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Rps27a-ps24 ribosomal protein S27a, pseudogene 24 [ Rattus norvegicus (Norway rat) ]

Gene ID: 691609, updated on 17-Aug-2024

Summary

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Official Symbol
Rps27a-ps24provided by RGD
Official Full Name
ribosomal protein S27a, pseudogene 24provided by RGD
Primary source
RGD:1597284
See related
AllianceGenome:RGD:1597284
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
This locus was determined to be a processed pseudogene of Rps27a (GeneID:100912032) since it has a similar nucleotide sequence to the coding region of the parental gene, but the coding region is disrupted by indels. This locus contains only the exonic sequence relative to the parental gene. [provided by RefSeq, May 2015]
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Genomic context

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See Rps27a-ps24 in Genome Data Viewer
Location:
2q42
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (206711355..206711882)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (204026425..204026952)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (219059494..219060021)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120100923 Neighboring gene exostosin-like glycosyltransferase 2 Neighboring gene ribosomal protein L13, pseudogene 18 Neighboring gene vascular cell adhesion molecule 1 Neighboring gene uncharacterized LOC120100924

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042152.2 

    Range
    101..628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    206711355..206711882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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