nsv3067020
- Organism: Homo sapiens
- Study:nstd141 (Rambo-Martin et al. 2018)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:5,600
- Publication(s):Rambo-Martin et al. 2018
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 264 SVs from 44 studies. See in: genome view
Overlapping variant regions from other studies: 264 SVs from 44 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3067020 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000021.9 | Chr21 | 19,195,884 | 19,201,483 |
| nsv3067020 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000021.8 | Chr21 | 20,568,202 | 20,573,801 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv14038527 | copy number loss | Oligo aCGH | Probe signal intensity |
| nssv14038662 | copy number loss | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14038527 | Remapped | Perfect | NC_000021.9:g.(?_1 9195884)_(19201483 _?)del | GRCh38.p12 | First Pass | NC_000021.9 | Chr21 | 19,195,884 | 19,201,483 |
| nssv14038662 | Remapped | Perfect | NC_000021.9:g.(?_1 9195884)_(19201483 _?)del | GRCh38.p12 | First Pass | NC_000021.9 | Chr21 | 19,195,884 | 19,201,483 |
| nssv14038527 | Submitted genomic | NC_000021.8:g.(?_2 0568202)_(20573801 _?)del | GRCh37 (hg19) | NC_000021.8 | Chr21 | 20,568,202 | 20,573,801 | ||
| nssv14038662 | Submitted genomic | NC_000021.8:g.(?_2 0568202)_(20573801 _?)del | GRCh37 (hg19) | NC_000021.8 | Chr21 | 20,568,202 | 20,573,801 |