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LOC105372140 uncharacterized LOC105372140 [ Homo sapiens (human) ]

Gene ID: 105372140, updated on 4-Mar-2025

Summary

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Gene symbol
LOC105372140
Gene description
uncharacterized LOC105372140
See related
Ensembl:ENSG00000301416
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372140 in Genome Data Viewer
Location:
18q21.31
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (57896233..57901943, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (58096432..58102126, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene ATPase phospholipid transporting 8B1 Neighboring gene uncharacterized LOC124904310 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:55443057-55444256 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:55470167-55470804 Neighboring gene Sharpr-MPRA regulatory region 4888 Neighboring gene MPRA-validated peak3165 silencer Neighboring gene Sharpr-MPRA regulatory region 13131 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13378 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13379 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13380 Neighboring gene ribosomal L24 domain containing 1 pseudogene 11 Neighboring gene NANOG hESC enhancer GRCh37_chr18:55523486-55524043 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:55561711-55562212 Neighboring gene MPRA-validated peak3167 silencer Neighboring gene long intergenic non-protein coding RNA 1897 Neighboring gene Sharpr-MPRA regulatory region 3246 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13381 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene 30

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    57896233..57901943 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_935521.2 RNA Sequence

    Related
    ENST00000778762.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    58096432..58102126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088211.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials