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LOC118055745 cyclin-T1-4-like [ Populus alba (white poplar) ]

Gene ID: 118055745, updated on 14-Dec-2024

Summary

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Gene symbol
LOC118055745
Gene description
cyclin-T1-4-like
Locus tag
D5086_0000264260
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus alba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC118055745 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023271079.1 (1284651..1291862)

NW_023271079.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 Neighboring gene uncharacterized LOC118055736 Neighboring gene uncharacterized LOC118055757 Neighboring gene sugar transport protein 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023271079 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription, elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-T1-4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM523922v1 Primary Assembly

Genomic

  1. NW_023271079.1 Reference ASM523922v1 Primary Assembly

    Range
    1284651..1291862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035067734.1 → XP_034923625.1  cyclin-T1-4-like isoform X2

    Conserved Domains (1) summary
    cl40454
    Location:155 → 278
    CYCLIN_SF; Cyclin box fold superfamily

  2. XM_035067723.1 → XP_034923614.1  cyclin-T1-4-like isoform X1

    UniProtKB/TrEMBL
    A0A4V6A3L9
    Conserved Domains (1) summary
    cl40454
    Location:155 → 278
    CYCLIN_SF; Cyclin box fold superfamily
Nucleotide Protein
Heading Accession and Version

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