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HSFA6B heat shock transcription factor A6B [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821854, updated on 19-Feb-2025

Summary

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Official Symbol
HSFA6B
Official Full Name
heat shock transcription factor A6B
Primary source
TAIR:AT3G22830
Locus tag
AT3G22830
See related
Araport:AT3G22830
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A6B; AT-HSFA6B; heat shock transcription factor A6B; heat shock transcription factor A6B
Summary
member of Heat Stress Transcription Factor (Hsf) family
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Genomic context

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See HSFA6B in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (8078789..8081059)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene auxin canalization protein (DUF828) Neighboring gene allergen-like protein Neighboring gene Chlorophyll A-B binding family protein Neighboring gene emp24/gp25L/p24 family/GOLD family protein Neighboring gene aluminum induced protein with YGL and LRDR motifs

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Heat Stress Factor HSFA6b Connects ABA Signaling and ABA-Mediated Heat Responses. Huang YC, et al. Plant Physiol, 2016 Oct. PMID 27493213, Free PMC Article
  2. CRISPR/Cas9 edited HSFA6a and HSFA6b of Arabidopsis thaliana offers ABA and osmotic stress insensitivity by modulation of ROS homeostasis. Wenjing W, et al. Plant Signal Behav, 2020 Dec 1. PMID 32936726, Free PMC Article
  3. Transcriptional regulation of nitrogen-associated metabolism and growth. Gaudinier A, et al. Nature, 2018 Nov. PMID 30356219
  4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
  5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. CRISPR/Cas9 edited HSFA6a and HSFA6b of Arabidopsis thaliana offers ABA and osmotic stress insensitivity by modulation of ROS homeostasis.
    Title: CRISPR/Cas9 edited HSFA6a and HSFA6b of Arabidopsis thaliana offers ABA and osmotic stress insensitivity by modulation of ROS homeostasis.
  2. Data show that heat shock transcription factor A6B (HSFA6b)was required for thermotolerance acquisition.
    Title: The Heat Stress Factor HSFA6b Connects ABA Signaling and ABA-Mediated Heat Responses.
Submit: New GeneRIF Correction

General gene information

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NM_113182.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
heat shock transcription factor A6B
NP_188922.1
  • heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    8078789..8081059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113182.2 → NP_188922.1  heat shock transcription factor A6B [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188922.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LUH8
    UniProtKB/TrEMBL
    A0A178VDE3, A0A5S9XER1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LUH8.1

Gene LinkOut

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