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LOC124906289 uncharacterized LOC124906289 [ Homo sapiens (human) ]

Gene ID: 124906289, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124906289
Gene description
uncharacterized LOC124906289
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124906289 in Genome Data Viewer
Location:
3q22.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (138899755..138915982, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (141640734..141657050, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14766 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 25 Neighboring gene Sharpr-MPRA regulatory region 9070 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:138562234-138562975 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:138581611-138582152 Neighboring gene Sharpr-MPRA regulatory region 8152 Neighboring gene CRISPRi-validated cis-regulatory element chr3.4087 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:138598027-138598906 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:138598907-138599785 Neighboring gene ATP synthase membrane subunit c locus 1 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14767 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14768 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20607 Neighboring gene Sharpr-MPRA regulatory region 3980 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:138663365-138663954 Neighboring gene long intergenic non-protein coding RNA 1391 Neighboring gene forkhead box L2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    138899755..138915982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007096114.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    141640734..141657050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073879.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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