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LOC105376645 uncharacterized LOC105376645 [ Homo sapiens (human) ]

Gene ID: 105376645, updated on 4-Mar-2025

Summary

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Gene symbol
LOC105376645
Gene description
uncharacterized LOC105376645
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376645 in Genome Data Viewer
Location:
11p11.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (44510112..44517170)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (44665491..44672548)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3272 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4650 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4651 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4652 Neighboring gene exostosin glycosyltransferase 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44199715-44200215 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:44218806-44220005 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44283363-44283862 Neighboring gene VISTA enhancer hs2090 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:44299108-44299425 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44307156-44308129 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44308130-44309102 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:44324475-44325020 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:44325021-44325566 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44331667-44332595 Neighboring gene ALX homeobox 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44356123-44356691 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44386509-44387008 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4653 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:44435693-44436892 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44448301-44449231 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:44487974-44488970 Neighboring gene uncharacterized LOC105376646 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44550187-44551103 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44556450-44556973 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44556974-44557496 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3273 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:44561345-44561951 Neighboring gene ribosomal protein L7a pseudogene 79

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    44510112..44517170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_931229.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    44665491..44672548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082015.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials