disease case were diagnosed among the brothers or nephews of this patient.


.0018   ADRENOLEUKODYSTROPHY

ABCD1, 2-BP DEL, 2177TA
SNP: rs2148398995, ClinVar: RCV000012061

In a family in which 2 brothers had cerebral adrenoleukodystrophy (ALD; 300100), one at age 7 years and the other at age 9 years, Fanen et al. (1994) identified a 2-bp (TA) deletion at nucleotide 2177 of the ALD gene, leading to a termination codon at position 599 in exon 8 and a truncated protein.


.0019   ADDISON DISEASE

ABCD1, SER606LEU
SNP: rs128624225, gnomAD: rs128624225, ClinVar: RCV000012062, RCV000180094, RCV000517966

In a patient who had Addison disease without neurologic involvement at 20 years of age, Fanen et al. (1994) identified a C-to-T transition at nucleotide 2203 in exon 8 of the ALD gene, converting serine-606 to leucine.


.0020   ADDISON DISEASE

ABCD1, 1-BP DEL, 2204G
SNP: rs2148399029, ClinVar: RCV000012063

In a family in which the affected propositus had isolated Addison disease at age 21 years, Fanen et al. (1994) identified a 1-bp (G) deletion at nucleotide 2204 of the ALD gene, leading to a termination codon at position 635 in exon 8 and a truncated protein.


.0021   ADRENOMYELONEUROPATHY

ABCD1, ARG617HIS
SNP: rs11146842, gnomAD: rs11146842, ClinVar: RCV000012064, RCV000723904

In a patient who developed adrenomyeloneuropathy (AMN; see 300100) with cerebral involvement at age 33 years, Fanen et al. (1994) identified a G-to-A transition at nucleotide 2236 in exon 8 of the ALD gene, converting arginine-617 to histidine. The mutation leads to a conservative change at the first amino acid of the Walker B motif. The mutation was absent in DNA from the patient's mother, who had normal plasma VLCFA levels (predicting a noncarrier status). Therefore, the arg617-to-his mutation presented by this patient is likely to be a de novo mutation.


.0022   ADRENOLEUKODYSTROPHY

ABCD1, ARG617CYS
SNP: rs4010613, gnomAD: rs4010613, ClinVar: RCV000012065, RCV001093003

Fanen et al. (1994) identified a C-to-T transition at nucleotide 2235 in exon 8 of the ALD gene, converting arginine-617 to cysteine. The mutation was discovered in a family in which the index case died of cerebral adrenoleukodystrophy (ALD; 300100) at age 9 years. DNA from this patient was not available for study, but the mutation was shown to be present in his heterozygous mother and sister and absent in his normal brother, sister, and aunt.


.0023   ADRENOLEUKODYSTROPHY

ABCD1, 3-BP DEL, 1258GAG, GLU291DEL
SNP: rs387906496, ClinVar: RCV000012066, RCV000675191

The glu291-to-lys mutation of the ALD gene (300371.0001) is a recognized cause of adrenoleukodystrophy (ALD; 300100). Kano et al. (1998) described deletion of codon 291 (GAG) in a Japanese family with a variety of phenotypes in affected individuals. Whereas the proband was classified as having a rare intermediate type of adult cerebral and cerebello-brainstem form of ALD, his younger brother and nephew had the childhood type of ALD. Another nephew was classified as having an adolescent form. At 47 years of age, the proband developed depression, personality change, forgetfulness, and carelessness. He was noted to be severely amotivational, apathetic, and irritable. These behavioral abnormalities resulted in occupational and social compromise and hospitalization at age 48. No skin pigmentation was noted. The level of tau (157140) in the proband's cerebrospinal fluid was as high as that of patients with Alzheimer disease (104300). His brain MRI showed bilateral abnormalities in the cerebellar hemispheres and brainstem, but not in the cerebral white matter, where marked reductions of cerebral blood flow and oxygen metabolism were clearly demonstrated by positron emission tomography. The proband's younger brother developed mental deterioration, inactiveness, impaired vision, slurring of speech, and gait disturbance at age 8. He died 1 year later of respiratory failure. Autopsy was performed in his case and in that of one of the nephews, who had onset of symptoms at age 7 and died at age 9. Autopsy in both showed massive demyelination of the cerebral white matter but sparing of the U-fibers, compatible with childhood ALD.


