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LOC101928081 uncharacterized LOC101928081 [ Homo sapiens (human) ]

Gene ID: 101928081, updated on 4-Mar-2025

Summary

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Gene symbol
LOC101928081
Gene description
uncharacterized LOC101928081
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.7), colon (RPKM 0.3) and 12 other tissues See more
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Genomic context

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See LOC101928081 in Genome Data Viewer
Location:
4q32.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (163110215..163119873)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (166458085..166467745)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377516 Neighboring gene NANOG hESC enhancer GRCh37_chr4:163636456-163637075 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22096 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_75656 Neighboring gene microRNA 4454 Neighboring gene Sharpr-MPRA regulatory region 7208 Neighboring gene nuclear assembly factor 1 ribonucleoprotein Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:164087187-164088054 Neighboring gene uncharacterized LOC105377517 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_75696 Neighboring gene mitochondrial ribosomal protein S5 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    163110215..163119873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_244745.4 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    166458085..166467745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007075115.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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