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LOC105369527 uncharacterized LOC105369527 [ Homo sapiens (human) ]

Gene ID: 105369527, updated on 4-Mar-2025

Summary

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Gene symbol
LOC105369527
Gene description
uncharacterized LOC105369527
See related
Ensembl:ENSG00000286731
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 5.6) See more
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Genomic context

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See LOC105369527 in Genome Data Viewer
Location:
11q23.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (120026753..120028995)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (120050103..120052347)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369526 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:119778209-119778712 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:119790465-119790964 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:119791966-119792466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:119792467-119792967 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:119806603-119807408 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:119813277-119814476 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_19319 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:119845938-119846620 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:119848775-119849649 Neighboring gene long intergenic non-protein coding RNA 2744 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:119884626-119885231 Neighboring gene NANOG hESC enhancer GRCh37_chr11:119893768-119894269 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_19353 Neighboring gene NANOG hESC enhancer GRCh37_chr11:119926297-119926798 Neighboring gene MPRA-validated peak1494 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:119932166-119933158 Neighboring gene uncharacterized LOC105378956 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:119952219-119953418 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:119967440-119968306 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5635 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:119994383-119994890 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:119995312-119996511 Neighboring gene uncharacterized LOC105369529 Neighboring gene tripartite motif containing 29

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    120026753..120028995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_948085.4 RNA Sequence

    Related
    ENST00000759260.1

  2. XR_948084.4 RNA Sequence

    Related
    ENST00000759265.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    120050103..120052347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081640.1 RNA Sequence

  2. XR_007081641.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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