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CFL1P6 cofilin 1 pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 390996, updated on 4-Mar-2025

Summary

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Official Symbol
CFL1P6provided by HGNC
Official Full Name
cofilin 1 pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:34545
See related
AllianceGenome:HGNC:34545
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CFLP6
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Genomic context

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See CFL1P6 in Genome Data Viewer
Location:
1p36.22
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (10989810..10991829, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (10531054..10533073, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (11049867..11051886, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376735 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:10994223-10995188 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:10995189-10996154 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:10997150-10997734 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 155 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 256 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:11001673-11002238 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:11002239-11002802 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:11005721-11006524 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:11008047-11008548 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr1:11018518-11019287 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:11020057-11020826 Neighboring gene ciliated left-right organizer protein containing ZP-N domains Neighboring gene Sharpr-MPRA regulatory region 3012 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 156 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 157 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 257 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 258 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:11072454-11073421 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:11073783-11074029 Neighboring gene TAR DNA binding protein Neighboring gene MBL associated serine protease 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:11105801-11106633 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 159 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 160 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 161 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 259 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 260 Neighboring gene spermidine synthase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Common variants near TARDBP and EGR2 are associated with susceptibility to Ewing sarcoma. Postel-Vinay S, et al. Nat Genet, 2012 Feb 12. PMID 22327514

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Common variants near TARDBP and EGR2 are associated with susceptibility to Ewing sarcoma.
EBI GWAS Catalog

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • cofilin 1 (non-muscle) pseudogene 6
  • cofilin pseudogene 6

Clone Names

  • FLJ37833

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032826.2 

    Range
    101..2120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    10989810..10991829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    10531054..10533073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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