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LOC105375346 uncharacterized LOC105375346 [ Homo sapiens (human) ]

Gene ID: 105375346, updated on 4-Mar-2025

Summary

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Gene symbol
LOC105375346
Gene description
uncharacterized LOC105375346
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375346 in Genome Data Viewer
Location:
7q11.22
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (69544025..69580727)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (70766814..70803513)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901667 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:68915277-68916058 Neighboring gene RNA, U6 small nuclear 229, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:68922873-68923388 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:68983024-68983643 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26093 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18222 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18223 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18224 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26094 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:69073614-69074587 Neighboring gene NANOG hESC enhancer GRCh37_chr7:69075092-69075654 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26095 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26096 Neighboring gene Sharpr-MPRA regulatory region 1350 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26100 Neighboring gene Sharpr-MPRA regulatory region 8911 Neighboring gene activator of transcription and developmental regulator AUTS2 Neighboring gene NANOG hESC enhancer GRCh37_chr7:69209815-69210316 Neighboring gene cancer/testis associated transcript 66 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26101 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26103 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26102 Neighboring gene VISTA enhancer hs2315 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26104 Neighboring gene VISTA enhancer hs1660 Neighboring gene NANOG hESC enhancer GRCh37_chr7:69537097-69537598 Neighboring gene VISTA enhancer hs1425 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:69604114-69604315 Neighboring gene NANOG hESC enhancer GRCh37_chr7:69615911-69616412 Neighboring gene VISTA enhancer hs2316 Neighboring gene heart enhancer 21 Neighboring gene VISTA enhancer hs658 Neighboring gene VISTA enhancer hs2317 Neighboring gene VISTA enhancer hs2318 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26108 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:69813727-69814226 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:69857943-69858138 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26109 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:69881219-69881824 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:69881825-69882428 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:69917332-69917455 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:69961601-69962108 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:69969942-69971141 Neighboring gene uncharacterized LOC124901669

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    69544025..69580727
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_927652.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    70766814..70803513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077617.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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