.0024   ADRENOLEUKODYSTROPHY

ABCD1, IVS8DS, G-A, +1
SNP: rs1569541198, ClinVar: RCV000012067

Guimaraes et al. (2001) found a splice site mutation in the ABCD1 gene which was associated with production of a small quantity of correctly spliced mRNA molecules and a small amount of ALD protein detected by Western blot analysis. The atypical and relatively mild early course of the patient was attributed to the existence of some normal ALDP. The patient was a 23-year-old man who had developed normally until the age of 9 years, when he was diagnosed with Addison disease. At that time, no neurologic involvement could be observed. Five years later, he was biochemically diagnosed with adrenoleukodystrophy (ALD; 300100); VLCFA levels were found to be increased in both plasma and skin fibroblasts. At the age of 21 years, muscular weakness and difficulty in walking led him to a new clinical evaluation; spastic paraparesis with neurophysiologic abnormalities with an altered spinal cord MRI and a normal cerebral MRI were found. Eighteen months later, the patient displayed a cerebral AMN subphenotype associated with an affected cerebellum. He was in a vegetative state at the time of report.


.0025   ADRENOLEUKODYSTROPHY

ABCD1, IVS1DS, G-A, -1
SNP: rs1569540743, ClinVar: RCV000012068

Guimaraes et al. (2001) described a 'leaky' splicing mutation in a patient with atypical adrenoleukodystrophy (ALD; 300100). The alteration was at the -1 position of the donor splice site of exon 1. The mutation resulted in the utilization of a cryptic 5-prime splice site within intron 1. Nevertheless, this change allowed for some correct splicing. Western blot analysis showed the existence of normal-migrating ALD protein. However, as expected, the levels of this protein were greatly decreased. The patient was a 44-year-old man who showed an AMN pure subphenotype of X-ALD. He was diagnosed with Addison disease at the age of 22 years. Ten years later spastic paraparesis was manifested and the biochemical diagnosis (increased VLCFA levels in plasma and fibroblasts) established him as an X-ALD patient.


.0026   ADRENOMYELONEUROPATHY

ABCD1, 26-BP DEL, NT369
SNP: rs387906497, ClinVar: RCV000012069

In a large kindred in which 22 members over 6 generations had adrenomyeloneuropathy (AMN; see 300100), O'Neill et al. (2001) identified a 26-bp deletion (nucleotides 369-394) in the N terminus of the ABCD1 gene, resulting in deletion of amino acids 1-65, including the translation initiation codon. In cells of affected members, the protein was found at reduced levels and appeared to localize normally within the cell, but beta-oxidative function was severely reduced to approximately 20% of normal. The kindred had a highly concordant phenotype with onset in the thirties or forties of a progressive gait disturbance, lower extremity spasticity, hyperreflexia, and occasional sensory abnormalities. The mutation segregated with the disease in 5 affected men and 7 affected women who were tested and was absent in 30 unaffected family members and 40 normal controls, suggesting X-linked dominant inheritance with 100% disease penetrance in female carriers.


See Also:

Aguilar et al. (1967); Di Chiro et al. (1980); Dodd et al. (1997); Hoefnagel et al. (1967); Lu et al. (1997); Moser et al. (1981); Moser et al. (1984); Naidu et al. (1988); Noetzel et al. (1987); O'Neill et al. (1981); O'Neill et al. (1982); O'Neill et al. (1982); Peckham et al. (1982); Penman (1960); Schaumburg et al. (1977); Schaumburg et al. (1975); Takano et al. (1999)

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Contributors:
Hilary J. Vernon - updated : 08/30/2024
Cassandra L. Kniffin - updated : 12/8/2009
George E. Tiller - updated : 6/5/2008
George E. Tiller - updated : 5/19/2008
George E. Tiller - updated : 5/21/2007
Marla J. F. O'Neill - updated : 10/25/2005
George E. Tiller - updated : 2/25/2005
Cassandra L. Kniffin - updated : 4/2/2003
Cassandra L. Kniffin - updated : 1/21/2003

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