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MTCO1P38 MT-CO1 pseudogene 38 [ Homo sapiens (human) ]

Gene ID: 107105274, updated on 4-Mar-2025

Summary

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Official Symbol
MTCO1P38provided by HGNC
Official Full Name
MT-CO1 pseudogene 38provided by HGNC
Primary source
HGNC:HGNC:52103
See related
AllianceGenome:HGNC:52103
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See MTCO1P38 in Genome Data Viewer
Location:
1q43
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (237940763..237941061)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (237351993..237352291)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (238104063..238104361)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ryanodine receptor 2 Neighboring gene microRNA 4428 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:237753258-237754457 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:237947411-237948610 Neighboring gene NANOG hESC enhancer GRCh37_chr1:238017684-238018245 Neighboring gene POTE ankyrin domain family, member F pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:238089816-238090316 Neighboring gene NANOG hESC enhancer GRCh37_chr1:238104193-238104856 Neighboring gene nuclear-encoded mitochondrial tRNA-Pro (TGG) 1-1 Neighboring gene MT-ND2 pseudogene 27 Neighboring gene zona pellucida glycoprotein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • mitochondrially encoded cytochrome c oxidase I pseudogene 38

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046592.1 

    Range
    101..399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    237940763..237941061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    237351993..237352291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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