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LOC124906010 uncharacterized LOC124906010 [ Homo sapiens (human) ]

Gene ID: 124906010, updated on 22-Oct-2024

Summary

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Gene symbol
LOC124906010
Gene description
uncharacterized LOC124906010
See related
Ensembl:ENSG00000228590
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124906010 in Genome Data Viewer
Location:
2p16.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (60402169..60439819, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (60407911..60445623, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MIR4432 host gene Neighboring gene uncharacterized LOC102724142 Neighboring gene microRNA 4432 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15803 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11509 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15804 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15805 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15806 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15807 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15808 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:60680131-60681128 Neighboring gene BCL11 transcription factor A Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr2:60703617-60704430 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:60708187-60708687 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:60711909-60712410 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:60712411-60712910 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:60720541-60721042 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:60721043-60721542 Neighboring gene NANOG hESC enhancer GRCh37_chr2:60724096-60724705 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11510 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15809 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15810 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15811 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15812 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11511 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:60758966-60759525 Neighboring gene VISTA enhancer hs957 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:60776677-60777449 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:60777450-60778222 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11513 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11514 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11515 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11516 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15814 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11517 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:60782673-60783281 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15815 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11518 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:60809095-60809244 Neighboring gene VISTA enhancer hs1142 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:60860521-60861233 Neighboring gene RNA, 7SL, cytoplasmic 361, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

General protein information

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Preferred Names
uncharacterized protein LOC124906010

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    60402169..60439819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047446573.1 → XP_047302529.1  uncharacterized protein LOC124906010 isoform X1

  2. XM_047446574.1 → XP_047302530.1  uncharacterized protein LOC124906010 isoform X2

    Related
    ENST00000730652.1

RNA

  1. XR_007086330.1 RNA Sequence

  2. XR_007086331.1 RNA Sequence

  3. XR_007086329.1 RNA Sequence

  4. XR_007086328.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    60407911..60445623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047443942.1 → XP_047299898.1  uncharacterized protein LOC124906010 isoform X1

  2. XM_047443943.1 → XP_047299899.1  uncharacterized protein LOC124906010 isoform X2

RNA

  1. XR_007072107.1 RNA Sequence

  2. XR_007072108.1 RNA Sequence

  3. XR_007072106.1 RNA Sequence

  4. XR_007072105.1 RNA Sequence

Nucleotide Protein
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