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LOC4342198 sugar transport protein MST3-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4342198, updated on 16-Jul-2024

Summary

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Gene symbol
LOC4342198
Gene description
sugar transport protein MST3-like
Locus tag
OSNPB_070106200
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
MST3; OsMST3; OsJ_22802
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Genomic context

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See LOC4342198 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (356799..361460, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (349183..353684, complement)

Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene probable disease resistance protein At5g45440 Neighboring gene uncharacterized LOC4342196 Neighboring gene uncharacterized LOC4342197 Neighboring gene uncharacterized LOC107277213 Neighboring gene uncharacterized LOC107281735

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monosaccharide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monosaccharide transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sugar transport protein MST3
Names
B1317D11.119-1
B1317D11.119-2
LOC_Os07g01560
Monosaccharide transporter 3
P0617C02.124-1
P0617C02.124-2
Sugar transport protein MST3
Sugar:proton symporter MST3
putative glucose transport protein STP1
putative monosaccharide transport protein MST1
sugar carrier protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001402972.1 → NP_001389901.1  sugar transport protein MST3

    Status: VALIDATED

    Source sequence(s)
    AK099079, CB673274, CI085448, CI616627
    UniProtKB/Swiss-Prot
    Q7EZD7, Q7XAK7, Q9FRT5
    UniProtKB/TrEMBL
    A2YHD1

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

    Range
    356799..361460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7EZD7.1 GenPept UniProtKB/Swiss-Prot:Q7EZD7

Gene LinkOut

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Molecular Biology Databases
Research Materials