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HMGA2-AS2 HMGA2 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 124902955, updated on 16-Feb-2025

Summary

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Official Symbol
HMGA2-AS2provided by HGNC
Official Full Name
HMGA2 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:58191
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See HMGA2-AS2 in Genome Data Viewer
Location:
12q14.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (65939926..65948707, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:66155026-66155586 Neighboring gene Sharpr-MPRA regulatory region 15140 Neighboring gene ribosomal protein SA pseudogene 52 Neighboring gene NANOG hESC enhancer GRCh37_chr12:66172695-66173196 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:66175547-66176083 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:66192736-66193237 Neighboring gene Sharpr-MPRA regulatory region 869 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:66219383-66219990 Neighboring gene high mobility group AT-hook 2 Neighboring gene MPRA-validated peak1769 silencer Neighboring gene HMGA2 antisense RNA 1 Neighboring gene MPRA-validated peak1770 silencer Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:66285256-66286168 Neighboring gene hESC enhancers GRCh37_chr12:66289853-66290620 and GRCh37_chr12:66290621-66291388 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:66291389-66292155 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:66320206-66320716 Neighboring gene HNF4 motif-containing MPRA enhancer 102 Neighboring gene negCOR silencer S1 Neighboring gene long intergenic non-protein coding RNA 2425 Neighboring gene microRNA 6074

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000012.12 Chromosome 12 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_199056.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090673

  2. NR_199057.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090673

  3. NR_199058.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090673

  4. NR_199059.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090673

  5. NR_199060.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090673

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    65939926..65948707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007063351.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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