U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100420052 poly(rC) binding protein 2 pseudogene [ Homo sapiens (human) ]

Gene ID: 100420052, updated on 4-Mar-2025

Summary

Gene symbol
LOC100420052
Gene description
poly(rC) binding protein 2 pseudogene
See related
Ensembl:ENSG00000219384
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC100420052 in Genome Data Viewer
Location:
6p21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (45158846..45159531)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (44993645..44994330)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (45126583..45127268)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene SPT3 homolog, SAGA and STAGA complex component Neighboring gene ReSE screen-validated silencer GRCh37_chr6:44897835-44898036 Neighboring gene NUDT19 pseudogene 4 Neighboring gene MPRA-validated peak5818 silencer Neighboring gene MPRA-validated peak5819 silencer Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:45029844-45030504 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:45030505-45031165 Neighboring gene MPRA-validated peak5820 silencer Neighboring gene RNA binding motif protein 22 pseudogene 4 Neighboring gene MPRA-validated peak5821 silencer Neighboring gene microRNA 586 Neighboring gene MPRA-validated peak5822 silencer Neighboring gene RUNX2 P1 promoter region Neighboring gene MPRA-validated peak5825 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17265 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:45345603-45346146 Neighboring gene RUNX family transcription factor 2 Neighboring gene uncharacterized LOC124901324

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025938.1 

    Range
    101..786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    45158846..45159531
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    44993645..44994330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)